Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 1.3e-246 855.9 424 100.0
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 2.3e-211 738.8 413 88.6
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 6.4e-209 730.7 424 85.8
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 1.9e-205 719.2 413 86.7
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 3.4e-202 708.4 430 83.0
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 6.6e-198 694.1 409 84.6
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 1.4e-168 596.7 413 74.6
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 1.4e-155 553.5 410 68.8
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 1.8e-155 553.1 410 67.8
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 3.1e-155 552.4 413 66.1
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 1.0e-153 547.4 406 68.7
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 1.9e-152 543.1 411 65.9
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 2.3e-150 536.2 394 67.0
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 5.1e-150 535.0 389 68.4
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 1.4e-147 526.9 380 68.7
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 3.1e-147 525.8 412 63.6
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 4.5e-146 521.9 377 68.4
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 5.9e-146 521.5 345 71.9
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 7.6e-146 521.2 366 68.9
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 1.7e-145 520.0 392 65.3
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 3.8e-145 518.8 412 63.6
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 6.5e-145 518.1 392 64.3
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 6.5e-145 518.1 392 64.3
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 1.1e-144 517.3 377 67.9
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 4.2e-144 515.4 398 65.6
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 7.2e-144 514.6 372 68.5
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 7.2e-144 514.6 413 62.0
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 1.2e-143 513.8 413 61.3
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 1.2e-143 513.8 412 63.6
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 6.1e-143 511.5 340 72.6
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 7.9e-143 511.1 427 62.8
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 1.0e-142 510.8 417 61.4
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 1.4e-142 510.4 413 62.2
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 3.9e-142 508.8 399 64.2
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 5.1e-142 508.4 348 70.4
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 5.1e-142 508.4 416 62.7
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 8.8e-142 507.7 342 71.6
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 8.8e-142 507.7 396 63.6
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 1.1e-141 507.3 389 64.5
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 1.5e-141 506.9 342 71.3
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 1.9e-141 506.5 419 63.0
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 5.7e-141 505.0 413 61.0
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 1.3e-140 503.8 342 69.3
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 1.7e-140 503.4 345 69.3
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 2.8e-140 502.7 385 65.5
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 2.8e-140 502.7 407 64.1
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 2.8e-140 502.7 403 62.5
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 4.8e-140 501.9 401 61.8
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 8.2e-140 501.1 349 68.2
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 1.1e-139 500.7 413 62.0
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 1.8e-139 500.0 347 68.3
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 4.1e-139 498.8 346 68.8
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 9.1e-139 497.7 423 60.0
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 9.1e-139 497.7 415 60.0
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 1.5e-138 496.9 397 62.2
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 1.5e-138 496.9 384 64.3
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 4.5e-138 495.4 340 68.8
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 5.9e-138 495.0 392 63.0
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 5.9e-138 495.0 392 63.0
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 5.9e-138 495.0 383 63.7
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 5.9e-138 495.0 422 61.4
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 1.0e-137 494.2 340 70.6
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 1.0e-137 494.2 376 64.4
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 1.0e-137 494.2 383 63.4
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 2.9e-137 492.7 342 68.1
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 5.0e-137 491.9 342 69.6
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 1.4e-136 490.3 415 59.5
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 1.4e-136 490.3 309 75.7
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 4.2e-136 488.8 415 60.0
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 4.2e-136 488.8 399 61.4
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 5.5e-136 488.4 414 61.1
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 7.2e-136 488.0 347 68.0
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 9.4e-136 487.6 412 59.7
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 1.2e-135 487.3 434 61.1
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 2.1e-135 486.5 374 64.2
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 3.6e-135 485.7 394 62.4
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 1.8e-134 483.4 410 61.0
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 1.8e-134 483.4 410 61.0
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 1.8e-134 483.4 400 60.0
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 1.5e-133 480.3 418 58.1
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 3.3e-133 479.2 423 58.4
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 3.3e-133 479.2 384 62.2
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 3.3e-133 479.2 336 68.2
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 5.7e-133 478.4 335 69.0
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 2.2e-132 476.5 406 59.6
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 2.8e-132 476.1 340 66.5
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 5.3e-131 471.9 324 73.1
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 3.2e-128 462.6 405 58.3
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 9.4e-128 461.1 321 68.8
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 9.7e-125 451.1 361 63.4
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 1.8e-123 446.8 346 62.7
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 2.6e-122 443.0 343 61.2
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 7.5e-117 424.9 296 68.9
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 1.8e-115 420.2 349 60.5
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 6.5e-113 411.8 356 57.0
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 3.0e-110 402.9 285 69.1
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 8.3e-108 394.8 315 66.0
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 2.0e-106 390.2 256 72.3
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 5.0e-105 385.6 248 73.4
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 1.9e-104 383.6 357 52.9
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 2.0e-101 373.6 249 71.9
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 7.0e-99 365.2 339 55.8
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 3.1e-94 349.7 271 65.7
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 1.2e-87 327.8 368 47.6
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 2.0e-85 320.5 347 48.7
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 3.2e-83 313.2 239 64.0
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 5.6e-80 302.4 422 39.6
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 7.1e-67 258.8 342 41.5
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 7.6e-61 238.8 184 62.5
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 3.9e-41 173.3 189 47.1
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 5.6e-40 169.5 125 62.4
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 4.5e-37 159.8 161 54.0
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 4.9e-36 156.4 159 50.9
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 3.2e-35 153.7 91 75.8
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 1.6e-34 151.4 101 69.3
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 4.3e-24 116.7 93 58.1
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 5.5e-19 99.8 89 56.2
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 1.0e-12 79.0 53 64.2
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 4.2e-11 73.6 93 45.2


User provided reference genes

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