Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2052.3 Capsicum annuum HOM05D000141 ORTHO05D011930 1.9e-60 235.7 125 100.0
CAN.G1237.15 Capsicum annuum HOM05D000141 ORTHO05D000780 3.8e-53 211.5 125 91.2
CAN.G2301.2 Capsicum annuum HOM05D000141 ORTHO05D011930 5.5e-52 207.6 125 88.8
CAN.G182.1 Capsicum annuum HOM05D000141 ORTHO05D000780 1.6e-51 206.1 125 89.6
CAN.G182.2 Capsicum annuum HOM05D000141 ORTHO05D000780 1.6e-51 206.1 125 89.6
CAN.G7886.1 Capsicum annuum HOM05D000141 ORTHO05D011930 4.7e-51 204.5 125 89.6
CAN.G9568.1 Capsicum annuum HOM05D000141 ORTHO05D011930 1.7e-45 186.0 125 83.2
CAN.G2032.1 Capsicum annuum HOM05D000141 ORTHO05D000780 5.0e-45 184.5 114 87.7
CAN.G4746.2 Capsicum annuum HOM05D000141 ORTHO05D011930 1.5e-44 183.0 119 82.4
CAN.G2301.1 Capsicum annuum HOM05D000141 ORTHO05D011930 1.6e-43 179.5 125 80.8
CAN.G182.3 Capsicum annuum HOM05D000141 ORTHO05D011930 7.5e-41 170.6 103 91.3
CAN.G2478.1 Capsicum annuum HOM05D000141 ORTHO05D011930 2.8e-40 168.7 103 89.3
Sopen04g008170 Solanum pennellii HOM05D000141 ORTHO05D000780 2.8e-40 168.7 126 77.0
Solyc04g016080.2 Solanum lycopersicum HOM05D000141 ORTHO05D000780 6.3e-40 167.5 126 77.0
CAN.G1784.8 Capsicum annuum HOM05D000141 ORTHO05D011930 1.1e-39 166.8 104 89.4
Peaxi162Scf00130g00518 Petunia axillaris HOM05D000141 ORTHO05D000780 1.1e-39 166.8 128 76.6
CAN.G1784.5 Capsicum annuum HOM05D000141 ORTHO05D011930 9.1e-39 163.7 103 89.3
Nitab4.5_0007721g0030 Nicotiana tabacum HOM05D000141 ORTHO05D000780 5.9e-38 161.0 126 73.8
CAN.G12411.1 Capsicum annuum HOM05D000141 ORTHO05D011930 3.8e-37 158.3 97 89.7
Nitab4.5_0000636g0110 Nicotiana tabacum HOM05D000141 ORTHO05D011930 7.2e-36 154.1 112 79.5
CAN.G4150.1 Capsicum annuum HOM05D000141 ORTHO05D011930 5.4e-31 137.9 88 86.4
PGSC0003DMG400027257 Solanum tuberosum HOM05D000141 ORTHO05D000780 2.0e-30 136.0 126 67.5
CAN.G2478.4 Capsicum annuum HOM05D000141 ORTHO05D011930 1.5e-28 129.8 85 83.5
Cc06_g17730 Coffea canephora HOM05D000141 ORTHO05D000780 7.5e-25 117.5 132 58.3
SalBow6G3399 Salvia bowleyana HOM05D000141 ORTHO05D000780 1.1e-23 113.6 110 64.5
SalBow6G3691 Salvia bowleyana HOM05D000141 ORTHO05D000780 1.1e-23 113.6 110 64.5
CAN.G676.23 Capsicum annuum HOM05D000141 ORTHO05D000780 1.9e-23 112.8 78 82.1
MD14G1074400 Malus domestica HOM05D000141 ORTHO05D000780 1.0e-21 107.1 129 52.7
Hma1.2p1_0788F.1_g218060 Hydrangea macrophylla HOM05D000141 ORTHO05D000780 3.9e-21 105.1 128 53.1
Prupe.7G055800 Prunus persica HOM05D000141 ORTHO05D000780 8.6e-21 104.0 130 51.5
Oeu033013.1 Olea europaea HOM05D000141 ORTHO05D000780 2.5e-20 102.4 129 52.7
QL07p001610 Quercus lobata HOM05D000141 ORTHO05D000780 4.7e-19 98.2 130 52.3
QL05p062269 Quercus lobata HOM05D000141 ORTHO05D000780 8.0e-19 97.4 130 52.3
RcHm_v2.0_Chr3g0483041 Rosa chinensis HOM05D000141 ORTHO05D000780 1.4e-18 96.7 128 50.8
TAR369G0815 Trochodendron aralioides HOM05D000141 ORTHO05D011930 1.4e-18 96.7 121 49.6
SGA_v2.0_scaffold105G30398 Striga asiatica HOM05D000141 ORTHO05D000780 2.3e-18 95.9 113 57.5
FAN09G2894 Fragaria x ananassa HOM05D000141 ORTHO05D000780 4.0e-18 95.1 128 51.6
MD12G1076000 Malus domestica HOM05D000141 ORTHO05D000780 6.8e-18 94.4 112 54.5
Potri.006G048600 Populus trichocarpa HOM05D000141 ORTHO05D000780 8.9e-18 94.0 134 49.3
CiPaw.09G039400 Carya illinoinensis HOM05D000141 ORTHO05D000780 2.6e-17 92.4 126 50.8
AUR62024474 Chenopodium quinoa HOM05D000141 ORTHO05D000780 2.6e-17 92.4 115 48.7
Dinv39627 Davidia involucrata HOM05D000141 ORTHO05D011930 2.6e-17 92.4 116 53.4
FvH4_6g24140 Fragaria vesca HOM05D000141 ORTHO05D000780 3.4e-17 92.0 129 51.2
CAN.G7460.1 Capsicum annuum HOM05D000141 ORTHO05D011930 4.4e-17 91.7 56 87.5
FAN14G3678 Fragaria x ananassa HOM05D000141 ORTHO05D000780 4.4e-17 91.7 115 53.9
QL07p001657 Quercus lobata HOM05D000141 ORTHO05D011930 9.8e-17 90.5 114 54.4
GSVIVG01033252001 Vitis vinifera HOM05D000141 ORTHO05D000780 9.8e-17 90.5 110 52.7
Lj1g0025747 Lotus japonicus HOM05D000141 ORTHO05D000780 1.3e-16 90.1 111 51.4
Medtr7g091290 Medicago truncatula HOM05D000141 ORTHO05D000780 1.3e-16 90.1 131 48.1
PGR004G2467 Punica granatum HOM05D000141 ORTHO05D000780 1.3e-16 90.1 133 48.9
Manes.08G053050 Manihot esculenta HOM05D000141 ORTHO05D000780 1.7e-16 89.7 112 52.7
Oeu062943.1 Olea europaea HOM05D000141 ORTHO05D000780 2.2e-16 89.4 103 57.3
Sabra06G0033900 Salix brachista HOM05D000141 ORTHO05D000780 3.7e-16 88.6 97 57.7
Lj2C386T5 Lonicera japonica HOM05D000141 ORTHO05D000780 4.9e-16 88.2 126 50.0
CSS0002874 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 6.4e-16 87.8 114 52.6
Haze_19824 Corylus avellana HOM05D000141 ORTHO05D000780 6.4e-16 87.8 130 46.2
Haze_19829 Corylus avellana HOM05D000141 ORTHO05D000780 6.4e-16 87.8 130 46.2
CSS0015830 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 2.4e-15 85.9 114 51.8
TPR.G18240 Trifolium pratense HOM05D000141 ORTHO05D000780 2.4e-15 85.9 132 43.9
Aa31LG3G2890 Aethionema arabicum HOM05D000141 ORTHO05D000780 3.2e-15 85.5 117 48.7
Hund24692 Selenicereus undatus HOM05D000141 ORTHO05D000780 3.2e-15 85.5 129 48.1
CSS0021973 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 4.1e-15 85.1 114 50.9
Rhsim04G0102700 Rhododendron simsii HOM05D000141 ORTHO05D000780 5.4e-15 84.7 89 62.9
AUR62026063 Chenopodium quinoa HOM05D000141 ORTHO05D000780 7.0e-15 84.3 115 47.8
Psat3g073920 Pisum sativum HOM05D000141 ORTHO05D000780 7.0e-15 84.3 126 46.8
TWI53G1155 Tripterygium wilfordii HOM05D000141 ORTHO05D000780 2.7e-14 82.4 126 46.8
THA.LOC104816416 Tarenaya hassleriana HOM05D000141 ORTHO05D000780 3.5e-14 82.0 123 46.3
Ca_08441_v3 Cicer arietinum L. HOM05D000141 ORTHO05D000780 4.6e-14 81.6 124 46.0
COL.COLO4_20030 Corchorus olitorius HOM05D000141 ORTHO05D000780 4.6e-14 81.6 113 49.6
TWI74G1537 Tripterygium wilfordii HOM05D000141 ORTHO05D000780 7.8e-14 80.9 127 49.6
CAN.G778.7 Capsicum annuum HOM05D000141 ORTHO05D000780 1.0e-13 80.5 49 89.8
Sp3g08570 Schrenkiella parvula HOM05D000141 ORTHO05D000780 1.0e-13 80.5 114 46.5
AL3G21640 Arabidopsis lyrata HOM05D000141 ORTHO05D000780 1.3e-13 80.1 115 44.3
AT3G10310 Arabidopsis thaliana HOM05D000141 ORTHO05D000780 1.3e-13 80.1 116 44.0
Aqoxy2G00217 Aquilegia oxysepala HOM05D000141 ORTHO05D000780 1.7e-13 79.7 108 52.8
arahy.Tifrunner.gnm1.ann1.JU456M Arachis hypogaea HOM05D000141 ORTHO05D000780 1.7e-13 79.7 111 50.5
Ciclev10004492m.g Citrus clementina HOM05D000141 ORTHO05D000780 1.7e-13 79.7 129 48.1
Thhalv10019993m.g Eutrema salsugineum HOM05D000141 ORTHO05D000780 1.7e-13 79.7 115 45.2
MELO3C020742.2 Cucumis melo HOM05D000141 ORTHO05D000780 2.3e-13 79.3 136 44.9
Duzib106G2056 Durio zibethinus HOM05D000141 ORTHO05D000780 2.3e-13 79.3 128 44.5
Glyma.03G134900 Glycine max HOM05D000141 ORTHO05D000780 2.3e-13 79.3 114 49.1
THA.LOC104804702 Tarenaya hassleriana HOM05D000141 ORTHO05D000780 3.0e-13 79.0 127 46.5
Migut.J01742 Erythranthe guttata HOM05D000141 ORTHO05D000780 3.9e-13 78.6 124 50.0
Eucgr.A02334 Eucalyptus grandis HOM05D000141 ORTHO05D000780 3.9e-13 78.6 132 46.2
arahy.Tifrunner.gnm1.ann1.SFU112 Arachis hypogaea HOM05D000141 ORTHO05D000780 5.1e-13 78.2 111 49.5
Thecc.05G150300 Theobroma cacao HOM05D000141 ORTHO05D000780 5.1e-13 78.2 112 50.0
Glyma.19G137500 Glycine max HOM05D000141 ORTHO05D000780 2.5e-12 75.9 111 46.8
DCAR_013606 Daucus carota HOM05D000141 ORTHO05D000780 1.2e-11 73.6 112 45.5
CARHR084790 Cardamine hirsuta HOM05D000141 ORTHO05D000780 1.6e-11 73.2 115 44.3
Carub.0003s0949 Capsella rubella HOM05D000141 ORTHO05D000780 3.6e-11 72.0 122 41.0
BcaNung06563 Brassica carinata HOM05D000141 ORTHO05D000780 4.7e-11 71.6 113 44.2
A05p38830 Brassica napus HOM05D000141 ORTHO05D000780 4.7e-11 71.6 113 42.5
BraA05t22674Z Brassica rapa HOM05D000141 ORTHO05D000780 4.7e-11 71.6 113 42.5
C05p57860 Brassica napus HOM05D000141 ORTHO05D000780 6.2e-11 71.2 113 42.5
CsaV3_4G022100 Cucumis sativus L. HOM05D000141 ORTHO05D000780 6.2e-11 71.2 103 47.6
Gohir.A01G192600 Gossypium hirsutum HOM05D000141 ORTHO05D000780 6.2e-11 71.2 115 46.1
BolC5t34441H Brassica oleracea HOM05D000141 ORTHO05D000780 8.1e-11 70.9 113 42.5
Sed0021099 Sechium edule HOM05D000141 ORTHO05D000780 8.1e-11 70.9 127 40.9
Zm00001eb122340 Zea mays HOM05D000141 ORTHO05D000780 1.1e-10 70.5 123 42.3
PSO339G3992 Papaver somniferum HOM05D000141 ORTHO05D000780 1.4e-10 70.1 120 45.8
VMungo1383G0247 Vigna mungo HOM05D000141 ORTHO05D000780 1.4e-10 70.1 127 43.3
Gorai.002G226000 Gossypium raimondii HOM05D000141 ORTHO05D000780 1.8e-10 69.7 115 45.2
CSS0022619 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 3.1e-10 68.9 114 45.6
CSS0033447 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 4.0e-10 68.6 89 52.8
Lalb_Chr25g0287241 Lupinus albus HOM05D000141 ORTHO05D000780 5.2e-10 68.2 111 40.5
Os01g0243100 Oryza sativa ssp. japonica HOM05D000141 ORTHO05D000780 5.2e-10 68.2 121 43.8
Lalb_Chr20g0110611 Lupinus albus HOM05D000141 ORTHO05D000780 8.9e-10 67.4 109 45.0
ECA236G0558 Erigeron canadensis HOM05D000141 ORTHO05D000780 1.2e-09 67.0 121 43.0
Nn2g15186 Nelumbo nucifera HOM05D000141 ORTHO05D000780 1.5e-09 66.6 122 41.8
Gohir.D01G177200 Gossypium hirsutum HOM05D000141 ORTHO05D000780 2.0e-09 66.2 115 44.3
PSO384G5070 Papaver somniferum HOM05D000141 ORTHO05D000780 2.0e-09 66.2 120 44.2
Phvul.001G130300 Phaseolus vulgaris HOM05D000141 ORTHO05D000780 3.4e-09 65.5 124 42.7
FAN05G1533 Fragaria x ananassa HOM05D000141 ORTHO05D000780 5.8e-09 64.7 85 48.2
Sc19g0006580 Simmondsia chinensis HOM05D000141 ORTHO05D000780 5.8e-09 64.7 117 44.4
CAN.G1784.4 Capsicum annuum HOM05D000141 ORTHO05D000780 1.3e-08 63.5 42 85.7
BcaC05g29478 Brassica carinata HOM05D000141 ORTHO05D000780 6.4e-08 61.2 138 37.7
BolC3t16679H Brassica oleracea HOM05D000141 ORTHO05D000780 2.4e-07 59.3 62 56.5
HanXRQChr10g0283351 Helianthus annuus HOM05D000141 ORTHO05D000780 1.6e-06 56.6 93 50.5
ATR0782G220 Amborella trichopoda HOM05D000141 ORTHO05D000780 2.1e-06 56.2 93 44.1


User provided reference genes

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