Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G204.14 Capsicum annuum HOM05D000626 ORTHO05D015997 5.2e-128 461.1 236 100.0
CAN.G529.47 Capsicum annuum HOM05D000043 ORTHO05D000600 3.1e-27 126.3 160 50.0
Solyc01g109410.4 Solanum lycopersicum HOM05D000626 ORTHO05D003868 3.9e-22 109.4 60 90.0
Sopen01g051600 Solanum pennellii HOM05D000626 ORTHO05D003868 3.9e-22 109.4 60 90.0
CAN.G322.113 Capsicum annuum HOM05D000626 ORTHO05D003868 1.5e-21 107.5 60 86.7
Peaxi162Scf00016g00944 Petunia axillaris HOM05D000626 ORTHO05D003868 9.5e-21 104.8 60 83.3
Nitab4.5_0008989g0040 Nicotiana tabacum HOM05D000626 ORTHO05D003868 1.2e-20 104.4 60 85.0
Nitab4.5_0001794g0020 Nicotiana tabacum HOM05D000626 ORTHO05D003868 2.8e-20 103.2 60 83.3
AUR62011357 Chenopodium quinoa HOM05D000626 ORTHO05D003868 6.2e-20 102.1 60 80.0
AUR62016705 Chenopodium quinoa HOM05D000626 ORTHO05D003868 1.1e-19 101.3 60 80.0
Hund06221 Selenicereus undatus HOM05D000626 ORTHO05D003868 1.1e-19 101.3 60 80.0
Dinv26800 Davidia involucrata HOM05D000626 ORTHO05D003868 1.4e-19 100.9 60 80.0
Dinv39947 Davidia involucrata HOM05D000626 ORTHO05D003868 1.4e-19 100.9 60 80.0
Actinidia25417 Actinidia chinensis HOM05D000626 ORTHO05D003868 1.8e-19 100.5 60 78.3
Actinidia36541 Actinidia chinensis HOM05D000626 ORTHO05D003868 1.8e-19 100.5 60 78.3
THA.LOC104826869 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 1.8e-19 100.5 60 81.7
Nn5g29507 Nelumbo nucifera HOM05D000626 ORTHO05D003868 3.1e-19 99.8 60 80.0
CSS0014885 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 4.0e-19 99.4 60 78.3
Nitab4.5_0000199g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 4.0e-19 99.4 60 76.7
Sed0006655 Sechium edule HOM05D000626 ORTHO05D003868 4.0e-19 99.4 60 76.7
MSTRG.16792 Avicennia marina HOM05D000626 ORTHO05D003868 5.2e-19 99.0 60 78.3
Gorai.013G052700 Gossypium raimondii HOM05D000626 ORTHO05D003868 5.2e-19 99.0 109 51.4
Manes.13G136200 Manihot esculenta HOM05D000626 ORTHO05D003868 5.2e-19 99.0 60 78.3
Glyma.11G120300 Glycine max HOM05D000626 ORTHO05D003868 8.9e-19 98.2 60 80.0
Glyma.12G045400 Glycine max HOM05D000626 ORTHO05D003868 8.9e-19 98.2 60 80.0
BcaB02g10001 Brassica carinata HOM05D000626 ORTHO05D003868 1.2e-18 97.8 60 76.7
BcaB04g20111 Brassica carinata HOM05D000626 ORTHO05D003868 1.2e-18 97.8 60 76.7
BcaB07g29659 Brassica carinata HOM05D000626 ORTHO05D003868 1.2e-18 97.8 60 76.7
BcaC06g34731 Brassica carinata HOM05D000626 ORTHO05D003868 1.2e-18 97.8 60 76.7
C07p25140 Brassica napus HOM05D000626 ORTHO05D003868 1.2e-18 97.8 60 76.7
BolC7t43044H Brassica oleracea HOM05D000626 ORTHO05D003868 1.2e-18 97.8 60 76.7
BraA09t36632Z Brassica rapa HOM05D000626 ORTHO05D003868 1.2e-18 97.8 60 76.7
Cpa.g.sc158.17 Carica papaya HOM05D000626 ORTHO05D003868 1.2e-18 97.8 64 71.9
Eucgr.G01893 Eucalyptus grandis HOM05D000626 ORTHO05D003868 1.2e-18 97.8 60 76.7
Lj5C200G5 Lonicera japonica HOM05D000626 ORTHO05D003868 1.2e-18 97.8 60 76.7
Prupe.8G102600 Prunus persica HOM05D000626 ORTHO05D003868 1.2e-18 97.8 60 76.7
Sp2g30020 Schrenkiella parvula HOM05D000626 ORTHO05D003868 1.2e-18 97.8 60 76.7
Sed0005165 Sechium edule HOM05D000626 ORTHO05D003868 1.2e-18 97.8 60 75.0
Aqoxy5G01696 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 1.5e-18 97.4 57 80.7
CDE01G0575 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 1.5e-18 97.4 60 76.7
Dinv23553 Davidia involucrata HOM05D000626 ORTHO05D003868 2.0e-18 97.1 60 75.0
MD10G1081300 Malus domestica HOM05D000626 ORTHO05D003868 2.0e-18 97.1 60 76.7
THA.LOC104819216 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 2.0e-18 97.1 60 76.7
BcaC04g23148 Brassica carinata HOM05D000626 ORTHO05D003868 2.6e-18 96.7 60 75.0
A07p17280 Brassica napus HOM05D000626 ORTHO05D003868 2.6e-18 96.7 60 75.0
C09p11660 Brassica napus HOM05D000626 ORTHO05D003868 2.6e-18 96.7 60 75.0
BolC9t54060H Brassica oleracea HOM05D000626 ORTHO05D003868 2.6e-18 96.7 60 75.0
BraA07t29454Z Brassica rapa HOM05D000626 ORTHO05D003868 2.6e-18 96.7 60 75.0
HanXRQChr15g0487501 Helianthus annuus HOM05D000626 ORTHO05D003868 2.6e-18 96.7 60 76.7
GSVIVG01031917001 Vitis vinifera HOM05D000626 ORTHO05D003868 2.6e-18 96.7 60 73.3
Atru.chr3.513 Acer truncatum HOM05D000626 ORTHO05D003868 3.4e-18 96.3 60 75.0
Aqoxy6G01025 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 3.4e-18 96.3 60 75.0
CANSAT01G0918 Cannabis sativa HOM05D000626 ORTHO05D003868 3.4e-18 96.3 60 71.7
ECA232G3839 Erigeron canadensis HOM05D000626 ORTHO05D003868 3.4e-18 96.3 60 76.7
Lj4C195G12 Lonicera japonica HOM05D000626 ORTHO05D003868 3.4e-18 96.3 60 75.0
MD05G1070400 Malus domestica HOM05D000626 ORTHO05D003868 3.4e-18 96.3 60 76.7
Oeu035116.1 Olea europaea HOM05D000626 ORTHO05D003868 3.4e-18 96.3 60 75.0
Phvul.011G047300 Phaseolus vulgaris HOM05D000626 ORTHO05D003868 3.4e-18 96.3 60 78.3
PGR042G1683 Punica granatum HOM05D000626 ORTHO05D003868 3.4e-18 96.3 60 76.7
VMungo1127G0953 Vigna mungo HOM05D000626 ORTHO05D003868 3.4e-18 96.3 60 78.3
Aa31LG1G15220 Aethionema arabicum HOM05D000626 ORTHO05D003868 4.4e-18 95.9 60 73.3
AT5G66680 Arabidopsis thaliana HOM05D000626 ORTHO05D003868 4.4e-18 95.9 60 75.0
Carub.0008s2782 Capsella rubella HOM05D000626 ORTHO05D003868 4.4e-18 95.9 60 75.0
CARHR281040 Cardamine hirsuta HOM05D000626 ORTHO05D003868 4.4e-18 95.9 60 75.0
Thhalv10004242m.g Eutrema salsugineum HOM05D000626 ORTHO05D003868 4.4e-18 95.9 60 75.0
Hma1.2p1_0066F.1_g036710 Hydrangea macrophylla HOM05D000626 ORTHO05D003868 4.4e-18 95.9 60 73.3
Medtr4g069240 Medicago truncatula HOM05D000626 ORTHO05D003868 4.4e-18 95.9 60 76.7
arahy.Tifrunner.gnm1.ann1.GNS53T Arachis hypogaea HOM05D000626 ORTHO05D003868 5.8e-18 95.5 60 75.0
arahy.Tifrunner.gnm1.ann1.NL7PFA Arachis hypogaea HOM05D000626 ORTHO05D003868 5.8e-18 95.5 60 75.0
Cpa.g.sc62.112 Carica papaya HOM05D000626 ORTHO05D003868 5.8e-18 95.5 60 75.0
ClCG09G017810 Citrullus lanatus HOM05D000626 ORTHO05D003868 5.8e-18 95.5 60 73.3
SGA_v2.0_scaffold33G13424 Striga asiatica HOM05D000626 ORTHO05D003868 5.8e-18 95.5 60 75.0
TWI31G0747 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 5.8e-18 95.5 60 73.3
TWI53G0930 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 5.8e-18 95.5 60 75.0
GSVIVG01019024001 Vitis vinifera HOM05D000626 ORTHO05D003868 5.8e-18 95.5 60 73.3
Ah.01g019620 Amaranthus hybridus HOM05D000626 ORTHO05D003868 7.5e-18 95.1 60 73.3
A09p09850 Brassica napus HOM05D000626 ORTHO05D003868 7.5e-18 95.1 60 75.0
Ca_20850_v3 Cicer arietinum L. HOM05D000626 ORTHO05D003868 7.5e-18 95.1 60 73.3
Lj3g0026150 Lotus japonicus HOM05D000626 ORTHO05D003868 7.5e-18 95.1 60 76.7
SalBow5G3169 Salvia bowleyana HOM05D000626 ORTHO05D003868 7.5e-18 95.1 60 73.3
vmacro02136 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 7.5e-18 95.1 60 73.3
CsaV3_2G014400 Cucumis sativus L. HOM05D000626 ORTHO05D003868 9.8e-18 94.7 60 73.3
Duzib132G0298 Durio zibethinus HOM05D000626 ORTHO05D003868 9.8e-18 94.7 60 75.0
Gohir.D13G047000 Gossypium hirsutum HOM05D000626 ORTHO05D003868 9.8e-18 94.7 60 75.0
Oeu032561.1 Olea europaea HOM05D000626 ORTHO05D003868 9.8e-18 94.7 60 73.3
TWI09G1554 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 9.8e-18 94.7 60 75.0
TAR376G0372 Trochodendron aralioides HOM05D000626 ORTHO05D003868 9.8e-18 94.7 60 75.0
Ah.03g139660 Amaranthus hybridus HOM05D000626 ORTHO05D003868 1.3e-17 94.4 60 71.7
AL8G44800 Arabidopsis lyrata HOM05D000626 ORTHO05D003868 1.3e-17 94.4 60 73.3
Ciclev10028484m.g Citrus clementina HOM05D000626 ORTHO05D003868 1.3e-17 94.4 60 75.0
Cc07_g09070 Coffea canephora HOM05D000626 ORTHO05D003868 1.3e-17 94.4 60 71.7
Migut.H00194 Erythranthe guttata HOM05D000626 ORTHO05D003868 1.3e-17 94.4 60 71.7
Manes.15G148600 Manihot esculenta HOM05D000626 ORTHO05D003868 1.3e-17 94.4 60 70.0
MSTRG.23557 Avicennia marina HOM05D000626 ORTHO05D003868 1.7e-17 94.0 60 70.0
CiPaw.05G061300 Carya illinoinensis HOM05D000626 ORTHO05D003868 1.7e-17 94.0 60 73.3
COL.COLO4_32455 Corchorus olitorius HOM05D000626 ORTHO05D003868 1.7e-17 94.0 60 75.0
Haze_02415 Corylus avellana HOM05D000626 ORTHO05D003868 1.7e-17 94.0 60 73.3
Gohir.A13G048600 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.7e-17 94.0 60 71.7
QL11p042537 Quercus lobata HOM05D000626 ORTHO05D003868 1.7e-17 94.0 60 71.7
SGA_v2.0_scaffold276G46656 Striga asiatica HOM05D000626 ORTHO05D003868 1.7e-17 94.0 60 73.3
Atru.chr5.2949 Acer truncatum HOM05D000626 ORTHO05D003868 2.2e-17 93.6 60 73.3
Actinidia00502 Actinidia chinensis HOM05D000626 ORTHO05D003868 2.2e-17 93.6 60 68.3
EL10Ac9g21756 Beta vulgaris HOM05D000626 ORTHO05D003868 2.2e-17 93.6 60 71.7
Prupe.7G148700 Prunus persica HOM05D000626 ORTHO05D003868 2.2e-17 93.6 60 73.3
TPR.G28529 Trifolium pratense HOM05D000626 ORTHO05D003868 2.2e-17 93.6 60 73.3
Potri.007G031000 Populus trichocarpa HOM05D000626 ORTHO05D003868 2.9e-17 93.2 60 73.3
Sc18g0004660 Simmondsia chinensis HOM05D000626 ORTHO05D003868 2.9e-17 93.2 60 73.3
unitig_37.g12815 Utricularia gibba HOM05D000626 ORTHO05D003868 2.9e-17 93.2 60 70.0
EL10Ac6g14893 Beta vulgaris HOM05D000626 ORTHO05D003868 3.7e-17 92.8 60 70.0
Manes.12G098300 Manihot esculenta HOM05D000626 ORTHO05D003868 3.7e-17 92.8 60 71.7
RcHm_v2.0_Chr6g0262991 Rosa chinensis HOM05D000626 ORTHO05D003868 3.7e-17 92.8 60 71.7
Cc02_g17860 Coffea canephora HOM05D000626 ORTHO05D003868 4.9e-17 92.4 60 71.7
FvH4_2g08200 Fragaria vesca HOM05D000626 ORTHO05D003868 4.9e-17 92.4 60 70.0
FAN24G1839 Fragaria x ananassa HOM05D000626 ORTHO05D003868 4.9e-17 92.4 60 70.0
FAN27G0454 Fragaria x ananassa HOM05D000626 ORTHO05D003868 4.9e-17 92.4 60 70.0
Psat7g141000 Pisum sativum HOM05D000626 ORTHO05D003868 4.9e-17 92.4 60 73.3
AUR62003200 Chenopodium quinoa HOM05D000626 ORTHO05D003868 6.4e-17 92.0 60 70.0
AUR62008017 Chenopodium quinoa HOM05D000626 ORTHO05D003868 6.4e-17 92.0 60 70.0
FAN15G2364 Fragaria x ananassa HOM05D000626 ORTHO05D003868 6.4e-17 92.0 60 68.3
FAN20G2380 Fragaria x ananassa HOM05D000626 ORTHO05D003868 6.4e-17 92.0 60 70.0
Lalb_Chr01g0002691 Lupinus albus HOM05D000626 ORTHO05D003868 6.4e-17 92.0 60 73.3
Thecc.01G041600 Theobroma cacao HOM05D000626 ORTHO05D003868 6.4e-17 92.0 60 73.3
COL.COLO4_22139 Corchorus olitorius HOM05D000626 ORTHO05D003868 8.3e-17 91.7 60 70.0
Duzib264G0072 Durio zibethinus HOM05D000626 ORTHO05D003868 8.3e-17 91.7 60 71.7
DCAR_017221 Daucus carota HOM05D000626 ORTHO05D003868 1.1e-16 91.3 60 71.7
Gohir.A04G117400 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.1e-16 91.3 60 71.7
Mapoly0103s0006 Marchantia polymorpha HOM05D000626 ORTHO05D003868 1.1e-16 91.3 58 74.1
Potri.005G127000 Populus trichocarpa HOM05D000626 ORTHO05D003868 1.1e-16 91.3 60 71.7
Sabra07G0026800 Salix brachista HOM05D000626 ORTHO05D003868 1.1e-16 91.3 60 71.7
Lalb_Chr03g0025801 Lupinus albus HOM05D000626 ORTHO05D003868 1.4e-16 90.9 60 71.7
SalBow6G3366 Salvia bowleyana HOM05D000626 ORTHO05D003868 1.4e-16 90.9 60 70.0
Gohir.D04G159100 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.9e-16 90.5 60 71.7
Gorai.012G146500 Gossypium raimondii HOM05D000626 ORTHO05D003868 1.9e-16 90.5 60 71.7
HPP92_010187 Vanilla planifolia HOM05D000626 ORTHO05D003868 1.9e-16 90.5 60 70.0
AagrBONN_evm.TU.Sc2ySwM_117.2383 Anthoceros agrestis HOM05D000626 ORTHO05D003868 2.4e-16 90.1 58 72.4
CSS0006874 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 2.4e-16 90.1 58 70.7
FvH4_6g12900 Fragaria vesca HOM05D000626 ORTHO05D003868 2.4e-16 90.1 60 68.3
Lj2C447T14 Lonicera japonica HOM05D000626 ORTHO05D003868 2.4e-16 90.1 58 72.4
MD15G1269000 Malus domestica HOM05D000626 ORTHO05D003868 2.4e-16 90.1 60 70.0
Zm00001eb303200 Zea mays HOM05D000626 ORTHO05D003868 2.4e-16 90.1 60 70.0
Pp3c24_6930 Physcomitrium patens HOM05D000626 ORTHO05D003868 3.2e-16 89.7 58 70.7
Thecc.02G122300 Theobroma cacao HOM05D000626 ORTHO05D003868 4.1e-16 89.4 60 71.7
Zm00001eb095330 Zea mays HOM05D000626 ORTHO05D003868 4.1e-16 89.4 60 70.0
Nitab4.5_0022318g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 5.4e-16 89.0 54 74.1
PSO541G5997 Papaver somniferum HOM05D000626 ORTHO05D003868 5.4e-16 89.0 60 68.3
PSO675G2926 Papaver somniferum HOM05D000626 ORTHO05D003868 5.4e-16 89.0 60 68.3
Peaxi162Scf00684g00567 Petunia axillaris HOM05D000626 ORTHO05D003868 7.1e-16 88.6 54 74.1
ATR0733G160 Amborella trichopoda HOM05D000626 ORTHO05D003868 9.2e-16 88.2 60 68.3
FAN09G2415 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.2e-15 87.8 60 66.7
FvH4_4g13600 Fragaria vesca HOM05D000626 ORTHO05D003868 3.5e-15 86.3 60 65.0
Hund14135 Selenicereus undatus HOM05D000626 ORTHO05D003868 1.7e-14 84.0 60 61.7
SMO358G0537 Selaginella moellendorffii HOM05D000626 ORTHO05D003868 3.9e-14 82.8 58 65.5
CBR_g28880 Chara braunii HOM05D000626 ORTHO05D003868 4.0e-11 72.8 58 58.6
CDE02G0645 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 6.8e-11 72.0 45 71.1
CiPaw.16G057500 Carya illinoinensis HOM05D000626 ORTHO05D003868 1.2e-10 71.2 59 61.0
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 1.5e-10 70.9 63 57.1
TWI15G0235 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 2.0e-10 70.5 68 54.4
HPP92_010239 Vanilla planifolia HOM05D000626 ORTHO05D003868 2.9e-09 66.6 45 64.4
SGA_v2.0_scaffold58G20567 Striga asiatica HOM05D000626 ORTHO05D003868 1.1e-08 64.7 47 68.1
FAN04G0450 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.9e-08 63.9 60 53.3
Gohir.A07G207250 Gossypium hirsutum HOM05D000626 ORTHO05D003868 4.1e-08 62.8 41 70.7
MSTRG.13975 Avicennia marina HOM05D018684 ORTHO05D015997 5.4e-08 62.4 52 65.4
Duzib052G0942 Durio zibethinus HOM05D000626 ORTHO05D003868 2.1e-07 60.5 38 73.7
Lsat_1_v5_gn_4_144441 Lactuca sativa HOM05D000626 ORTHO05D003868 2.7e-07 60.1 47 63.8
TAR628G0085 Trochodendron aralioides HOM05D000626 ORTHO05D003868 2.7e-07 60.1 37 73.0
Cre14.g614100 Chlamydomonas reinhardtii HOM05D000626 ORTHO05D003868 6.0e-07 58.9 58 44.8
SGA_v2.0_scaffold22G09912 Striga asiatica HOM05D018684 ORTHO05D015997 6.0e-07 58.9 44 70.5
A02p44450 Brassica napus HOM05D000626 ORTHO05D003868 1.3e-06 57.8 67 49.3
BraA02t09362Z Brassica rapa HOM05D000626 ORTHO05D003868 1.3e-06 57.8 67 49.3
SGA_v2.0_scaffold88G27306 Striga asiatica HOM05D018684 ORTHO05D015997 3.0e-06 56.6 44 68.2


User provided reference genes

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