Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G20378.1 Capsicum annuum HOM05D002887 ORTHO05D003159 5.2e-72 274.2 136 100.0
CAN.G623.95 Capsicum annuum HOM05D002887 ORTHO05D003159 7.3e-66 253.8 136 95.6
CAN.G943.9 Capsicum annuum HOM05D002887 ORTHO05D003159 2.8e-65 251.9 136 94.9
CAN.G943.13 Capsicum annuum HOM05D002887 ORTHO05D003159 6.4e-62 240.7 136 90.4
CAN.G2325.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.4e-61 239.6 136 90.4
CAN.G943.16 Capsicum annuum HOM05D002887 ORTHO05D003159 9.9e-55 216.9 136 83.8
CAN.G623.102 Capsicum annuum HOM05D002887 ORTHO05D003159 1.7e-54 216.1 136 83.1
CAN.G943.18 Capsicum annuum HOM05D002887 ORTHO05D003159 3.0e-51 205.3 136 78.7
CAN.G4473.2 Capsicum annuum HOM05D002887 ORTHO05D003159 5.6e-50 201.1 115 88.7
CAN.G4473.1 Capsicum annuum HOM05D002887 ORTHO05D003159 2.8e-49 198.7 132 78.0
CAN.G623.96 Capsicum annuum HOM05D002887 ORTHO05D003159 4.0e-48 194.9 135 74.8
CAN.G623.98 Capsicum annuum HOM05D002887 ORTHO05D003159 3.7e-41 171.8 121 73.6
CAN.G623.85 Capsicum annuum HOM05D002887 ORTHO05D003159 4.0e-40 168.3 103 83.5
CAN.G623.86 Capsicum annuum HOM05D002887 ORTHO05D003159 5.3e-40 167.9 125 71.2
CAN.G623.87 Capsicum annuum HOM05D002887 ORTHO05D003159 1.7e-38 162.9 132 69.7
CAN.G943.17 Capsicum annuum HOM05D002887 ORTHO05D003159 1.7e-38 162.9 132 69.7
CAN.G623.99 Capsicum annuum HOM05D002887 ORTHO05D003159 2.2e-38 162.5 102 83.3
CAN.G623.83 Capsicum annuum HOM05D002887 ORTHO05D003159 4.9e-38 161.4 132 68.9
CAN.G943.7 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-37 160.2 102 82.4
CAN.G943.15 Capsicum annuum HOM05D002887 ORTHO05D003159 2.4e-37 159.1 132 68.2
CAN.G623.89 Capsicum annuum HOM05D002887 ORTHO05D003159 2.7e-36 155.6 102 80.4
CAN.G943.12 Capsicum annuum HOM05D002887 ORTHO05D003159 2.7e-36 155.6 102 80.4
CAN.G943.10 Capsicum annuum HOM05D002887 ORTHO05D003159 1.8e-35 152.9 102 79.4
CAN.G623.97 Capsicum annuum HOM05D002887 ORTHO05D003159 3.7e-33 145.2 152 57.9
CAN.G943.14 Capsicum annuum HOM05D002887 ORTHO05D003159 5.3e-32 141.4 135 60.0
CAN.G7707.1 Capsicum annuum HOM05D002887 ORTHO05D003159 7.6e-31 137.5 132 59.8
CAN.G623.93 Capsicum annuum HOM05D002887 ORTHO05D003159 2.9e-30 135.6 81 81.5
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 1.3e-27 126.7 99 65.7
Nitab4.5_0001235g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 2.3e-27 125.9 102 64.7
Nitab4.5_0000294g0200 Nicotiana tabacum HOM05D002887 ORTHO05D003159 1.9e-26 122.9 102 62.7
PGSC0003DMG400022247 Solanum tuberosum HOM05D002887 ORTHO05D003159 9.7e-26 120.6 102 65.7
Solyc07g066240.3 Solanum lycopersicum HOM05D002887 ORTHO05D003159 4.8e-25 118.2 102 64.7
Sopen07g034420 Solanum pennellii HOM05D002887 ORTHO05D003159 1.4e-24 116.7 102 63.7
Peaxi162Scf00232g00091 Petunia axillaris HOM05D002887 ORTHO05D003159 2.0e-23 112.8 102 59.8
Dinv19635 Davidia involucrata HOM05D002887 ORTHO05D003159 4.3e-18 95.1 118 45.8
CAN.G943.19 Capsicum annuum HOM05D002887 ORTHO05D003159 3.1e-16 89.0 53 79.2
AL1G63640 Arabidopsis lyrata HOM05D002887 ORTHO05D003159 1.0e-14 84.0 110 44.5
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 1.7e-14 83.2 110 45.5
AT1G55590 Arabidopsis thaliana HOM05D002887 ORTHO05D003159 3.8e-14 82.0 107 44.9
Thhalv10011328m.g Eutrema salsugineum HOM05D002887 ORTHO05D003159 8.5e-14 80.9 110 42.7
BcaC08g43637 Brassica carinata HOM05D002887 ORTHO05D003159 1.1e-13 80.5 110 42.7
A06p00120 Brassica napus HOM05D002887 ORTHO05D003159 1.1e-13 80.5 110 42.7
C06p10530 Brassica napus HOM05D002887 ORTHO05D003159 1.1e-13 80.5 110 42.7
BolC6t36133H Brassica oleracea HOM05D002887 ORTHO05D003159 1.1e-13 80.5 110 42.7
BraA06t23230Z Brassica rapa HOM05D002887 ORTHO05D003159 1.1e-13 80.5 110 42.7
Carub.0001s4411 Capsella rubella HOM05D002887 ORTHO05D003159 1.1e-13 80.5 110 44.5
MBI14_g10260_MAGBIO Magnolia biondii HOM05D002887 ORTHO05D003159 2.5e-13 79.3 91 45.1
Sp1g41210 Schrenkiella parvula HOM05D002887 ORTHO05D003159 2.5e-13 79.3 110 43.6
TWI39G1273 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 4.2e-13 78.6 110 41.8
CSS0039257 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 7.2e-13 77.8 91 46.2
CSS0049070 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 7.2e-13 77.8 91 46.2
CAN.G623.103 Capsicum annuum HOM05D002887 ORTHO05D003159 7.2e-13 77.8 53 73.6
Aa31LG10G620 Aethionema arabicum HOM05D002887 ORTHO05D003159 9.4e-13 77.4 118 38.1
Oeu052878.1 Olea europaea HOM05D002887 ORTHO05D003159 1.6e-12 76.6 91 48.4
Cc05_g15820 Coffea canephora HOM05D002887 ORTHO05D003159 2.1e-12 76.3 91 46.2
Rhsim04G0006800 Rhododendron simsii HOM05D002887 ORTHO05D003159 2.7e-12 75.9 108 42.6
ECA236G4850 Erigeron canadensis HOM05D002887 ORTHO05D003159 4.7e-12 75.1 115 40.0
HanXRQChr11g0335231 Helianthus annuus HOM05D002887 ORTHO05D003159 4.7e-12 75.1 110 43.6
Haze_09925 Corylus avellana HOM05D002887 ORTHO05D003159 1.0e-11 73.9 107 39.3
Actinidia27042 Actinidia chinensis HOM05D002887 ORTHO05D003159 2.3e-11 72.8 108 39.8
vmacro09794 Vaccinium macrocarpon HOM05D002887 ORTHO05D003159 2.3e-11 72.8 108 41.7
Cfa016970 Carpinus fangiana HOM05D002887 ORTHO05D003159 3.9e-11 72.0 86 41.9
MSTRG.14532 Avicennia marina HOM05D002887 ORTHO05D003159 5.1e-11 71.6 91 47.3
Manes.06G049300 Manihot esculenta HOM05D002887 ORTHO05D003159 6.7e-11 71.2 107 42.1
Prupe.6G036600 Prunus persica HOM05D002887 ORTHO05D003159 6.7e-11 71.2 94 44.7
QL08p000165 Quercus lobata HOM05D002887 ORTHO05D003159 6.7e-11 71.2 107 39.3
GSVIVG01014858001 Vitis vinifera HOM05D002887 ORTHO05D003159 6.7e-11 71.2 91 42.9
Lj1C902G8 Lonicera japonica HOM05D002887 ORTHO05D003159 1.1e-10 70.5 91 48.4
MD11G1047600 Malus domestica HOM05D002887 ORTHO05D003159 1.5e-10 70.1 110 38.2
Sed0024070 Sechium edule HOM05D002887 ORTHO05D003159 1.5e-10 70.1 109 39.4
ECA236G2003 Erigeron canadensis HOM05D002887 ORTHO05D003159 2.0e-10 69.7 107 42.1
MELO3C013232.2 Cucumis melo HOM05D002887 ORTHO05D003159 2.6e-10 69.3 91 44.0
CsaV3_7G021230 Cucumis sativus L. HOM05D002887 ORTHO05D003159 2.6e-10 69.3 91 45.1
ClCG09G021800 Citrullus lanatus HOM05D002887 ORTHO05D003159 4.4e-10 68.6 91 44.0
SGA_v2.0_scaffold49G18166 Striga asiatica HOM05D002887 ORTHO05D003159 5.7e-10 68.2 103 40.8
Ciclev10007786m.g Citrus clementina HOM05D002887 ORTHO05D003159 7.4e-10 67.8 107 38.3
FvH4_3g41370 Fragaria vesca HOM05D002887 ORTHO05D003159 7.4e-10 67.8 89 38.2
Eucgr.J00763 Eucalyptus grandis HOM05D002887 ORTHO05D003159 9.7e-10 67.4 113 36.3
DCAR_016809 Daucus carota HOM05D002887 ORTHO05D003159 1.3e-09 67.0 99 38.4
RcHm_v2.0_Chr5g0074291 Rosa chinensis HOM05D002887 ORTHO05D003159 1.3e-09 67.0 92 34.8
FAN21G1274 Fragaria x ananassa HOM05D002887 ORTHO05D003159 1.7e-09 66.6 89 38.2
Potri.011G169800 Populus trichocarpa HOM05D002887 ORTHO05D003159 1.7e-09 66.6 107 39.3
Sabra11G0137200 Salix brachista HOM05D002887 ORTHO05D003159 1.7e-09 66.6 107 38.3
FAN11G2314 Fragaria x ananassa HOM05D002887 ORTHO05D003159 2.2e-09 66.2 89 38.2
PGR119G2044 Punica granatum HOM05D002887 ORTHO05D003159 2.2e-09 66.2 91 42.9
THA.LOC104810311 Tarenaya hassleriana HOM05D002887 ORTHO05D003159 8.2e-09 64.3 94 39.4
Migut.H01703 Erythranthe guttata HOM05D002887 ORTHO05D003159 1.8e-08 63.2 85 42.4
FAN25G0222 Fragaria x ananassa HOM05D002887 ORTHO05D003159 1.8e-08 63.2 89 37.1
SEGI_07697 Sequoiadendron giganteum HOM05D002887 ORTHO05D003159 1.8e-08 63.2 88 42.0
HPP92_018919 Vanilla planifolia HOM05D002887 ORTHO05D003159 2.4e-08 62.8 91 39.6
Atru.chr2.3909 Acer truncatum HOM05D002887 ORTHO05D003159 4.1e-08 62.0 91 39.6
CAN.G623.100 Capsicum annuum HOM05D002887 ORTHO05D003159 7.7e-07 57.8 32 81.2
Sed0001540 Sechium edule HOM05D002887 ORTHO05D003159 2.9e-06 55.8 102 36.3
Sed0016468 Sechium edule HOM05D002887 ORTHO05D003159 2.9e-06 55.8 102 36.3


User provided reference genes

Program Settings