Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G203.14 Capsicum annuum HOM05D000397 ORTHO05D115640 7.6e-135 483.8 237 100.0
Nitab4.5_0003914g0110 Nicotiana tabacum HOM05D000397 ORTHO05D000492 1.1e-24 117.9 195 40.5
Peaxi162Scf00362g00057 Petunia axillaris HOM05D000397 ORTHO05D000492 1.9e-24 117.1 201 37.8
Nitab4.5_0000283g0470 Nicotiana tabacum HOM05D000397 ORTHO05D000492 1.2e-23 114.4 169 42.0
Cfa005259 Carpinus fangiana HOM05D000397 ORTHO05D000492 2.4e-19 100.1 136 39.0
Haze_02124 Corylus avellana HOM05D000397 ORTHO05D000492 2.4e-19 100.1 136 39.0
Lj5C178T2 Lonicera japonica HOM05D000397 ORTHO05D000492 3.1e-19 99.8 190 33.7
vmacro17315 Vaccinium macrocarpon HOM05D000397 ORTHO05D000492 1.7e-17 94.0 66 62.1
SGA_v2.0_scaffold80G25839 Striga asiatica HOM05D000397 ORTHO05D000492 1.1e-16 91.3 167 34.1
Lsat_1_v5_gn_5_39960 Lactuca sativa HOM05D000397 ORTHO05D000492 5.4e-16 89.0 181 32.6
SGA_v2.0_scaffold207G41933 Striga asiatica HOM05D000397 ORTHO05D000492 5.4e-16 89.0 62 59.7
DCAR_022945 Daucus carota HOM05D000397 ORTHO05D000492 7.1e-16 88.6 137 32.8
Aa31LG8G14110 Aethionema arabicum HOM05D000397 ORTHO05D002248 4.6e-15 85.9 189 30.2
MBI08_g05235_MAGBIO Magnolia biondii HOM05D000397 ORTHO05D000492 1.7e-14 84.0 61 57.4
DCAR_013012 Daucus carota HOM05D000397 ORTHO05D000492 3.6e-12 76.3 69 50.7
SalBow7G2399 Salvia bowleyana HOM05D000397 ORTHO05D000492 6.9e-11 72.0 59 54.2
CAN.G588.88 Capsicum annuum HOM05D000397 ORTHO05D000492 5.8e-10 68.9 285 24.9
ECA234G0990 Erigeron canadensis HOM05D000397 ORTHO05D000492 7.6e-10 68.6 57 52.6
vmacro09284 Vaccinium macrocarpon HOM05D000397 ORTHO05D000492 1.3e-09 67.8 57 54.4
vmacro15906 Vaccinium macrocarpon HOM05D000397 ORTHO05D000492 1.3e-09 67.8 160 30.0
DCAR_008041 Daucus carota HOM05D000397 ORTHO05D000492 1.7e-09 67.4 186 28.0
MBI07_g30173_MAGBIO Magnolia biondii HOM05D000397 ORTHO05D000492 3.8e-09 66.2 57 50.9
Cfa000460 Carpinus fangiana HOM05D000397 ORTHO05D000492 4.9e-09 65.9 55 50.9
Haze_06457 Corylus avellana HOM05D000397 ORTHO05D000492 4.9e-09 65.9 55 50.9
MBI06_g04177_MAGBIO Magnolia biondii HOM05D000397 ORTHO05D000492 1.1e-08 64.7 55 50.9
Nitab4.5_0003432g0090 Nicotiana tabacum HOM05D000397 ORTHO05D000492 1.4e-08 64.3 67 43.3
vmacro03869 Vaccinium macrocarpon HOM05D000397 ORTHO05D000492 1.4e-08 64.3 55 49.1
MBI06_g04178_MAGBIO Magnolia biondii HOM05D000397 ORTHO05D000492 1.9e-08 63.9 56 51.8
Haze_09424 Corylus avellana HOM05D000397 ORTHO05D000492 3.2e-08 63.2 58 50.0
Lj1C1205G5 Lonicera japonica HOM05D000397 ORTHO05D000492 3.2e-08 63.2 55 45.5
Sopen01g053720 Solanum pennellii HOM05D000397 ORTHO05D000492 3.2e-08 63.2 299 23.1
PGSC0003DMG400006168 Solanum tuberosum HOM05D000397 ORTHO05D000492 5.4e-08 62.4 299 23.1
Manes.16G027500 Manihot esculenta HOM05D000397 ORTHO05D000492 7.1e-08 62.0 48 54.2
Solyc01g111680.4 Solanum lycopersicum HOM05D000397 ORTHO05D000492 7.1e-08 62.0 156 30.1
ECA240G2492 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-07 61.2 61 45.9
SalBow7G3689 Salvia bowleyana HOM05D000397 ORTHO05D000492 1.6e-07 60.8 109 33.9
DCAR_020985 Daucus carota HOM05D000397 ORTHO05D000492 2.1e-07 60.5 58 48.3
Gohir.A04G131400 Gossypium hirsutum HOM05D000397 ORTHO05D000492 2.7e-07 60.1 301 22.3
Nitab4.5_0016829g0010 Nicotiana tabacum HOM05D000397 ORTHO05D000492 2.7e-07 60.1 57 47.4
Gohir.D04G167800 Gossypium hirsutum HOM05D000397 ORTHO05D000492 3.5e-07 59.7 301 22.3
Gorai.012G156100 Gossypium raimondii HOM05D000397 ORTHO05D000492 4.6e-07 59.3 301 21.9
CSS0022920 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D000492 1.0e-06 58.2 238 22.7
Dinv41929 Davidia involucrata HOM05D000397 ORTHO05D000492 1.3e-06 57.8 242 21.9
FvH4_2g15490 Fragaria vesca HOM05D000397 ORTHO05D000492 1.3e-06 57.8 238 22.3
FAN24G2245 Fragaria x ananassa HOM05D000397 ORTHO05D000492 1.3e-06 57.8 238 22.3
Nitab4.5_0000662g0190 Nicotiana tabacum HOM05D000397 ORTHO05D000492 1.3e-06 57.8 57 45.6
CARHR107210 Cardamine hirsuta HOM05D000397 ORTHO05D000492 1.7e-06 57.4 136 27.2
Lj5g0025383 Lotus japonicus HOM05D000397 ORTHO05D000492 1.7e-06 57.4 151 29.8
GSVIVG01024005001 Vitis vinifera HOM05D000397 ORTHO05D000492 1.7e-06 57.4 238 22.3
Rhsim05G0054000 Rhododendron simsii HOM05D000397 ORTHO05D000492 3.0e-06 56.6 294 22.1
FAN15G0320 Fragaria x ananassa HOM05D000397 ORTHO05D000492 3.9e-06 56.2 233 22.3
Glyma.20G107300 Glycine max HOM05D000397 ORTHO05D000492 3.9e-06 56.2 153 28.8
TAR625G1512 Trochodendron aralioides HOM05D000397 ORTHO05D000492 5.1e-06 55.8 238 22.3
FAN20G0070 Fragaria x ananassa HOM05D000397 ORTHO05D000492 8.7e-06 55.1 233 22.3


User provided reference genes

Program Settings