Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2003.1 Capsicum annuum HOM05D006126 ORTHO05D007792 2.1e-266 921.8 458 100.0
CAN.G920.2 Capsicum annuum HOM05D000241 ORTHO05D114941 1.4e-31 141.7 198 42.4
CAN.G308.9 Capsicum annuum HOM05D035136 ORTHO05D115190 1.1e-25 122.1 240 35.8
CAN.G674.36 Capsicum annuum HOM05D006126 ORTHO05D007792 3.0e-23 114.0 57 91.2
Nitab4.5_0000721g0080 Nicotiana tabacum HOM05D006126 ORTHO05D007792 2.0e-22 111.3 57 86.0
Nitab4.5_0004995g0010 Nicotiana tabacum HOM05D006126 ORTHO05D007792 2.0e-22 111.3 57 86.0
Solyc10g081650.2 Solanum lycopersicum HOM05D006126 ORTHO05D007792 1.7e-21 108.2 57 87.7
PGSC0003DMG400028224 Solanum tuberosum HOM05D006126 ORTHO05D007792 1.7e-21 108.2 57 87.7
THA.LOC104823508 Tarenaya hassleriana HOM05D006126 ORTHO05D007792 1.7e-21 108.2 57 82.5
Sopen10g032160 Solanum pennellii HOM05D006126 ORTHO05D007792 2.2e-21 107.8 57 86.0
MBI05_g40561_MAGBIO Magnolia biondii HOM05D006126 ORTHO05D007792 3.7e-21 107.1 62 80.6
Cpa.g.sc222.16 Carica papaya HOM05D006126 ORTHO05D007792 4.9e-21 106.7 57 82.5
Manes.08G037100 Manihot esculenta HOM05D006126 ORTHO05D007792 6.3e-21 106.3 57 80.7
vmacro07510 Vaccinium macrocarpon HOM05D006126 ORTHO05D007792 8.3e-21 105.9 61 75.4
HanXRQChr08g0230681 Helianthus annuus HOM05D006126 ORTHO05D007792 1.1e-20 105.5 57 80.7
Sed0001019 Sechium edule HOM05D006126 ORTHO05D007792 1.1e-20 105.5 57 80.7
Dinv11896 Davidia involucrata HOM05D006126 ORTHO05D007792 1.4e-20 105.1 57 80.7
ECA247G0804 Erigeron canadensis HOM05D006126 ORTHO05D007792 1.4e-20 105.1 57 78.9
TPR.G21232 Trifolium pratense HOM05D006126 ORTHO05D007792 1.4e-20 105.1 57 82.5
Ah.12g059600 Amaranthus hybridus HOM05D006126 ORTHO05D007792 1.8e-20 104.8 57 78.9
CARHR006510 Cardamine hirsuta HOM05D006126 ORTHO05D007792 1.8e-20 104.8 67 76.1
CsaV3_3G038300 Cucumis sativus L. HOM05D006126 ORTHO05D007792 1.8e-20 104.8 57 80.7
Eucgr.A02546 Eucalyptus grandis HOM05D006126 ORTHO05D007792 1.8e-20 104.8 57 77.2
AT1G06820 Arabidopsis thaliana HOM05D006126 ORTHO05D007792 2.4e-20 104.4 67 76.1
Glyma.02G188200 Glycine max HOM05D006126 ORTHO05D007792 2.4e-20 104.4 57 78.9
Actinidia37776 Actinidia chinensis HOM05D006126 ORTHO05D007792 3.1e-20 104.0 57 78.9
Aqoxy2G00644 Aquilegia oxysepala HOM05D006126 ORTHO05D007792 3.1e-20 104.0 57 82.5
arahy.Tifrunner.gnm1.ann1.1KUK4G Arachis hypogaea HOM05D006126 ORTHO05D007792 3.1e-20 104.0 124 46.0
Ciclev10011230m.g Citrus clementina HOM05D006126 ORTHO05D007792 3.1e-20 104.0 57 80.7
Medtr1g054965 Medicago truncatula HOM05D006126 ORTHO05D007792 3.1e-20 104.0 57 80.7
Oeu064515.1 Olea europaea HOM05D006126 ORTHO05D007792 3.1e-20 104.0 65 70.8
Lj1A1059G39 Lonicera japonica HOM05D006126 ORTHO05D007792 4.1e-20 103.6 57 78.9
Sabra16G0067300 Salix brachista HOM05D006126 ORTHO05D007792 4.1e-20 103.6 57 78.9
TWI53G0494 Tripterygium wilfordii HOM05D006126 ORTHO05D007792 4.1e-20 103.6 57 78.9
AUR62036324 Chenopodium quinoa HOM05D006126 ORTHO05D007792 5.4e-20 103.2 57 77.2
AUR62038430 Chenopodium quinoa HOM05D006126 ORTHO05D007792 5.4e-20 103.2 57 77.2
Thhalv10007141m.g Eutrema salsugineum HOM05D006126 ORTHO05D007792 7.0e-20 102.8 67 74.6
Psat6g087240 Pisum sativum HOM05D006126 ORTHO05D007792 7.0e-20 102.8 57 78.9
Potri.016G066000 Populus trichocarpa HOM05D006126 ORTHO05D007792 7.0e-20 102.8 57 78.9
Atru.chr8.1287 Acer truncatum HOM05D006126 ORTHO05D007792 9.2e-20 102.4 70 70.0
CSS0003927 Camellia sinensis var. sinensis HOM05D006126 ORTHO05D007792 9.2e-20 102.4 57 77.2
CSS0033902 Camellia sinensis var. sinensis HOM05D006126 ORTHO05D007792 9.2e-20 102.4 57 77.2
Duzib093G1994 Durio zibethinus HOM05D006126 ORTHO05D007792 9.2e-20 102.4 57 80.7
Lsat_1_v5_gn_9_13960 Lactuca sativa HOM05D006126 ORTHO05D007792 9.2e-20 102.4 57 78.9
Lj5g0022903 Lotus japonicus HOM05D006126 ORTHO05D007792 9.2e-20 102.4 57 77.2
PSO384G0472 Papaver somniferum HOM05D006126 ORTHO05D007792 9.2e-20 102.4 57 78.9
AL1G16820 Arabidopsis lyrata HOM05D006126 ORTHO05D007792 1.6e-19 101.7 70 70.0
Cc06_g06950 Coffea canephora HOM05D006126 ORTHO05D007792 1.6e-19 101.7 57 73.7
Phvul.007G265400 Phaseolus vulgaris HOM05D006126 ORTHO05D007792 1.6e-19 101.7 57 75.4
TAR633G2701 Trochodendron aralioides HOM05D006126 ORTHO05D007792 1.6e-19 101.7 57 78.9
VMungo0720G2782 Vigna mungo HOM05D006126 ORTHO05D007792 1.6e-19 101.7 57 75.4
Aa31LG1G7850 Aethionema arabicum HOM05D006126 ORTHO05D007792 2.0e-19 101.3 67 73.1
BcaC07g42047 Brassica carinata HOM05D006126 ORTHO05D007792 2.0e-19 101.3 65 70.8
C08p50990 Brassica napus HOM05D006126 ORTHO05D007792 2.0e-19 101.3 65 70.8
BolC8t52627H Brassica oleracea HOM05D006126 ORTHO05D007792 2.0e-19 101.3 65 70.8
Sp1g05550 Schrenkiella parvula HOM05D006126 ORTHO05D007792 2.0e-19 101.3 67 71.6
A09p66770 Brassica napus HOM05D006126 ORTHO05D007792 2.7e-19 100.9 64 71.9
BraA09t42015Z Brassica rapa HOM05D006126 ORTHO05D007792 2.7e-19 100.9 64 71.9
Cfa020070 Carpinus fangiana HOM05D006126 ORTHO05D007792 2.7e-19 100.9 57 77.2
Ca_11655_v3 Cicer arietinum L. HOM05D006126 ORTHO05D007792 2.7e-19 100.9 57 77.2
Gohir.D01G122900 Gossypium hirsutum HOM05D006126 ORTHO05D007792 2.7e-19 100.9 57 78.9
Gorai.002G153800 Gossypium raimondii HOM05D006126 ORTHO05D007792 2.7e-19 100.9 57 78.9
CDE06G1404 Ceratophyllum demersum HOM05D006126 ORTHO05D007792 3.5e-19 100.5 57 73.7
Haze_20125 Corylus avellana HOM05D006126 ORTHO05D007792 3.5e-19 100.5 57 77.2
Lalb_Chr02g0154231 Lupinus albus HOM05D006126 ORTHO05D007792 3.5e-19 100.5 57 75.4
QL07p026395 Quercus lobata HOM05D006126 ORTHO05D007792 3.5e-19 100.5 57 75.4
COL.COLO4_29497 Corchorus olitorius HOM05D006126 ORTHO05D007792 4.5e-19 100.1 57 77.2
Glyma.10G086700 Glycine max HOM05D006126 ORTHO05D007792 4.5e-19 100.1 57 75.4
arahy.Tifrunner.gnm1.ann1.Y9G5AQ Arachis hypogaea HOM05D006126 ORTHO05D007792 5.9e-19 99.8 57 75.4
ClCG10G017990 Citrullus lanatus HOM05D006126 ORTHO05D007792 5.9e-19 99.8 57 77.2
DCAR_013459 Daucus carota HOM05D006126 ORTHO05D007792 5.9e-19 99.8 57 75.4
Thecc.05G109900 Theobroma cacao HOM05D006126 ORTHO05D007792 5.9e-19 99.8 57 77.2
MELO3C009571.2 Cucumis melo HOM05D006126 ORTHO05D007792 7.8e-19 99.4 57 75.4
Gohir.A01G135800 Gossypium hirsutum HOM05D006126 ORTHO05D007792 7.8e-19 99.4 57 77.2
PSO339G3826 Papaver somniferum HOM05D006126 ORTHO05D007792 7.8e-19 99.4 57 75.4
GSVIVG01022527001 Vitis vinifera HOM05D006126 ORTHO05D007792 7.8e-19 99.4 57 73.7
Os11g0572700 Oryza sativa ssp. japonica HOM05D006126 ORTHO05D007792 1.0e-18 99.0 57 75.4
Peaxi162Scf00203g00033 Petunia axillaris HOM05D006126 ORTHO05D007792 1.0e-18 99.0 49 89.8
SGA_v2.0_scaffold184G40037 Striga asiatica HOM05D006126 ORTHO05D007792 1.0e-18 99.0 57 71.9
CiPaw.09G023900 Carya illinoinensis HOM05D006126 ORTHO05D007792 1.3e-18 98.6 57 73.7
RcHm_v2.0_Chr3g0477381 Rosa chinensis HOM05D006126 ORTHO05D007792 1.3e-18 98.6 97 50.5
CANSAT64G0080 Cannabis sativa HOM05D006126 ORTHO05D007792 1.7e-18 98.2 57 75.4
RcHm_v2.0_Chr7g0212011 Rosa chinensis HOM05D006126 ORTHO05D007792 1.7e-18 98.2 56 75.0
Hund10797 Selenicereus undatus HOM05D006126 ORTHO05D007792 1.7e-18 98.2 57 75.4
Migut.L01843 Erythranthe guttata HOM05D006126 ORTHO05D007792 2.3e-18 97.8 65 69.2
FvH4_6g21000 Fragaria vesca HOM05D006126 ORTHO05D007792 2.3e-18 97.8 57 71.9
FAN05G1377 Fragaria x ananassa HOM05D006126 ORTHO05D007792 2.3e-18 97.8 57 71.9
FAN05G2399 Fragaria x ananassa HOM05D006126 ORTHO05D007792 2.3e-18 97.8 57 71.9
FAN09G1524 Fragaria x ananassa HOM05D006126 ORTHO05D007792 2.3e-18 97.8 57 71.9
FAN14G0373 Fragaria x ananassa HOM05D006126 ORTHO05D007792 2.3e-18 97.8 57 71.9
Prupe.7G089400 Prunus persica HOM05D006126 ORTHO05D007792 2.3e-18 97.8 57 73.7
EL10Ac5g11809 Beta vulgaris HOM05D006126 ORTHO05D007792 3.8e-18 97.1 57 71.9
Rhsim03G0058700 Rhododendron simsii HOM05D006126 ORTHO05D007792 3.8e-18 97.1 61 68.9
Potri.006G199600 Populus trichocarpa HOM05D006126 ORTHO05D007792 5.0e-18 96.7 57 71.9
MD14G1044400 Malus domestica HOM05D006126 ORTHO05D007792 1.5e-17 95.1 70 62.9
HPP92_002245 Vanilla planifolia HOM05D006126 ORTHO05D007792 1.5e-17 95.1 57 70.2
MD12G1045600 Malus domestica HOM05D006126 ORTHO05D007792 2.5e-17 94.4 70 62.9
unitig_578.g16481 Utricularia gibba HOM05D006126 ORTHO05D007792 3.3e-17 94.0 57 68.4
Sc01g0005650 Simmondsia chinensis HOM05D006126 ORTHO05D007792 4.3e-17 93.6 57 68.4
ATR0697G097 Amborella trichopoda HOM05D006126 ORTHO05D007792 7.3e-17 92.8 57 71.9
TPR.G36242 Trifolium pratense HOM05D006126 ORTHO05D007792 7.3e-17 92.8 54 75.9
SMO141G0109 Selaginella moellendorffii HOM05D006126 ORTHO05D007792 6.1e-16 89.7 63 61.9
Carub.0001s0613 Capsella rubella HOM05D006126 ORTHO05D007792 3.4e-14 84.0 52 76.9
Mapoly0010s0015 Marchantia polymorpha HOM05D006126 ORTHO05D007792 4.4e-14 83.6 67 52.2
CAN.G339.26 Capsicum annuum HOM05D000108 ORTHO05D001724 2.9e-13 80.9 199 29.6
Oeu063079.1 Olea europaea HOM05D006126 ORTHO05D007792 3.7e-13 80.5 49 67.3
Pp3c23_1220 Physcomitrium patens HOM05D006126 ORTHO05D007792 1.4e-12 78.6 56 57.1
CSS0005287 Camellia sinensis var. sinensis HOM05D006126 ORTHO05D007792 1.3e-10 72.0 42 69.0
TPR.G36046 Trifolium pratense HOM05D006126 ORTHO05D007792 1.3e-10 72.0 42 71.4
Pp3c20_12140 Physcomitrium patens HOM05D006126 ORTHO05D007792 2.3e-10 71.2 60 50.0
CBR_g48125 Chara braunii HOM05D006126 ORTHO05D007792 5.0e-10 70.1 55 54.5
SEGI_16934 Sequoiadendron giganteum HOM05D006126 ORTHO05D007792 8.6e-10 69.3 42 66.7
Cre16.g651923 Chlamydomonas reinhardtii HOM05D006126 ORTHO05D007792 1.6e-08 65.1 61 47.5
CAN.G562.3 Capsicum annuum HOM05D035136 ORTHO05D114898 4.4e-06 57.0 46 50.0
CAN.G46.17 Capsicum annuum HOM05D009035 ORTHO05D011039 9.8e-06 55.8 119 31.1


User provided reference genes

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