Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1126.7 Capsicum annuum HOM05D002660 ORTHO05D011807 3.4e-74 281.6 143 100.0
CAN.G200.4 Capsicum annuum HOM05D002660 ORTHO05D011807 3.4e-74 281.6 143 100.0
CAN.G1159.14 Capsicum annuum HOM05D002660 ORTHO05D011807 1.3e-73 279.6 142 99.3
CAN.G134.22 Capsicum annuum HOM05D002660 ORTHO05D011807 5.5e-72 274.2 143 97.2
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 8.9e-30 134.0 82 81.7
Solyc00g142160.1 Solanum lycopersicum HOM05D002660 ORTHO05D011807 7.5e-29 131.0 82 81.7
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 2.2e-28 129.4 83 78.3
Solyc00g500104.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.7e-28 128.6 82 79.3
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.7e-28 128.6 82 79.3
PGSC0003DMG400023071 Solanum tuberosum HOM05D002660 ORTHO05D011807 7.0e-27 124.4 83 74.7
CAN.G841.4 Capsicum annuum HOM05D002660 ORTHO05D003902 2.3e-25 119.4 78 75.6
CAN.G1001.30 Capsicum annuum HOM05D002660 ORTHO05D003902 3.0e-25 119.0 82 73.2
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 5.6e-24 114.8 83 71.1
Nitab4.5_0001796g0150 Nicotiana tabacum HOM05D002660 ORTHO05D011807 2.1e-23 112.8 82 69.5
Nitab4.5_0027526g0010 Nicotiana tabacum HOM05D002660 ORTHO05D011807 4.0e-22 108.6 107 58.9
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 5.2e-22 108.2 84 64.3
Nitab4.5_0000172g1900 Nicotiana tabacum HOM05D002660 ORTHO05D011807 2.6e-21 105.9 82 65.9
Nitab4.5_0000592g0110 Nicotiana tabacum HOM05D002660 ORTHO05D011807 9.8e-21 104.0 82 65.9
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.7e-20 103.2 65 81.5
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.7e-20 103.2 65 81.5
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.7e-20 103.2 65 81.5
Solyc11g063540.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.7e-20 103.2 65 81.5
Solyc09g056110.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.1e-18 96.3 81 64.2
Solyc11g030850.1 Solanum lycopersicum HOM05D002660 ORTHO05D011807 2.7e-18 95.9 74 70.3
Nitab4.5_0001788g0190 Nicotiana tabacum HOM05D002660 ORTHO05D011807 4.3e-16 88.6 71 62.0
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 7.3e-16 87.8 82 61.0
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 3.1e-14 82.4 68 58.8
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 8.9e-14 80.9 82 56.1
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 1.5e-13 80.1 81 49.4
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 2.9e-12 75.9 51 74.5
Sopen05g012620 Solanum pennellii HOM05D002660 ORTHO05D003902 2.9e-12 75.9 51 74.5
Nitab4.5_0000172g0830 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.1e-11 73.9 103 48.5
CAN.G1167.16 Capsicum annuum HOM05D002660 ORTHO05D003902 1.9e-11 73.2 48 70.8
CAN.G1109.11 Capsicum annuum HOM05D002660 ORTHO05D003902 4.1e-11 72.0 48 70.8
CAN.G70.3 Capsicum annuum HOM05D002660 ORTHO05D003902 4.1e-11 72.0 55 67.3
Nitab4.5_0004300g0040 Nicotiana tabacum HOM05D002660 ORTHO05D011807 2.7e-10 69.3 95 47.4
Sed0020463 Sechium edule HOM05D002660 ORTHO05D003902 2.7e-10 69.3 68 58.8
PGSC0003DMG400006470 Solanum tuberosum HOM05D002660 ORTHO05D003902 1.0e-09 67.4 51 68.6
Nitab4.5_0009709g0040 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.5e-08 63.5 51 62.7


User provided reference genes

Program Settings