Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G20.4 Capsicum annuum HOM05D000541 ORTHO05D000482 3.6e-120 434.9 213 100.0
CAN.G1036.11 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-81 307.0 286 58.7
CAN.G476.3 Capsicum annuum HOM05D000541 ORTHO05D000137 6.7e-74 281.2 245 63.3
CAN.G1389.27 Capsicum annuum HOM05D000541 ORTHO05D000137 8.2e-72 274.2 165 82.4
CAN.G70.13 Capsicum annuum HOM05D000541 ORTHO05D000137 3.2e-60 235.7 156 77.6
CAN.G851.26 Capsicum annuum HOM05D000541 ORTHO05D000137 2.1e-59 233.0 209 61.7
CAN.G331.4 Capsicum annuum HOM05D000541 ORTHO05D000137 7.5e-49 198.0 212 54.7
CAN.G1166.30 Capsicum annuum HOM05D000541 ORTHO05D000137 2.4e-47 193.0 236 50.0
CAN.G635.27 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-46 190.7 212 52.8
CAN.G33.18 Capsicum annuum HOM05D000541 ORTHO05D000137 2.9e-45 186.0 116 80.2
CAN.G357.3 Capsicum annuum HOM05D000541 ORTHO05D000137 1.0e-34 151.0 166 53.0
CAN.G1392.3 Capsicum annuum HOM05D001503 ORTHO05D003820 4.4e-33 145.6 109 63.3
CAN.G415.3 Capsicum annuum HOM05D000541 ORTHO05D000137 9.2e-31 137.9 115 65.2
CAN.G659.21 Capsicum annuum HOM05D000541 ORTHO05D000137 3.7e-24 115.9 188 41.5
CAN.G884.15 Capsicum annuum HOM05D000541 ORTHO05D000137 7.0e-23 111.7 72 80.6
CAN.G607.14 Capsicum annuum HOM05D000541 ORTHO05D000137 2.1e-19 100.1 179 39.7
CAN.G546.61 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-19 99.8 176 33.5
CAN.G606.33 Capsicum annuum HOM05D000541 ORTHO05D000137 4.0e-18 95.9 130 47.7
CAN.G64.1 Capsicum annuum HOM05D000005 ORTHO05D000137 8.9e-18 94.7 159 34.6
CAN.G84.22 Capsicum annuum HOM05D000541 ORTHO05D000137 8.9e-18 94.7 189 32.3
PGSC0003DMG400027246 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.4e-17 92.8 161 33.5
Nitab4.5_0002151g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.8e-17 92.0 160 33.1
Nitab4.5_0005869g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 7.5e-17 91.7 160 31.9
Sopen11g029170 Solanum pennellii HOM05D000541 ORTHO05D000137 9.8e-17 91.3 159 32.7
Sopen02g006090 Solanum pennellii HOM05D000541 ORTHO05D000137 1.3e-16 90.9 161 32.3
Sopen07g023480 Solanum pennellii HOM05D000541 ORTHO05D000137 1.3e-16 90.9 159 32.7
Sopen01g037260 Solanum pennellii HOM05D000541 ORTHO05D000137 1.7e-16 90.5 159 32.7
Nitab4.5_0000983g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.9e-16 89.7 160 30.0
Nitab4.5_0006099g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.9e-16 89.7 171 32.2
Sopen08g017460 Solanum pennellii HOM05D000541 ORTHO05D000137 3.7e-16 89.4 156 32.7
Nitab4.5_0017301g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 8.3e-16 88.2 160 28.8
Sopen04g019360 Solanum pennellii HOM05D000004 ORTHO05D000002 8.3e-16 88.2 141 34.0
CAN.G726.5 Capsicum annuum HOM05D000541 ORTHO05D000137 3.2e-15 86.3 162 32.1
Nitab4.5_0008647g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.2e-15 86.3 160 29.4
Sopen04g016450 Solanum pennellii HOM05D000541 ORTHO05D000137 3.2e-15 86.3 161 30.4
Nitab4.5_0002353g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 7.0e-15 85.1 171 29.2
Sopen04g016430 Solanum pennellii HOM05D000541 ORTHO05D000137 7.0e-15 85.1 161 30.4
Sopen03g030640 Solanum pennellii HOM05D005797 ORTHO05D006479 9.2e-15 84.7 166 31.3
Nitab4.5_0007686g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.2e-14 84.3 176 29.0
Nitab4.5_0002059g0080 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.0e-14 83.6 172 29.1
Sopen06g004070 Solanum pennellii HOM05D000541 ORTHO05D000137 2.0e-14 83.6 142 32.4
CAN.G158.15 Capsicum annuum HOM05D000541 ORTHO05D000137 3.5e-14 82.8 133 35.3
Nitab4.5_0002750g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.0e-14 82.0 155 28.4
Nitab4.5_0008752g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.0e-14 82.0 160 28.8
PGSC0003DMG400004494 Solanum tuberosum HOM05D000541 ORTHO05D012255 6.0e-14 82.0 188 29.8
CAN.G1077.11 Capsicum annuum HOM05D000679 ORTHO05D000137 1.0e-13 81.3 93 38.7
CAN.G413.23 Capsicum annuum HOM05D000679 ORTHO05D000137 1.0e-13 81.3 163 28.8
Nitab4.5_0014318g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.0e-13 81.3 233 27.0
Nitab4.5_0008559g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.3e-13 80.9 156 28.8
CAN.G575.73 Capsicum annuum HOM05D000679 ORTHO05D000137 1.7e-13 80.5 159 30.2
Sopen01g032160 Solanum pennellii HOM05D000541 ORTHO05D012255 1.7e-13 80.5 141 32.6
CAN.G971.1 Capsicum annuum HOM05D000679 ORTHO05D000137 3.0e-13 79.7 97 33.0
Sopen03g020010 Solanum pennellii HOM05D000679 ORTHO05D000137 3.9e-13 79.3 150 30.7
PGSC0003DMG400007270 Solanum tuberosum HOM05D000679 ORTHO05D000482 3.9e-13 79.3 140 31.4
CAN.G572.59 Capsicum annuum HOM05D000541 ORTHO05D000137 6.6e-13 78.6 79 41.8
CAN.G637.41 Capsicum annuum HOM05D000679 ORTHO05D000137 6.6e-13 78.6 109 33.9
PGSC0003DMG400023258 Solanum tuberosum HOM05D000541 ORTHO05D000137 6.6e-13 78.6 158 29.7
PGSC0003DMG400037440 Solanum tuberosum HOM05D000541 ORTHO05D000137 6.6e-13 78.6 150 31.3
CAN.G861.21 Capsicum annuum HOM05D000541 ORTHO05D000137 8.6e-13 78.2 47 76.6
CAN.G874.17 Capsicum annuum HOM05D000541 ORTHO05D000137 8.6e-13 78.2 175 31.4
Sopen00g005350 Solanum pennellii HOM05D000541 ORTHO05D000137 1.1e-12 77.8 140 30.7
Sopen01g027580 Solanum pennellii HOM05D000006 ORTHO05D000001 1.1e-12 77.8 92 38.0
PGSC0003DMG400002966 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.1e-12 77.8 141 29.1
PGSC0003DMG400011887 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.5e-12 77.4 141 30.5
CAN.G1245.5 Capsicum annuum HOM05D000679 ORTHO05D000137 1.9e-12 77.0 92 33.7
CAN.G982.18 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-12 77.0 161 31.1
Nitab4.5_0014780g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.5e-12 76.6 154 28.6
Sopen08g011320 Solanum pennellii HOM05D000541 ORTHO05D000137 3.3e-12 76.3 140 30.0
Sopen02g001060 Solanum pennellii HOM05D000541 ORTHO05D000137 4.3e-12 75.9 140 29.3
Sopen02g032120 Solanum pennellii HOM05D000541 ORTHO05D000137 4.3e-12 75.9 140 29.3
Nitab4.5_0003533g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.6e-12 75.5 95 30.5
CAN.G258.7 Capsicum annuum HOM05D000541 ORTHO05D000137 7.3e-12 75.1 149 34.9
Sopen04g010090 Solanum pennellii HOM05D000679 ORTHO05D000137 9.5e-12 74.7 141 29.8
CAN.G362.44 Capsicum annuum HOM05D000679 ORTHO05D000137 1.2e-11 74.3 75 38.7
Nitab4.5_0010113g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.2e-11 74.3 161 28.0
PGSC0003DMG400034712 Solanum tuberosum HOM05D000679 ORTHO05D014686 1.2e-11 74.3 146 32.2
PGSC0003DMG400014993 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.6e-11 73.9 134 30.6
Nitab4.5_0000464g0070 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.1e-11 73.6 93 33.3
CAN.G1247.1 Capsicum annuum HOM05D000679 ORTHO05D000482 2.8e-11 73.2 83 37.3
CAN.G529.16 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-11 73.2 141 31.9
CAN.G905.30 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-11 73.2 190 30.0
CAN.G1659.8 Capsicum annuum HOM05D000679 ORTHO05D000137 3.6e-11 72.8 75 38.7
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 4.7e-11 72.4 160 26.9
Sopen10g010760 Solanum pennellii HOM05D000002 ORTHO05D000001 4.7e-11 72.4 93 34.4
Sopen11g024470 Solanum pennellii HOM05D000679 ORTHO05D000482 8.1e-11 71.6 160 26.9
PGSC0003DMG400047122 Solanum tuberosum HOM05D000541 ORTHO05D000137 8.1e-11 71.6 131 30.5
Sopen09g010700 Solanum pennellii HOM05D000541 ORTHO05D000137 1.1e-10 71.2 128 32.0
Sopen06g029680 Solanum pennellii HOM05D000679 ORTHO05D000137 1.4e-10 70.9 151 30.5
Nitab4.5_0008941g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.8e-10 70.5 69 40.6
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 1.8e-10 70.5 138 31.9
Solyc01g094420.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 2.3e-10 70.1 138 31.2
Sopen01g038220 Solanum pennellii HOM05D005063 ORTHO05D000482 2.3e-10 70.1 95 37.9
Sopen07g014970 Solanum pennellii HOM05D000679 ORTHO05D000482 2.3e-10 70.1 184 28.3
Sopen02g010860 Solanum pennellii HOM05D000541 ORTHO05D000137 4.0e-10 69.3 127 32.3
Nitab4.5_0001115g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.2e-10 68.9 68 36.8
Nitab4.5_0022521g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.2e-10 68.9 97 28.9
CAN.G141.13 Capsicum annuum HOM05D000541 ORTHO05D000137 6.8e-10 68.6 80 53.8
Solyc10g050777.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 6.8e-10 68.6 91 35.2
Nitab4.5_0014452g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.2e-09 67.8 85 31.8
Sopen08g027430 Solanum pennellii HOM05D000679 ORTHO05D030640 1.2e-09 67.8 163 28.8
Solyc06g050740.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 1.5e-09 67.4 129 25.6
CAN.G708.6 Capsicum annuum HOM05D000886 ORTHO05D000525 2.0e-09 67.0 133 31.6
Nitab4.5_0001018g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.0e-09 67.0 133 31.6
Nitab4.5_0001425g0150 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.0e-09 67.0 71 39.4
Nitab4.5_0006644g0120 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.0e-09 67.0 70 40.0
Sopen05g009150 Solanum pennellii HOM05D009268 ORTHO05D011733 2.0e-09 67.0 91 34.1
Nitab4.5_0013794g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.4e-09 66.2 93 29.0
Solyc03g034207.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 3.4e-09 66.2 93 29.0
Solyc11g061985.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 3.4e-09 66.2 89 32.6
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 4.4e-09 65.9 94 35.1
CAN.G339.36 Capsicum annuum HOM05D000541 ORTHO05D000137 4.4e-09 65.9 123 31.7
Solyc08g014616.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 4.4e-09 65.9 160 25.6
Sopen05g009010 Solanum pennellii HOM05D000541 ORTHO05D000137 4.4e-09 65.9 79 35.4
CAN.G1458.4 Capsicum annuum HOM05D000541 ORTHO05D000137 5.8e-09 65.5 148 29.7
CAN.G182.15 Capsicum annuum HOM05D003397 ORTHO05D000137 5.8e-09 65.5 156 32.7
Nitab4.5_0000335g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.8e-09 65.5 139 29.5
Sopen01g022800 Solanum pennellii HOM05D000679 ORTHO05D000482 5.8e-09 65.5 160 25.0
PGSC0003DMG400005561 Solanum tuberosum HOM05D000541 ORTHO05D023154 5.8e-09 65.5 153 28.1
CAN.G226.24 Capsicum annuum HOM05D000679 ORTHO05D000137 7.5e-09 65.1 91 27.5
CAN.G990.2 Capsicum annuum HOM05D000541 ORTHO05D000137 2.2e-08 63.5 100 41.0
Solyc01g150118.1 Solanum lycopersicum HOM05D009268 ORTHO05D000482 2.2e-08 63.5 91 31.9
Sopen03g025990 Solanum pennellii HOM05D000679 ORTHO05D030640 3.7e-08 62.8 127 29.9
CAN.G702.38 Capsicum annuum HOM05D000541 ORTHO05D000137 8.3e-08 61.6 73 35.6
Nitab4.5_0009150g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 8.3e-08 61.6 181 26.5
PGSC0003DMG400014694 Solanum tuberosum HOM05D005063 ORTHO05D000482 1.1e-07 61.2 142 28.2
Nitab4.5_0007978g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.4e-07 60.8 59 39.0
Solyc10g150130.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 1.4e-07 60.8 58 39.7
Sopen06g002980 Solanum pennellii HOM05D005063 ORTHO05D000482 1.4e-07 60.8 213 25.8
CAN.G568.8 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-07 60.5 62 40.3
Sopen01g006060 Solanum pennellii HOM05D003373 ORTHO05D004419 1.9e-07 60.5 116 32.8
CAN.G745.11 Capsicum annuum HOM05D000541 ORTHO05D000137 2.4e-07 60.1 55 45.5
Nitab4.5_0001230g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.4e-07 60.1 168 23.2
Sopen12g015350 Solanum pennellii HOM05D000541 ORTHO05D000137 2.4e-07 60.1 118 33.9
Nitab4.5_0019527g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.2e-07 59.7 94 31.9
Solyc06g008150.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 4.1e-07 59.3 194 25.3
CAN.G532.22 Capsicum annuum HOM05D000541 ORTHO05D000137 5.4e-07 58.9 108 27.8
Nitab4.5_0000252g0250 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.4e-07 58.9 87 29.9
Sopen06g005890 Solanum pennellii HOM05D010988 ORTHO05D000137 5.4e-07 58.9 89 32.6
Solyc08g065193.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 7.1e-07 58.5 58 37.9
Sopen12g022010 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-07 58.5 113 25.7
PGSC0003DMG400030095 Solanum tuberosum HOM05D000541 ORTHO05D012255 7.1e-07 58.5 139 30.9
Nitab4.5_0005005g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.1e-06 57.0 156 25.0
Nitab4.5_0000306g0070 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.7e-06 56.6 50 42.0
Sopen04g013050 Solanum pennellii HOM05D000541 ORTHO05D000137 2.7e-06 56.6 79 35.4
Sopen10g007210 Solanum pennellii HOM05D000679 ORTHO05D000137 2.7e-06 56.6 69 30.4
CAN.G1415.4 Capsicum annuum HOM05D000679 ORTHO05D000137 3.5e-06 56.2 52 38.5
CAN.G449.58 Capsicum annuum HOM05D000679 ORTHO05D000482 3.5e-06 56.2 62 35.5
Sopen01g053420 Solanum pennellii HOM05D000679 ORTHO05D014266 3.5e-06 56.2 167 24.6
Sopen10g022900 Solanum pennellii HOM05D000011 ORTHO05D000137 3.5e-06 56.2 104 34.6
CAN.G105.2 Capsicum annuum HOM05D000679 ORTHO05D000137 4.6e-06 55.8 48 43.8
Nitab4.5_0004192g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.6e-06 55.8 80 31.2
Sopen09g012330 Solanum pennellii HOM05D000541 ORTHO05D000137 4.6e-06 55.8 102 33.3
Nitab4.5_0001472g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.0e-06 55.5 128 25.0
Nitab4.5_0005263g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 6.0e-06 55.5 80 36.2
Nitab4.5_0006628g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.0e-06 55.5 156 24.4


User provided reference genes

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