Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G20.29 Capsicum annuum HOM05D000054 ORTHO05D024789 2.1e-55 218.8 108 100.0
CAN.G1172.5 Capsicum annuum HOM05D000054 ORTHO05D003784 1.7e-28 129.4 87 77.0
Peaxi162Scf00006g00402 Petunia axillaris HOM05D000054 ORTHO05D003784 6.9e-27 124.0 85 74.1
Solyc09g074240.1 Solanum lycopersicum HOM05D000054 ORTHO05D003784 9.1e-27 123.6 88 71.6
Sopen09g029060 Solanum pennellii HOM05D000054 ORTHO05D003784 9.1e-27 123.6 88 71.6
PGSC0003DMG400044745 Solanum tuberosum HOM05D000054 ORTHO05D003784 2.6e-26 122.1 87 72.4
Nitab4.5_0001323g0160 Nicotiana tabacum HOM05D000054 ORTHO05D003784 1.0e-25 120.2 90 70.0
Oeu011184.1 Olea europaea HOM05D000054 ORTHO05D003784 4.2e-16 88.2 74 58.1
Rhsim01G0278100 Rhododendron simsii HOM05D000054 ORTHO05D003784 2.1e-15 85.9 67 64.2
Cfa006070 Carpinus fangiana HOM05D000054 ORTHO05D003784 3.6e-15 85.1 74 58.1
Actinidia21086 Actinidia chinensis HOM05D000054 ORTHO05D003784 4.7e-15 84.7 67 64.2
CAN.G1682.8 Capsicum annuum HOM05D000054 ORTHO05D003784 6.1e-15 84.3 67 64.2
Migut.D01001 Erythranthe guttata HOM05D000054 ORTHO05D003784 6.1e-15 84.3 67 62.7
Hma1.2p1_0257F.1_g103980 Hydrangea macrophylla HOM05D000054 ORTHO05D003784 6.1e-15 84.3 67 65.7
SalBow3G4619 Salvia bowleyana HOM05D000054 ORTHO05D003784 6.1e-15 84.3 67 64.2
MSTRG.18206 Avicennia marina HOM05D000054 ORTHO05D003784 1.0e-14 83.6 72 56.9
HanXRQChr15g0466541 Helianthus annuus HOM05D000054 ORTHO05D003784 1.4e-14 83.2 82 51.2
TWI14G1430 Tripterygium wilfordii HOM05D000054 ORTHO05D003784 1.4e-14 83.2 79 50.6
Dinv11272 Davidia involucrata HOM05D000054 ORTHO05D003784 2.3e-14 82.4 74 55.4
Atru.chr5.1320 Acer truncatum HOM05D000054 ORTHO05D003784 3.9e-14 81.6 67 58.2
Eucgr.H01603 Eucalyptus grandis HOM05D000054 ORTHO05D003784 5.2e-14 81.3 77 54.5
Oeu001448.1 Olea europaea HOM05D000054 ORTHO05D003784 8.8e-14 80.5 74 54.1
MBI19_g27935_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D003784 1.1e-13 80.1 74 52.7
CiPaw.07G096800 Carya illinoinensis HOM05D000054 ORTHO05D003784 1.5e-13 79.7 74 52.7
PGR119G0564 Punica granatum HOM05D000054 ORTHO05D003784 1.5e-13 79.7 88 47.7
DCAR_002767 Daucus carota HOM05D000054 ORTHO05D003784 2.0e-13 79.3 68 58.8
QL12p023087 Quercus lobata HOM05D000054 ORTHO05D003784 2.0e-13 79.3 67 58.2
Aqoxy5G00577 Aquilegia oxysepala HOM05D000054 ORTHO05D003784 3.3e-13 78.6 74 51.4
Cc01_g19920 Coffea canephora HOM05D000054 ORTHO05D003784 3.3e-13 78.6 83 51.8
ECA247G2999 Erigeron canadensis HOM05D000054 ORTHO05D003784 3.3e-13 78.6 86 53.5
CiPaw.07G096900 Carya illinoinensis HOM05D000054 ORTHO05D003784 5.7e-13 77.8 74 51.4
HanXRQChr10g0283001 Helianthus annuus HOM05D000054 ORTHO05D003784 5.7e-13 77.8 79 51.9
TWI59G0058 Tripterygium wilfordii HOM05D000054 ORTHO05D003784 9.7e-13 77.0 79 45.6
DCAR_005827 Daucus carota HOM05D000054 ORTHO05D003784 1.3e-12 76.6 68 57.4
CSS0028404 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D003784 1.7e-12 76.3 69 59.4
Haze_04780 Corylus avellana HOM05D000054 ORTHO05D003784 1.7e-12 76.3 70 58.6
Manes.05G071200 Manihot esculenta HOM05D000054 ORTHO05D003784 1.7e-12 76.3 74 54.1
TAR633G1170 Trochodendron aralioides HOM05D000054 ORTHO05D003784 1.7e-12 76.3 67 58.2
TAR362G1332 Trochodendron aralioides HOM05D000054 ORTHO05D003784 2.2e-12 75.9 88 40.9
TAR633G2737 Trochodendron aralioides HOM05D000054 ORTHO05D003784 2.2e-12 75.9 67 56.7
EL10Ac4g10092 Beta vulgaris HOM05D000054 ORTHO05D003784 2.8e-12 75.5 70 57.1
CANSAT25G0670 Cannabis sativa HOM05D000054 ORTHO05D003784 2.8e-12 75.5 67 59.7
TPR.G16926 Trifolium pratense HOM05D000054 ORTHO05D003784 2.8e-12 75.5 67 58.2
Actinidia24865 Actinidia chinensis HOM05D000054 ORTHO05D003784 4.8e-12 74.7 66 60.6
Potri.014G136466 Populus trichocarpa HOM05D000054 ORTHO05D003784 4.8e-12 74.7 74 48.6
Glyma.02G150600 Glycine max HOM05D000054 ORTHO05D003784 6.3e-12 74.3 91 46.2
CAN.G3.36 Capsicum annuum HOM05D000054 ORTHO05D024789 8.2e-12 73.9 54 70.4
DCAR_002768 Daucus carota HOM05D000054 ORTHO05D003784 8.2e-12 73.9 67 56.7
FvH4_2g24291 Fragaria vesca HOM05D000054 ORTHO05D003784 8.2e-12 73.9 74 51.4
AUR62006561 Chenopodium quinoa HOM05D000054 ORTHO05D003784 1.1e-11 73.6 70 55.7
Lj1C42T5 Lonicera japonica HOM05D000054 ORTHO05D003784 1.1e-11 73.6 67 58.2
Potri.014G136400 Populus trichocarpa HOM05D000054 ORTHO05D003784 1.1e-11 73.6 74 48.6
Sabra14G0102900 Salix brachista HOM05D000054 ORTHO05D003784 1.1e-11 73.6 68 52.9
HPP92_016924 Vanilla planifolia HOM05D000054 ORTHO05D003784 1.1e-11 73.6 78 48.7
Ca_10391_v3 Cicer arietinum L. HOM05D000054 ORTHO05D003784 1.4e-11 73.2 94 47.9
ClCG09G006710 Citrullus lanatus HOM05D000054 ORTHO05D003784 1.4e-11 73.2 67 55.2
FAN15G2702 Fragaria x ananassa HOM05D000054 ORTHO05D003784 1.4e-11 73.2 67 55.2
FAN20G3019 Fragaria x ananassa HOM05D000054 ORTHO05D003784 1.4e-11 73.2 67 55.2
VMungo0720G2241 Vigna mungo HOM05D000054 ORTHO05D003784 1.4e-11 73.2 78 48.7
Phvul.007G168100 Phaseolus vulgaris HOM05D000054 ORTHO05D003784 1.8e-11 72.8 78 48.7
Prupe.8G248800 Prunus persica HOM05D000054 ORTHO05D003784 1.8e-11 72.8 74 48.6
RcHm_v2.0_Chr6g0292151 Rosa chinensis HOM05D000054 ORTHO05D003784 1.8e-11 72.8 74 51.4
THA.LOC104807107 Tarenaya hassleriana HOM05D000054 ORTHO05D003784 1.8e-11 72.8 78 48.7
Psat6g169680 Pisum sativum HOM05D000054 ORTHO05D003784 2.4e-11 72.4 95 47.4
AUR62000216 Chenopodium quinoa HOM05D000054 ORTHO05D003784 4.1e-11 71.6 67 56.7
Lj5g0019972 Lotus japonicus HOM05D000054 ORTHO05D003784 4.1e-11 71.6 90 45.6
CSS0008061 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D003784 5.3e-11 71.2 77 49.4
COL.COLO4_09153 Corchorus olitorius HOM05D000054 ORTHO05D003784 5.3e-11 71.2 68 52.9
MD11G1293500 Malus domestica HOM05D000054 ORTHO05D003784 7.0e-11 70.9 67 55.2
CsaV3_1G012960 Cucumis sativus L. HOM05D000054 ORTHO05D003784 9.1e-11 70.5 67 52.2
Glyma.10G023400 Glycine max HOM05D000054 ORTHO05D003784 9.1e-11 70.5 78 47.4
MD03G1272600 Malus domestica HOM05D000054 ORTHO05D003784 1.2e-10 70.1 78 47.4
Carub.0004s3073 Capsella rubella HOM05D000054 ORTHO05D003784 1.6e-10 69.7 81 45.7
Ciclev10023732m.g Citrus clementina HOM05D000054 ORTHO05D003784 1.6e-10 69.7 55 61.8
Peaxi162Scf01039g00236 Petunia axillaris HOM05D000054 ORTHO05D003784 2.0e-10 69.3 59 61.0
Gohir.D12G006400 Gossypium hirsutum HOM05D000054 ORTHO05D003784 2.6e-10 68.9 65 55.4
Gorai.008G006500 Gossypium raimondii HOM05D000054 ORTHO05D003784 2.6e-10 68.9 65 55.4
PSO210G7090 Papaver somniferum HOM05D000054 ORTHO05D003784 2.6e-10 68.9 85 43.5
Thecc.01G286700 Theobroma cacao HOM05D000054 ORTHO05D003784 2.6e-10 68.9 67 53.7
AL4G47610 Arabidopsis lyrata HOM05D000054 ORTHO05D003784 4.5e-10 68.2 81 44.4
DCAR_018380 Daucus carota HOM05D000054 ORTHO05D003784 4.5e-10 68.2 60 56.7
Duzib138G0059 Durio zibethinus HOM05D000054 ORTHO05D003784 4.5e-10 68.2 67 53.7
Lalb_Chr01g0020271 Lupinus albus HOM05D000054 ORTHO05D003784 4.5e-10 68.2 67 55.2
Sc17g0003890 Simmondsia chinensis HOM05D000054 ORTHO05D003784 4.5e-10 68.2 67 50.7
AT2G48010 Arabidopsis thaliana HOM05D000054 ORTHO05D003784 5.9e-10 67.8 81 44.4
BcaC01g05663 Brassica carinata HOM05D000054 ORTHO05D003784 5.9e-10 67.8 75 48.0
BolC3t14748H Brassica oleracea HOM05D000054 ORTHO05D003784 5.9e-10 67.8 75 48.0
Ciclev10024255m.g Citrus clementina HOM05D000054 ORTHO05D003784 5.9e-10 67.8 55 58.2
Sed0015258 Sechium edule HOM05D000054 ORTHO05D003784 5.9e-10 67.8 73 43.8
CARHR143400 Cardamine hirsuta HOM05D000054 ORTHO05D003784 7.7e-10 67.4 81 45.7
Gohir.A12G007000 Gossypium hirsutum HOM05D000054 ORTHO05D003784 7.7e-10 67.4 65 53.8
MELO3C005042.2 Cucumis melo HOM05D000054 ORTHO05D003784 1.0e-09 67.0 51 60.8
Lalb_Chr06g0163221 Lupinus albus HOM05D000054 ORTHO05D003784 1.3e-09 66.6 81 45.7
BcaB01g03845 Brassica carinata HOM05D000054 ORTHO05D003784 2.2e-09 65.9 75 46.7
C03p23520 Brassica napus HOM05D000054 ORTHO05D003784 2.2e-09 65.9 75 46.7
Lsat_1_v5_gn_9_1760 Lactuca sativa HOM05D000205 ORTHO05D003784 2.2e-09 65.9 64 54.7
SGA_v2.0_scaffold11G05782 Striga asiatica HOM05D000054 ORTHO05D003784 2.2e-09 65.9 67 53.7
GSVIVG01011046001 Vitis vinifera HOM05D000054 ORTHO05D003784 2.2e-09 65.9 70 48.6
Ca_08552_v3 Cicer arietinum L. HOM05D000054 ORTHO05D003784 2.9e-09 65.5 89 42.7
Ca_08586_v3 Cicer arietinum L. HOM05D000054 ORTHO05D003784 2.9e-09 65.5 89 42.7
Cpa.g.sc9.138 Carica papaya HOM05D000054 ORTHO05D003784 5.0e-09 64.7 67 47.8
CiPaw.07G097100 Carya illinoinensis HOM05D000054 ORTHO05D003784 5.0e-09 64.7 51 60.8
Medtr1g089600 Medicago truncatula HOM05D000054 ORTHO05D003784 6.5e-09 64.3 68 52.9
RcHm_v2.0_Chr6g0292131 Rosa chinensis HOM05D000054 ORTHO05D024789 6.5e-09 64.3 59 55.9
Sed0017761 Sechium edule HOM05D000054 ORTHO05D003784 6.5e-09 64.3 66 47.0
Sp4g18630 Schrenkiella parvula HOM05D000054 ORTHO05D003784 8.5e-09 63.9 75 46.7
ATR0580G022 Amborella trichopoda HOM05D000054 ORTHO05D003784 1.5e-08 63.2 67 46.3
A03p20080 Brassica napus HOM05D000054 ORTHO05D003784 1.5e-08 63.2 73 46.6
BraA03t11258Z Brassica rapa HOM05D000054 ORTHO05D003784 1.5e-08 63.2 73 46.6
CSS0024403 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D003784 1.5e-08 63.2 48 60.4
Thhalv10016382m.g Eutrema salsugineum HOM05D000054 ORTHO05D003784 1.5e-08 63.2 81 43.2
Phvul.001G146900 Phaseolus vulgaris HOM05D000054 ORTHO05D003784 1.5e-08 63.2 80 42.5
arahy.Tifrunner.gnm1.ann1.LDUN37 Arachis hypogaea HOM05D000054 ORTHO05D003784 1.9e-08 62.8 102 39.2
Gohir.A11G119401 Gossypium hirsutum HOM05D000054 ORTHO05D003784 2.5e-08 62.4 67 47.8
VMungo1383G1639 Vigna mungo HOM05D000054 ORTHO05D003784 2.5e-08 62.4 67 47.8
arahy.Tifrunner.gnm1.ann1.L5HKCU Arachis hypogaea HOM05D000054 ORTHO05D003784 3.2e-08 62.0 100 39.0
CDE02G4796 Ceratophyllum demersum HOM05D000054 ORTHO05D003784 3.2e-08 62.0 66 42.4
Glyma.19G152200 Glycine max HOM05D000054 ORTHO05D003784 3.2e-08 62.0 67 47.8
Gorai.007G133100 Gossypium raimondii HOM05D000054 ORTHO05D003784 3.2e-08 62.0 67 47.8
Lj1g0027768 Lotus japonicus HOM05D000054 ORTHO05D003784 3.2e-08 62.0 69 52.2
CDE09G0371 Ceratophyllum demersum HOM05D000054 ORTHO05D003784 4.2e-08 61.6 66 42.4
Glyma.03G149000 Glycine max HOM05D000054 ORTHO05D003784 4.2e-08 61.6 67 47.8
Sc17g0003870 Simmondsia chinensis HOM05D000054 ORTHO05D024789 4.2e-08 61.6 66 50.0
Ah.06g194760 Amaranthus hybridus HOM05D000054 ORTHO05D003784 5.5e-08 61.2 51 54.9
Gohir.A08G184600 Gossypium hirsutum HOM05D000054 ORTHO05D003784 7.2e-08 60.8 67 44.8
Aa31LG1G29430 Aethionema arabicum HOM05D000054 ORTHO05D003784 9.4e-08 60.5 71 45.1
Lalb_Chr21g0306641 Lupinus albus HOM05D000054 ORTHO05D003784 9.4e-08 60.5 68 50.0
SEGI_12482 Sequoiadendron giganteum HOM05D000054 ORTHO05D003784 9.4e-08 60.5 67 43.3
Medtr7g094100 Medicago truncatula HOM05D000054 ORTHO05D003784 1.2e-07 60.1 68 51.5
arahy.Tifrunner.gnm1.ann1.5QD0EV Arachis hypogaea HOM05D000054 ORTHO05D003784 2.7e-07 58.9 67 44.8
Gohir.D08G202956 Gossypium hirsutum HOM05D000054 ORTHO05D003784 3.6e-07 58.5 67 44.8
Gorai.004G214700 Gossypium raimondii HOM05D000054 ORTHO05D003784 3.6e-07 58.5 67 44.8
TPR.G39952 Trifolium pratense HOM05D000054 ORTHO05D003784 6.1e-07 57.8 82 42.7
Cfa006527 Carpinus fangiana HOM05D000054 ORTHO05D003784 1.0e-06 57.0 78 38.5
ECA247G2237 Erigeron canadensis HOM05D000054 ORTHO05D003784 1.0e-06 57.0 51 54.9
Eucgr.H04437 Eucalyptus grandis HOM05D000054 ORTHO05D003784 1.4e-06 56.6 69 42.0
Psat3g066760 Pisum sativum HOM05D000054 ORTHO05D003784 1.4e-06 56.6 83 42.2
FAN02G1461 Fragaria x ananassa HOM05D000054 ORTHO05D003784 4.0e-06 55.1 50 54.0
FvH4_6g05020 Fragaria vesca HOM05D000054 ORTHO05D003784 8.8e-06 53.9 52 53.8
FAN14G4207 Fragaria x ananassa HOM05D000054 ORTHO05D003784 8.8e-06 53.9 52 53.8
FAN14G5301 Fragaria x ananassa HOM05D000054 ORTHO05D003784 8.8e-06 53.9 52 53.8


User provided reference genes

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