Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2.1 Capsicum annuum HOM05D006499 ORTHO05D007874 1.2e-55 219.5 109 100.0
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 1.0e-38 163.3 82 98.8
Peaxi162Scf00021g01915 Petunia axillaris HOM05D006499 ORTHO05D007874 8.8e-38 160.2 84 95.2
Sopen01g003460 Solanum pennellii HOM05D006499 ORTHO05D007874 1.5e-37 159.5 80 97.5
Nitab4.5_0000069g0350 Nicotiana tabacum HOM05D006499 ORTHO05D007874 3.3e-37 158.3 85 92.9
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 3.3e-37 158.3 80 96.2
Nitab4.5_0004301g0030 Nicotiana tabacum HOM05D006499 ORTHO05D007874 4.8e-36 154.5 84 92.9
MSTRG.12232 Avicennia marina HOM05D006499 ORTHO05D007874 1.0e-33 146.7 80 90.0
Cc02_g20760 Coffea canephora HOM05D006499 ORTHO05D007874 2.5e-32 142.1 83 84.3
Lj6P712T24 Lonicera japonica HOM05D006499 ORTHO05D007874 3.2e-32 141.7 81 82.7
vmacro04318 Vaccinium macrocarpon HOM05D006499 ORTHO05D007874 3.2e-32 141.7 81 84.0
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 9.4e-32 140.2 79 84.8
Lj6P717T75 Lonicera japonica HOM05D006499 ORTHO05D007874 1.2e-31 139.8 79 83.5
CSS0024171 Camellia sinensis var. sinensis HOM05D006499 ORTHO05D007874 1.6e-31 139.4 81 81.5
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 2.1e-31 139.0 81 81.5
SGA_v2.0_scaffold49G18416 Striga asiatica HOM05D006499 ORTHO05D007874 2.7e-31 138.7 109 68.8
Glyma.09G283200 Glycine max HOM05D006499 ORTHO05D007874 3.6e-31 138.3 80 83.8
Oeu012342.1 Olea europaea HOM05D006499 ORTHO05D007874 4.7e-31 137.9 79 84.8
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 4.7e-31 137.9 80 83.8
Potri.003G003300 Populus trichocarpa HOM05D006499 ORTHO05D007874 8.0e-31 137.1 77 84.4
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 8.0e-31 137.1 77 85.7
Nn4g24968 Nelumbo nucifera HOM05D006499 ORTHO05D007874 1.0e-30 136.7 81 80.2
Actinidia13714 Actinidia chinensis HOM05D006499 ORTHO05D007874 1.4e-30 136.3 81 80.2
Migut.H01291 Erythranthe guttata HOM05D006499 ORTHO05D007874 1.4e-30 136.3 83 78.3
Lsat_1_v5_gn_8_80081 Lactuca sativa HOM05D006499 ORTHO05D007874 1.4e-30 136.3 79 83.5
Rhsim05G0006600 Rhododendron simsii HOM05D006499 ORTHO05D007874 1.4e-30 136.3 81 80.2
AUR62017708 Chenopodium quinoa HOM05D006499 ORTHO05D007874 1.8e-30 136.0 81 79.0
Phvul.003G004400 Phaseolus vulgaris HOM05D006499 ORTHO05D007874 1.8e-30 136.0 83 78.3
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 2.3e-30 135.6 77 84.4
EL10Ac9g22960 Beta vulgaris HOM05D006499 ORTHO05D007874 3.0e-30 135.2 99 72.7
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 4.0e-30 134.8 84 75.0
Manes.15G079500 Manihot esculenta HOM05D006499 ORTHO05D007874 5.2e-30 134.4 78 80.8
TPR.G29797 Trifolium pratense HOM05D006499 ORTHO05D007874 6.8e-30 134.0 81 76.5
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 1.5e-29 132.9 87 75.9
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 1.5e-29 132.9 83 79.5
AUR62032973 Chenopodium quinoa HOM05D006499 ORTHO05D007874 2.6e-29 132.1 80 78.8
MD16G1003500 Malus domestica HOM05D006499 ORTHO05D007874 3.4e-29 131.7 77 80.5
Medtr1g037830 Medicago truncatula HOM05D006499 ORTHO05D007874 3.4e-29 131.7 81 76.5
Medtr1g038530 Medicago truncatula HOM05D006499 ORTHO05D007874 3.4e-29 131.7 81 76.5
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 4.4e-29 131.3 80 78.8
BcaB07g29862 Brassica carinata HOM05D006499 ORTHO05D007874 4.4e-29 131.3 84 76.2
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 4.4e-29 131.3 87 74.7
Ca_05122_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 5.7e-29 131.0 78 78.2
Thecc.02G158700 Theobroma cacao HOM05D006499 ORTHO05D007874 5.7e-29 131.0 77 80.5
Aa31LG11G2680 Aethionema arabicum HOM05D006499 ORTHO05D007874 7.5e-29 130.6 77 80.5
arahy.Tifrunner.gnm1.ann1.U0P7JC Arachis hypogaea HOM05D000717 ORTHO05D000555 9.8e-29 130.2 80 80.0
QL04p029592 Quercus lobata HOM05D006499 ORTHO05D007874 1.3e-28 129.8 77 80.5
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 1.3e-28 129.8 77 80.5
RcHm_v2.0_Chr4g0446811 Rosa chinensis HOM05D006499 ORTHO05D007874 1.3e-28 129.8 78 80.8
Thhalv10005281m.g Eutrema salsugineum HOM05D006499 ORTHO05D007874 1.7e-28 129.4 77 79.2
FAN07G1092 Fragaria x ananassa HOM05D006499 ORTHO05D007874 2.2e-28 129.0 72 88.9
CARHR190310 Cardamine hirsuta HOM05D006499 ORTHO05D007874 2.8e-28 128.6 77 79.2
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 2.8e-28 128.6 80 77.5
Ciclev10032745m.g Citrus clementina HOM05D006499 ORTHO05D007874 2.8e-28 128.6 78 76.9
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 3.7e-28 128.3 90 70.0
BcaC03g18032 Brassica carinata HOM05D006499 ORTHO05D007874 4.8e-28 127.9 77 79.2
Cpa.g.sc92.93 Carica papaya HOM05D006499 ORTHO05D007874 4.8e-28 127.9 76 78.9
Psat6g099520 Pisum sativum HOM05D006499 ORTHO05D007874 4.8e-28 127.9 76 78.9
SEGI_40434 Sequoiadendron giganteum HOM05D006499 ORTHO05D007874 4.8e-28 127.9 81 75.3
MELO3C011747.2 Cucumis melo HOM05D000045 ORTHO05D007874 8.3e-28 127.1 76 80.3
Prupe.1G348500 Prunus persica HOM05D006499 ORTHO05D007874 8.3e-28 127.1 77 77.9
A02p41090 Brassica napus HOM05D006499 ORTHO05D007874 1.8e-27 125.9 77 77.9
C02p60950 Brassica napus HOM05D006499 ORTHO05D007874 1.8e-27 125.9 77 77.9
BolC2t12145H Brassica oleracea HOM05D006499 ORTHO05D007874 1.8e-27 125.9 77 77.9
BraA02t09053Z Brassica rapa HOM05D006499 ORTHO05D007874 1.8e-27 125.9 77 77.9
CsaV3_5G006120 Cucumis sativus L. HOM05D000045 ORTHO05D007874 1.8e-27 125.9 76 78.9
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 1.8e-27 125.9 83 72.3
AT5G23230 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 2.4e-27 125.6 77 77.9
COL.COLO4_33044 Corchorus olitorius HOM05D006499 ORTHO05D007874 3.1e-27 125.2 76 75.0
ClCG02G014040 Citrullus lanatus HOM05D006499 ORTHO05D007874 5.4e-27 124.4 77 77.9
COL.COLO4_06169 Corchorus olitorius HOM05D006499 ORTHO05D007874 5.4e-27 124.4 77 75.3
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 5.4e-27 124.4 92 67.4
THA.LOC104800852 Tarenaya hassleriana HOM05D006499 ORTHO05D007874 7.0e-27 124.0 75 80.0
Sp2g23920 Schrenkiella parvula HOM05D006499 ORTHO05D007874 9.1e-27 123.6 77 75.3
Duzib132G0016 Durio zibethinus HOM05D006499 ORTHO05D007874 1.2e-26 123.2 79 73.4
Zm00001eb076800 Zea mays HOM05D006499 ORTHO05D007874 1.6e-26 122.9 80 76.2
ECA236G1709 Erigeron canadensis HOM05D006499 ORTHO05D007874 2.0e-26 122.5 78 76.9
AL6G34450 Arabidopsis lyrata HOM05D006499 ORTHO05D007874 2.7e-26 122.1 77 76.6
Carub.0006s2100 Capsella rubella HOM05D006499 ORTHO05D007874 3.5e-26 121.7 81 70.4
Gohir.D02G188400 Gossypium hirsutum HOM05D006499 ORTHO05D007874 3.5e-26 121.7 77 72.7
Gorai.005G211100 Gossypium raimondii HOM05D006499 ORTHO05D007874 3.5e-26 121.7 77 72.7
Gohir.A03G165200 Gossypium hirsutum HOM05D006499 ORTHO05D007874 4.5e-26 121.3 77 72.7
Sed0001124 Sechium edule HOM05D006499 ORTHO05D007874 4.5e-26 121.3 77 76.6
FAN12G4256 Fragaria x ananassa HOM05D006499 ORTHO05D007874 5.9e-26 120.9 86 75.6
SMO116G0488 Selaginella moellendorffii HOM05D006499 ORTHO05D007874 5.9e-26 120.9 88 68.2
ATR0618G206 Amborella trichopoda HOM05D006499 ORTHO05D007874 1.0e-25 120.2 80 72.5
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 1.0e-25 120.2 78 75.6
AT5G23220 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 1.3e-25 119.8 76 73.7
CANSAT01G2706 Cannabis sativa HOM05D006499 ORTHO05D007874 1.3e-25 119.8 76 76.3
Duzib132G0405 Durio zibethinus HOM05D006499 ORTHO05D007874 2.3e-25 119.0 76 71.1
Lalb_Chr10g0094911 Lupinus albus HOM05D006499 ORTHO05D007874 2.3e-25 119.0 72 76.4
arahy.Tifrunner.gnm1.ann1.BULB93 Arachis hypogaea HOM05D006499 ORTHO05D007874 3.8e-25 118.2 65 89.2
GSVIVG01026240001 Vitis vinifera HOM05D006499 ORTHO05D007874 3.8e-25 118.2 72 76.4
SHI02178 Sapria himalayana HOM05D006499 ORTHO05D007874 8.0e-23 110.5 72 72.2
Pp3c12_9010 Physcomitrium patens HOM05D006499 ORTHO05D007874 1.8e-22 109.4 88 63.6
arahy.Tifrunner.gnm1.ann1.YHJY2A Arachis hypogaea HOM05D006499 ORTHO05D007874 5.2e-22 107.8 77 70.1
CBR_g16977 Chara braunii HOM05D006499 ORTHO05D007874 3.4e-21 105.1 87 62.1
Mapoly0180s0008 Marchantia polymorpha HOM05D006499 ORTHO05D007874 5.7e-21 104.4 71 70.4
TAR622G0494 Trochodendron aralioides HOM05D006499 ORTHO05D007874 4.9e-20 101.3 69 72.5
Medtr1g037850 Medicago truncatula HOM05D006499 ORTHO05D007874 2.7e-18 95.5 58 72.4
PGR044G1944 Punica granatum HOM05D006499 ORTHO05D007874 2.3e-14 82.4 70 67.1
Nn5g28518 Nelumbo nucifera HOM05D006499 ORTHO05D007874 3.4e-13 78.6 54 70.4
Sc06g0006830 Simmondsia chinensis HOM05D006499 ORTHO05D007874 2.3e-09 65.9 37 83.8


User provided reference genes

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