Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1999.1 Capsicum annuum HOM05D001412 ORTHO05D115383 1.8e-99 365.9 182 100.0
Solyc05g055780.4 Solanum lycopersicum HOM05D001412 ORTHO05D002473 9.6e-13 77.8 99 45.5
Sopen05g034190 Solanum pennellii HOM05D001412 ORTHO05D002473 9.6e-13 77.8 99 45.5
BcaC07g41250 Brassica carinata HOM05D001412 ORTHO05D002473 1.3e-12 77.4 99 45.5
C08p42560 Brassica napus HOM05D001412 ORTHO05D002473 1.3e-12 77.4 99 45.5
BolC8t51817H Brassica oleracea HOM05D001412 ORTHO05D002473 1.3e-12 77.4 99 45.5
Peaxi162Scf00028g00412 Petunia axillaris HOM05D001412 ORTHO05D002473 2.1e-12 76.6 99 44.4
Sed0016179 Sechium edule HOM05D001412 ORTHO05D002473 2.1e-12 76.6 99 44.4
Actinidia25245 Actinidia chinensis HOM05D001412 ORTHO05D002473 2.8e-12 76.3 99 43.4
AL3G48760 Arabidopsis lyrata HOM05D001412 ORTHO05D002473 2.8e-12 76.3 99 44.4
AT2G19490 Arabidopsis thaliana HOM05D001412 ORTHO05D002473 2.8e-12 76.3 99 44.4
BcaB03g16735 Brassica carinata HOM05D001412 ORTHO05D002473 2.8e-12 76.3 99 44.4
BcaB08g34868 Brassica carinata HOM05D001412 ORTHO05D002473 2.8e-12 76.3 99 44.4
BcaC06g36589 Brassica carinata HOM05D001412 ORTHO05D002473 2.8e-12 76.3 99 44.4
A07p01290 Brassica napus HOM05D001412 ORTHO05D002473 2.8e-12 76.3 99 44.4
C07p02580 Brassica napus HOM05D001412 ORTHO05D002473 2.8e-12 76.3 99 44.4
BolC7t40656H Brassica oleracea HOM05D001412 ORTHO05D002473 2.8e-12 76.3 99 44.4
BraA07t27919Z Brassica rapa HOM05D001412 ORTHO05D002473 2.8e-12 76.3 99 44.4
Carub.0003s3378 Capsella rubella HOM05D001412 ORTHO05D002473 2.8e-12 76.3 99 44.4
Thhalv10022701m.g Eutrema salsugineum HOM05D001412 ORTHO05D002473 2.8e-12 76.3 99 44.4
Sp3g32870 Schrenkiella parvula HOM05D001412 ORTHO05D002473 2.8e-12 76.3 99 44.4
A09p59300 Brassica napus HOM05D001412 ORTHO05D002473 3.6e-12 75.9 99 44.4
BraA09t41312Z Brassica rapa HOM05D001412 ORTHO05D002473 3.6e-12 75.9 99 44.4
QL02p062340 Quercus lobata HOM05D001412 ORTHO05D002473 3.6e-12 75.9 99 44.4
Cfa003069 Carpinus fangiana HOM05D001412 ORTHO05D002473 4.8e-12 75.5 99 43.4
Haze_25926 Corylus avellana HOM05D001412 ORTHO05D002473 4.8e-12 75.5 99 43.4
Hma1.2p1_0672F.1_g201100 Hydrangea macrophylla HOM05D001412 ORTHO05D002473 4.8e-12 75.5 99 43.4
Hma1.2p1_1838F.1_g304850 Hydrangea macrophylla HOM05D001412 ORTHO05D002473 4.8e-12 75.5 99 43.4
Lj4A294T56 Lonicera japonica HOM05D001412 ORTHO05D002473 4.8e-12 75.5 99 43.4
TWI63G0787 Tripterygium wilfordii HOM05D001412 ORTHO05D002473 4.8e-12 75.5 99 44.4
GSVIVG01015188001 Vitis vinifera HOM05D001412 ORTHO05D002473 4.8e-12 75.5 99 43.4
CiPaw.04G148400 Carya illinoinensis HOM05D001412 ORTHO05D002473 6.2e-12 75.1 99 42.4
Sed0000909 Sechium edule HOM05D001412 ORTHO05D002473 6.2e-12 75.1 99 42.4
Thecc.09G087100 Theobroma cacao HOM05D001412 ORTHO05D002473 6.2e-12 75.1 99 42.4
TAR629G0305 Trochodendron aralioides HOM05D001412 ORTHO05D002473 6.2e-12 75.1 99 43.4
CARHR109930 Cardamine hirsuta HOM05D001412 ORTHO05D002473 8.1e-12 74.7 101 43.6
Dinv36777 Davidia involucrata HOM05D001412 ORTHO05D002473 8.1e-12 74.7 99 42.4
Lj4g0010593 Lotus japonicus HOM05D001412 ORTHO05D002473 8.1e-12 74.7 99 43.4
Lalb_Chr07g0180891 Lupinus albus HOM05D001412 ORTHO05D002473 8.1e-12 74.7 99 42.4
PGR142G2286 Punica granatum HOM05D001412 ORTHO05D002473 8.1e-12 74.7 99 42.4
arahy.Tifrunner.gnm1.ann1.HY2LYN Arachis hypogaea HOM05D001412 ORTHO05D002473 1.1e-11 74.3 99 43.4
arahy.Tifrunner.gnm1.ann1.Y11TJZ Arachis hypogaea HOM05D001412 ORTHO05D002473 1.1e-11 74.3 99 43.4
COL.COLO4_18188 Corchorus olitorius HOM05D001412 ORTHO05D002473 1.1e-11 74.3 99 42.4
Medtr4g126040 Medicago truncatula HOM05D001412 ORTHO05D002473 1.1e-11 74.3 99 42.4
TPR.G9470 Trifolium pratense HOM05D001412 ORTHO05D002473 1.1e-11 74.3 99 42.4
arahy.Tifrunner.gnm1.ann1.D3QW6U Arachis hypogaea HOM05D001412 ORTHO05D002473 1.4e-11 73.9 99 43.4
arahy.Tifrunner.gnm1.ann1.K2HVP1 Arachis hypogaea HOM05D001412 ORTHO05D002473 1.4e-11 73.9 99 43.4
Cpa.g.sc61.12 Carica papaya HOM05D001412 ORTHO05D002473 1.4e-11 73.9 99 42.4
Lj6g0021045 Lotus japonicus HOM05D001412 ORTHO05D002473 1.4e-11 73.9 99 42.4
Medtr2g039670 Medicago truncatula HOM05D001412 ORTHO05D002473 1.4e-11 73.9 99 42.4
Phvul.009G231500 Phaseolus vulgaris HOM05D001412 ORTHO05D002473 1.4e-11 73.9 131 38.9
TPR.G13421 Trifolium pratense HOM05D001412 ORTHO05D002473 1.4e-11 73.9 99 42.4
VMungo1309G0772 Vigna mungo HOM05D001412 ORTHO05D002473 1.4e-11 73.9 99 43.4
ATR0582G297 Amborella trichopoda HOM05D001412 ORTHO05D002473 1.8e-11 73.6 99 42.4
Glyma.09G064300 Glycine max HOM05D001412 ORTHO05D002473 1.8e-11 73.6 99 42.4
MBI07_g07552_MAGBIO Magnolia biondii HOM05D001412 ORTHO05D002473 1.8e-11 73.6 99 42.4
MD15G1209000 Malus domestica HOM05D001412 ORTHO05D002473 1.8e-11 73.6 99 42.4
Duzib150G1378 Durio zibethinus HOM05D001412 ORTHO05D002473 2.4e-11 73.2 70 55.7
Glyma.15G170600 Glycine max HOM05D001412 ORTHO05D002473 2.4e-11 73.2 99 41.4
Psat1g140080 Pisum sativum HOM05D001412 ORTHO05D002473 2.4e-11 73.2 99 42.4
RcHm_v2.0_Chr2g0093621 Rosa chinensis HOM05D001412 ORTHO05D002473 2.4e-11 73.2 99 42.4
THA.LOC104814625 Tarenaya hassleriana HOM05D001412 ORTHO05D002473 2.4e-11 73.2 101 42.6
FvH4_1g07730 Fragaria vesca HOM05D001412 ORTHO05D002473 3.1e-11 72.8 99 42.4
FAN19G1811 Fragaria x ananassa HOM05D001412 ORTHO05D002473 3.1e-11 72.8 99 42.4
FAN26G1529 Fragaria x ananassa HOM05D001412 ORTHO05D002473 3.1e-11 72.8 99 42.4
Lalb_Chr08g0232301 Lupinus albus HOM05D001412 ORTHO05D002473 3.1e-11 72.8 99 41.4
Atru.chr7.1615 Acer truncatum HOM05D001412 ORTHO05D002473 4.0e-11 72.4 99 41.4
CAN.G694.21 Capsicum annuum HOM05D001412 ORTHO05D002473 4.0e-11 72.4 102 44.1
Ca_02171_v3 Cicer arietinum L. HOM05D001412 ORTHO05D002473 4.0e-11 72.4 99 40.4
DCAR_024711 Daucus carota HOM05D001412 ORTHO05D001460 4.0e-11 72.4 99 43.4
Glyma.17G053900 Glycine max HOM05D001412 ORTHO05D002473 4.0e-11 72.4 99 41.4
Aa31LG8G16510 Aethionema arabicum HOM05D001412 ORTHO05D002473 5.3e-11 72.0 99 44.4
Eucgr.C00874 Eucalyptus grandis HOM05D001412 ORTHO05D002473 5.3e-11 72.0 101 41.6
Rhsim03G0231500 Rhododendron simsii HOM05D001412 ORTHO05D002473 5.3e-11 72.0 99 41.4
Cc06_g11530 Coffea canephora HOM05D001412 ORTHO05D002473 6.9e-11 71.6 99 43.4
Dinv42330 Davidia involucrata HOM05D001412 ORTHO05D002473 6.9e-11 71.6 99 41.4
Hund06670 Selenicereus undatus HOM05D001412 ORTHO05D002473 6.9e-11 71.6 99 40.4
CDE05G3162 Ceratophyllum demersum HOM05D001412 ORTHO05D002473 9.0e-11 71.2 70 52.9
Ciclev10008716m.g Citrus clementina HOM05D001412 ORTHO05D002473 9.0e-11 71.2 99 43.4
Migut.L01503 Erythranthe guttata HOM05D001412 ORTHO05D002473 9.0e-11 71.2 70 54.3
FAN23G2148 Fragaria x ananassa HOM05D001412 ORTHO05D002473 9.0e-11 71.2 101 41.6
FAN26G1795 Fragaria x ananassa HOM05D001412 ORTHO05D002473 9.0e-11 71.2 101 41.6
Gohir.A13G193100 Gossypium hirsutum HOM05D001412 ORTHO05D002473 9.0e-11 71.2 99 43.4
Gorai.013G227300 Gossypium raimondii HOM05D001412 ORTHO05D002473 9.0e-11 71.2 99 43.4
Phvul.003G135600 Phaseolus vulgaris HOM05D001412 ORTHO05D002473 9.0e-11 71.2 99 41.4
Rhsim05G0018500 Rhododendron simsii HOM05D001412 ORTHO05D002473 9.0e-11 71.2 99 43.4
vmacro17255 Vaccinium macrocarpon HOM05D001412 ORTHO05D002473 9.0e-11 71.2 99 43.4
Actinidia29907 Actinidia chinensis HOM05D001412 ORTHO05D002473 1.2e-10 70.9 138 37.0
MSTRG.10553 Avicennia marina HOM05D001412 ORTHO05D002473 1.2e-10 70.9 99 42.4
CSS0042918 Camellia sinensis var. sinensis HOM05D001412 ORTHO05D002473 1.2e-10 70.9 99 42.4
CSS0044456 Camellia sinensis var. sinensis HOM05D001412 ORTHO05D002473 1.2e-10 70.9 99 42.4
Eucgr.C03475 Eucalyptus grandis HOM05D001412 ORTHO05D002473 1.2e-10 70.9 70 51.4
FAN28G0937 Fragaria x ananassa HOM05D001412 ORTHO05D002473 1.2e-10 70.9 101 40.6
Os01g0901200 Oryza sativa ssp. japonica HOM05D001412 ORTHO05D002473 1.2e-10 70.9 99 39.4
TAR622G0136 Trochodendron aralioides HOM05D005263 ORTHO05D006891 1.2e-10 70.9 99 42.4
HPP92_002720 Vanilla planifolia HOM05D001412 ORTHO05D002473 1.2e-10 70.9 70 52.9
CiPaw.03G214000 Carya illinoinensis HOM05D001412 ORTHO05D002473 1.5e-10 70.5 70 52.9
Manes.03G035200 Manihot esculenta HOM05D001412 ORTHO05D002473 1.5e-10 70.5 99 41.4
Prupe.7G207400 Prunus persica HOM05D001412 ORTHO05D002473 1.5e-10 70.5 99 40.4
SHI05040 Sapria himalayana HOM05D001412 ORTHO05D002473 1.5e-10 70.5 99 42.4
CDE05G3022 Ceratophyllum demersum HOM05D001412 ORTHO05D002473 2.0e-10 70.1 70 51.4
ECA236G3807 Erigeron canadensis HOM05D001412 ORTHO05D002473 2.0e-10 70.1 124 37.9
Migut.J00582 Erythranthe guttata HOM05D001412 ORTHO05D002473 2.0e-10 70.1 70 52.9
Gohir.A06G073300 Gossypium hirsutum HOM05D001412 ORTHO05D002473 2.0e-10 70.1 99 43.4
Gohir.D06G072000 Gossypium hirsutum HOM05D001412 ORTHO05D002473 2.0e-10 70.1 99 43.4
Gorai.010G084000 Gossypium raimondii HOM05D001412 ORTHO05D002473 2.0e-10 70.1 99 43.4
MD02G1081700 Malus domestica HOM05D001412 ORTHO05D002473 2.0e-10 70.1 70 52.9
Gohir.D13G198400 Gossypium hirsutum HOM05D001412 ORTHO05D002473 2.6e-10 69.7 99 42.4
TWI32G1321 Tripterygium wilfordii HOM05D001412 ORTHO05D002473 3.4e-10 69.3 70 51.4
unitig_578.g16417 Utricularia gibba HOM05D001412 ORTHO05D002473 3.4e-10 69.3 115 39.1
Manes.03G031097 Manihot esculenta HOM05D001412 ORTHO05D002473 4.5e-10 68.9 70 51.4
Manes.16G100900 Manihot esculenta HOM05D001412 ORTHO05D002473 4.5e-10 68.9 99 42.4
Actinidia38452 Actinidia chinensis HOM05D001412 ORTHO05D002473 5.8e-10 68.6 99 41.4
vmacro06299 Vaccinium macrocarpon HOM05D001412 ORTHO05D002473 5.8e-10 68.6 99 40.4
Aqoxy5G03005 Aquilegia oxysepala HOM05D001412 ORTHO05D002473 7.6e-10 68.2 70 52.9
DCAR_011966 Daucus carota HOM05D001412 ORTHO05D002473 7.6e-10 68.2 99 41.4
HanXRQChr06g0178581 Helianthus annuus HOM05D001412 ORTHO05D002473 9.9e-10 67.8 124 38.7
Hma1.2p1_0476F.1_g160810 Hydrangea macrophylla HOM05D001412 ORTHO05D002473 9.9e-10 67.8 87 46.0
SEGI_37152 Sequoiadendron giganteum HOM05D001412 ORTHO05D002473 9.9e-10 67.8 131 38.2
EL10Ac8g19189 Beta vulgaris HOM05D001412 ORTHO05D002473 1.7e-09 67.0 70 48.6
Os11g0302700 Oryza sativa ssp. japonica HOM05D001412 ORTHO05D002473 1.7e-09 67.0 122 34.4
HanXRQChr04g0126181 Helianthus annuus HOM05D001412 ORTHO05D002473 2.2e-09 66.6 124 38.7
Lsat_1_v5_gn_8_86900 Lactuca sativa HOM05D001412 ORTHO05D002473 2.2e-09 66.6 124 38.7
Potri.006G148700 Populus trichocarpa HOM05D001412 ORTHO05D002473 2.9e-09 66.2 99 40.4
Potri.018G067900 Populus trichocarpa HOM05D001412 ORTHO05D002473 2.9e-09 66.2 99 40.4
AUR62029049 Chenopodium quinoa HOM05D001412 ORTHO05D002473 4.9e-09 65.5 99 38.4
Sabra06G0117600 Salix brachista HOM05D001412 ORTHO05D002473 4.9e-09 65.5 101 40.6
Zm00001eb144420 Zea mays HOM05D001412 ORTHO05D002473 4.9e-09 65.5 114 37.7
Zm00001eb365600 Zea mays HOM05D001412 ORTHO05D002473 4.9e-09 65.5 118 36.4
AUR62033945 Chenopodium quinoa HOM05D001412 ORTHO05D002473 6.4e-09 65.1 99 38.4
Ah.14g085150 Amaranthus hybridus HOM05D001412 ORTHO05D002473 8.4e-09 64.7 99 38.4
ClCG11G001720 Citrullus lanatus HOM05D001412 ORTHO05D002473 8.4e-09 64.7 99 41.4
MELO3C031352.2 Cucumis melo HOM05D001412 ORTHO05D002473 8.4e-09 64.7 99 40.4
CsaV3_2G001420 Cucumis sativus L. HOM05D001412 ORTHO05D002473 8.4e-09 64.7 99 40.4
Sc18g0002180 Simmondsia chinensis HOM05D001412 ORTHO05D002473 8.4e-09 64.7 99 38.4
Sc14g0000710 Simmondsia chinensis HOM05D001412 ORTHO05D002473 1.4e-08 63.9 99 38.4
Nitab4.5_0006126g0010 Nicotiana tabacum HOM05D001412 ORTHO05D002473 1.9e-08 63.5 118 36.4
AagrBONN_evm.TU.Sc2ySwM_362.1779 Anthoceros agrestis HOM05D001412 ORTHO05D002473 2.4e-08 63.2 70 47.1
Sabra18G0059500 Salix brachista HOM05D001412 ORTHO05D002473 2.4e-08 63.2 70 52.9
ClCG03G015460 Citrullus lanatus HOM05D001412 ORTHO05D002473 1.2e-07 60.8 70 45.7
PSO017G0435 Papaver somniferum HOM05D001412 ORTHO05D002473 1.2e-07 60.8 70 45.7
PSO478G3238 Papaver somniferum HOM05D001412 ORTHO05D002473 1.2e-07 60.8 70 45.7
PGSC0003DMG400023358 Solanum tuberosum HOM05D001412 ORTHO05D002473 2.1e-07 60.1 142 32.4
Ca_21284_v3 Cicer arietinum L. HOM05D001412 ORTHO05D002473 2.7e-07 59.7 84 41.7
Mapoly0006s0306 Marchantia polymorpha HOM05D001412 ORTHO05D002473 4.6e-07 58.9 71 49.3
VMungo1215G0238 Vigna mungo HOM05D001412 ORTHO05D002473 4.6e-07 58.9 100 38.0
PRCOL_00003016 Prasinoderma coloniale HOM05D001412 ORTHO05D002473 3.9e-06 55.8 93 38.7
MELO3C004628.2 Cucumis melo HOM05D001412 ORTHO05D002473 8.7e-06 54.7 91 36.3
Duzib168G0737 Durio zibethinus HOM05D001412 ORTHO05D002473 8.7e-06 54.7 76 39.5
Oeu006023.1 Olea europaea HOM05D001412 ORTHO05D002473 8.7e-06 54.7 122 32.8
Sed0001537 Sechium edule HOM05D001412 ORTHO05D002473 8.7e-06 54.7 125 32.0


User provided reference genes

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