Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1971.3 Capsicum annuum HOM05D001578 ORTHO05D001207 1.1e-44 183.0 93 100.0
CAN.G305.59 Capsicum annuum HOM05D001578 ORTHO05D001207 1.0e-39 166.4 92 91.3
CAN.G1359.1 Capsicum annuum HOM05D001578 ORTHO05D001207 3.2e-36 154.8 93 86.0
Peaxi162Scf01160g00142 Petunia axillaris HOM05D001578 ORTHO05D001207 5.1e-26 120.9 92 68.5
CAN.G484.68 Capsicum annuum HOM05D001578 ORTHO05D001207 3.3e-25 118.2 95 66.3
PGSC0003DMG400004618 Solanum tuberosum HOM05D001578 ORTHO05D001207 4.3e-25 117.9 92 67.4
Solyc12g099210.2 Solanum lycopersicum HOM05D001578 ORTHO05D001207 9.5e-25 116.7 92 67.4
Sopen12g033890 Solanum pennellii HOM05D001578 ORTHO05D001207 9.5e-25 116.7 92 67.4
Solyc12g099200.2 Solanum lycopersicum HOM05D001578 ORTHO05D001207 1.2e-24 116.3 95 66.3
Sopen12g033880 Solanum pennellii HOM05D001578 ORTHO05D001207 1.6e-24 115.9 95 66.3
PGSC0003DMG400004617 Solanum tuberosum HOM05D001578 ORTHO05D001207 1.6e-24 115.9 95 66.3
Nitab4.5_0000651g0280 Nicotiana tabacum HOM05D001578 ORTHO05D001207 1.3e-21 106.3 91 62.6
Nitab4.5_0004165g0070 Nicotiana tabacum HOM05D001578 ORTHO05D001207 2.7e-19 98.6 75 69.3
CAN.G1075.28 Capsicum annuum HOM05D001578 ORTHO05D001207 3.9e-18 94.7 93 59.1
Nitab4.5_0002150g0080 Nicotiana tabacum HOM05D001578 ORTHO05D001207 5.1e-18 94.4 92 58.7
Dinv44262 Davidia involucrata HOM05D001578 ORTHO05D001207 8.4e-13 77.0 92 47.8
Oeu016575.1 Olea europaea HOM05D001578 ORTHO05D001207 1.4e-12 76.3 82 51.2
Dinv18323 Davidia involucrata HOM05D000034 ORTHO05D000277 1.9e-12 75.9 93 46.2
Cc03_g00600 Coffea canephora HOM05D001578 ORTHO05D001207 4.2e-12 74.7 92 48.9
Peaxi162Scf00364g00014 Petunia axillaris HOM05D001578 ORTHO05D001207 1.2e-11 73.2 87 47.1
Sabra10G0043600 Salix brachista HOM05D001578 ORTHO05D001207 1.6e-11 72.8 86 52.3
CSS0020686 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 2.1e-11 72.4 82 51.2
Aa31LG10G5830 Aethionema arabicum HOM05D001578 ORTHO05D001207 2.7e-11 72.0 76 48.7
CAN.G1692.2 Capsicum annuum HOM05D001578 ORTHO05D001207 2.7e-11 72.0 92 47.8
Peaxi162Scf00548g00645 Petunia axillaris HOM05D001578 ORTHO05D001207 2.7e-11 72.0 80 47.5
CSS0012414 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 7.8e-11 70.5 82 50.0
Cfa015283 Carpinus fangiana HOM05D001578 ORTHO05D001207 1.3e-10 69.7 87 44.8
Sabra10G0043700 Salix brachista HOM05D001578 ORTHO05D001207 1.3e-10 69.7 79 51.9
Glyma.07G237300 Glycine max HOM05D001578 ORTHO05D001207 2.3e-10 68.9 91 40.7
TPR.G25401 Trifolium pratense HOM05D001578 ORTHO05D001207 2.3e-10 68.9 92 44.6
Carub.0001s3704 Capsella rubella HOM05D001578 ORTHO05D001207 3.0e-10 68.6 86 44.2
Ca_21410_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 3.0e-10 68.6 82 46.3
AL1G54460 Arabidopsis lyrata HOM05D001578 ORTHO05D001207 3.9e-10 68.2 86 45.3
SalBow8G1966 Salvia bowleyana HOM05D001578 ORTHO05D001207 3.9e-10 68.2 84 42.9
SalBow8G3310 Salvia bowleyana HOM05D001578 ORTHO05D001207 3.9e-10 68.2 84 42.9
TWI53G0804 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 3.9e-10 68.2 79 50.6
BcaB07g33804 Brassica carinata HOM05D001578 ORTHO05D001207 5.1e-10 67.8 82 46.3
CARHR037580 Cardamine hirsuta HOM05D001578 ORTHO05D001207 5.1e-10 67.8 86 44.2
Haze_01334 Corylus avellana HOM05D001578 ORTHO05D001207 5.1e-10 67.8 86 41.9
Haze_01339 Corylus avellana HOM05D001578 ORTHO05D001207 5.1e-10 67.8 86 41.9
VMungo1215G0431 Vigna mungo HOM05D001578 ORTHO05D001207 5.1e-10 67.8 91 42.9
Glyma.17G036400 Glycine max HOM05D001578 ORTHO05D001207 8.7e-10 67.0 90 44.4
Lalb_Chr07g0181931 Lupinus albus HOM05D001578 ORTHO05D001207 8.7e-10 67.0 83 41.0
BcaC08g42990 Brassica carinata HOM05D001578 ORTHO05D001207 1.1e-09 66.6 80 46.2
C06p02320 Brassica napus HOM05D001578 ORTHO05D001207 1.1e-09 66.6 80 46.2
BolC6t35358H Brassica oleracea HOM05D001578 ORTHO05D001207 1.1e-09 66.6 80 46.2
Manes.15G002100 Manihot esculenta HOM05D001578 ORTHO05D001207 1.1e-09 66.6 82 46.3
MSTRG.16314 Avicennia marina HOM05D001578 ORTHO05D001207 1.9e-09 65.9 93 40.9
BraA06t23683Z Brassica rapa HOM05D001578 ORTHO05D001207 1.9e-09 65.9 80 45.0
Thhalv10011825m.g Eutrema salsugineum HOM05D001578 ORTHO05D001207 1.9e-09 65.9 80 45.0
Medtr4g122890 Medicago truncatula HOM05D001578 ORTHO05D001207 1.9e-09 65.9 92 42.4
MSTRG.24829 Avicennia marina HOM05D001578 ORTHO05D001207 2.5e-09 65.5 97 42.3
A06p04790 Brassica napus HOM05D001578 ORTHO05D001207 2.5e-09 65.5 80 45.0
Potri.010G063000 Populus trichocarpa HOM05D001578 ORTHO05D001207 2.5e-09 65.5 82 48.8
TPR.G25397 Trifolium pratense HOM05D001578 ORTHO05D001207 2.5e-09 65.5 82 43.9
Medtr4g122800 Medicago truncatula HOM05D001578 ORTHO05D001207 3.3e-09 65.1 82 43.9
Psat0s2823g0080 Pisum sativum HOM05D001578 ORTHO05D001207 3.3e-09 65.1 82 45.1
Lsat_1_v5_gn_6_301 Lactuca sativa HOM05D001578 ORTHO05D001207 4.3e-09 64.7 91 44.0
TPR.G25429 Trifolium pratense HOM05D001578 ORTHO05D001207 4.3e-09 64.7 92 41.3
Glyma.17G036300 Glycine max HOM05D001578 ORTHO05D001207 5.6e-09 64.3 92 35.9
Lj3P834T42 Lonicera japonica HOM05D001578 ORTHO05D001207 5.6e-09 64.3 92 46.7
ECA233G5780 Erigeron canadensis HOM05D001578 ORTHO05D001207 7.3e-09 63.9 84 45.2
Lsat_1_v5_gn_5_185380 Lactuca sativa HOM05D001578 ORTHO05D001207 9.6e-09 63.5 82 42.7
Lsat_1_v5_gn_7_59300 Lactuca sativa HOM05D001578 ORTHO05D001207 9.6e-09 63.5 82 43.9
Lsat_1_v5_gn_7_59360 Lactuca sativa HOM05D001578 ORTHO05D001207 9.6e-09 63.5 82 43.9
Lsat_1_v5_gn_7_59420 Lactuca sativa HOM05D001578 ORTHO05D001207 9.6e-09 63.5 82 43.9
QL06p012845 Quercus lobata HOM05D001578 ORTHO05D001207 9.6e-09 63.5 88 42.0
Actinidia18466 Actinidia chinensis HOM05D001578 ORTHO05D001207 1.3e-08 63.2 93 44.1
Prupe.1G114500 Prunus persica HOM05D001578 ORTHO05D001207 1.3e-08 63.2 80 42.5
FAN07G2152 Fragaria x ananassa HOM05D001578 ORTHO05D001207 1.6e-08 62.8 80 43.8
HanXRQChr13g0395221 Helianthus annuus HOM05D001578 ORTHO05D001207 1.6e-08 62.8 84 42.9
Lsat_1_v5_gn_5_185420 Lactuca sativa HOM05D001578 ORTHO05D001207 1.6e-08 62.8 82 42.7
MD13G1150200 Malus domestica HOM05D001578 ORTHO05D001207 1.6e-08 62.8 92 43.5
Migut.M01936 Erythranthe guttata HOM05D001578 ORTHO05D001207 2.1e-08 62.4 81 40.7
MD13G1150400 Malus domestica HOM05D001578 ORTHO05D001207 2.1e-08 62.4 79 38.0
MD16G1150100 Malus domestica HOM05D001578 ORTHO05D001207 2.8e-08 62.0 78 41.0
Ca_21409_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 3.6e-08 61.6 84 39.3
Ca_21424_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 3.6e-08 61.6 84 39.3
Ca_21425_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 3.6e-08 61.6 84 39.3
Phvul.003G117100 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 3.6e-08 61.6 92 40.2
CAN.G13.19 Capsicum annuum HOM05D001578 ORTHO05D001207 4.8e-08 61.2 41 78.0
Glyma.20G029700 Glycine max HOM05D001578 ORTHO05D001207 4.8e-08 61.2 80 43.8
Manes.03G207100 Manihot esculenta HOM05D001578 ORTHO05D001207 4.8e-08 61.2 79 45.6
QL06p012837 Quercus lobata HOM05D001578 ORTHO05D001207 4.8e-08 61.2 88 40.9
AT1G47960 Arabidopsis thaliana HOM05D001578 ORTHO05D001207 6.2e-08 60.8 80 42.5
FvH4_4g20440 Fragaria vesca HOM05D001578 ORTHO05D001207 6.2e-08 60.8 80 43.8
FAN12G2021 Fragaria x ananassa HOM05D001578 ORTHO05D001207 6.2e-08 60.8 80 43.8
TWI75G0074 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 6.2e-08 60.8 88 36.4
Migut.N00031 Erythranthe guttata HOM05D001578 ORTHO05D001207 1.1e-07 60.1 82 46.3
Lj4g0009388 Lotus japonicus HOM05D001578 ORTHO05D001207 1.1e-07 60.1 93 37.6
Phvul.003G117400 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 1.1e-07 60.1 80 41.2
MSTRG.24828 Avicennia marina HOM05D001578 ORTHO05D001207 1.4e-07 59.7 97 40.2
Glyma.20G028700 Glycine max HOM05D001578 ORTHO05D001207 1.4e-07 59.7 80 42.5
Glyma.20G029200 Glycine max HOM05D001578 ORTHO05D001207 1.4e-07 59.7 80 41.2
Glyma.20G029500 Glycine max HOM05D001578 ORTHO05D001207 1.4e-07 59.7 80 41.2
Nitab4.5_0002150g0010 Nicotiana tabacum HOM05D001578 ORTHO05D001207 1.4e-07 59.7 84 39.3
TPR.G25407 Trifolium pratense HOM05D001578 ORTHO05D001207 1.4e-07 59.7 84 36.9
unitig_748.g7375 Utricularia gibba HOM05D001578 ORTHO05D001207 1.4e-07 59.7 84 40.5
COL.COLO4_34577 Corchorus olitorius HOM05D001578 ORTHO05D001207 1.8e-07 59.3 93 35.5
MD16G1150600 Malus domestica HOM05D001578 ORTHO05D001207 1.8e-07 59.3 76 40.8
THA.LOC104820316 Tarenaya hassleriana HOM05D001578 ORTHO05D001207 1.8e-07 59.3 82 41.5
Thecc.04G305000 Theobroma cacao HOM05D001578 ORTHO05D001207 1.8e-07 59.3 94 36.2
CiPaw.01G135900 Carya illinoinensis HOM05D001578 ORTHO05D001207 2.4e-07 58.9 93 40.9
Lj3P834T43 Lonicera japonica HOM05D001578 ORTHO05D001207 2.4e-07 58.9 92 43.5
Psat0s4829g0040 Pisum sativum HOM05D001578 ORTHO05D001207 2.4e-07 58.9 92 41.3
VMungo1215G1199 Vigna mungo HOM05D001578 ORTHO05D001207 3.1e-07 58.5 92 39.1
C01p47100 Brassica napus HOM05D001578 ORTHO05D001207 4.0e-07 58.2 79 44.3
Lj4g0019348 Lotus japonicus HOM05D001578 ORTHO05D001207 4.0e-07 58.2 79 40.5
Peaxi162Scf00228g00064 Petunia axillaris HOM05D001578 ORTHO05D001207 4.0e-07 58.2 94 40.4
Potri.009G083500 Populus trichocarpa HOM05D001578 ORTHO05D001207 4.0e-07 58.2 80 36.2
Phvul.003G117200 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 5.3e-07 57.8 79 40.5
BcaC09g48670 Brassica carinata HOM05D001578 ORTHO05D001207 6.9e-07 57.4 79 44.3
COL.COLO4_34578 Corchorus olitorius HOM05D001578 ORTHO05D001207 6.9e-07 57.4 94 37.2
DCAR_023358 Daucus carota HOM05D001578 ORTHO05D001207 6.9e-07 57.4 92 39.1
Manes.02G201700 Manihot esculenta HOM05D001578 ORTHO05D001207 6.9e-07 57.4 88 35.2
Glyma.20G029000 Glycine max HOM05D001578 ORTHO05D001207 9.0e-07 57.0 80 40.0
HanXRQChr13g0395201 Helianthus annuus HOM05D001578 ORTHO05D001207 9.0e-07 57.0 84 40.5
Lalb_Chr07g0181941 Lupinus albus HOM05D001578 ORTHO05D001207 9.0e-07 57.0 92 35.9
Manes.15G098100 Manihot esculenta HOM05D001578 ORTHO05D001207 1.2e-06 56.6 89 34.8
Gohir.D10G180600 Gossypium hirsutum HOM05D001578 ORTHO05D001207 1.5e-06 56.2 95 37.9
Gorai.011G202100 Gossypium raimondii HOM05D001578 ORTHO05D001207 1.5e-06 56.2 95 37.9
Psat0s2818g0040 Pisum sativum HOM05D001578 ORTHO05D001207 1.5e-06 56.2 93 37.6
Solyc12g099190.1 Solanum lycopersicum HOM05D001578 ORTHO05D001207 1.5e-06 56.2 85 38.8
Sopen12g033870 Solanum pennellii HOM05D001578 ORTHO05D001207 1.5e-06 56.2 85 37.6
BcaB04g18932 Brassica carinata HOM05D001578 ORTHO05D001207 2.0e-06 55.8 86 44.2
COL.COLO4_34581 Corchorus olitorius HOM05D001578 ORTHO05D001207 2.0e-06 55.8 92 38.0
ECA233G4032 Erigeron canadensis HOM05D001578 ORTHO05D001207 2.0e-06 55.8 82 39.0
RcHm_v2.0_Chr4g0399701 Rosa chinensis HOM05D001578 ORTHO05D001207 2.0e-06 55.8 77 40.3
PGSC0003DMG400004616 Solanum tuberosum HOM05D001578 ORTHO05D001207 2.0e-06 55.8 85 38.8
Glyma.20G028900 Glycine max HOM05D001578 ORTHO05D001207 2.6e-06 55.5 80 41.2
Phvul.003G117300 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 2.6e-06 55.5 80 40.0
QL06p012826 Quercus lobata HOM05D001578 ORTHO05D001207 3.4e-06 55.1 92 37.0
Lalb_Chr20g0117771 Lupinus albus HOM05D001578 ORTHO05D001207 4.4e-06 54.7 79 41.8
Atru.chr4.3056 Acer truncatum HOM05D001578 ORTHO05D001207 5.8e-06 54.3 80 40.0
Gohir.A10G174050 Gossypium hirsutum HOM05D001578 ORTHO05D001207 5.8e-06 54.3 95 36.8
Cpa.g.sc9.25 Carica papaya HOM05D001578 ORTHO05D001207 7.6e-06 53.9 80 40.0
Gohir.A10G174100 Gossypium hirsutum HOM05D001578 ORTHO05D001207 7.6e-06 53.9 94 33.0
Gohir.D10G180700 Gossypium hirsutum HOM05D001578 ORTHO05D001207 7.6e-06 53.9 94 33.0
Gorai.011G202200 Gossypium raimondii HOM05D001578 ORTHO05D001207 7.6e-06 53.9 94 33.0
Thecc.04G304700 Theobroma cacao HOM05D001578 ORTHO05D001207 7.6e-06 53.9 92 37.0
CiPaw.01G135600 Carya illinoinensis HOM05D001578 ORTHO05D001207 9.9e-06 53.5 93 37.6
Lj6g0013229 Lotus japonicus HOM05D001578 ORTHO05D001207 9.9e-06 53.5 72 37.5
Lalb_Chr12g0200781 Lupinus albus HOM05D001578 ORTHO05D001207 9.9e-06 53.5 92 33.7


User provided reference genes

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