Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G195.33 Capsicum annuum HOM05D005798 ORTHO05D007269 1.9e-31 138.7 74 100.0
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 4.2e-23 110.9 72 81.9
CAN.G74.39 Capsicum annuum HOM05D005798 ORTHO05D007269 2.7e-22 108.2 72 79.2
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 1.7e-21 105.5 72 80.6
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 2.3e-21 105.1 72 77.8
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 3.0e-21 104.8 72 77.8
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 1.1e-18 96.3 72 73.6
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 3.1e-18 94.7 72 72.2
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 5.3e-18 94.0 71 73.2
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 1.5e-12 75.9 72 61.1
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 1.9e-12 75.5 72 58.3
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 3.3e-12 74.7 72 58.3
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 7.4e-12 73.6 72 58.3
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 7.4e-12 73.6 72 58.3
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 7.4e-12 73.6 76 60.5
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 7.4e-12 73.6 72 55.6
GSVIVG01018418001 Vitis vinifera HOM05D005798 ORTHO05D007269 9.6e-12 73.2 71 62.0
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 1.3e-11 72.8 72 58.3
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 3.7e-11 71.2 71 54.9
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 3.7e-11 71.2 72 58.3
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 4.8e-11 70.9 72 52.8
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 4.8e-11 70.9 71 60.6
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 6.2e-11 70.5 70 54.3
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 1.4e-10 69.3 72 58.3
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 1.8e-10 68.9 71 54.9
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 1.8e-10 68.9 71 59.2
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 2.4e-10 68.6 72 55.6
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 2.4e-10 68.6 71 56.3
Haze_02923 Corylus avellana HOM05D005798 ORTHO05D007269 3.1e-10 68.2 71 59.2
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 4.0e-10 67.8 71 52.1
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 4.0e-10 67.8 72 55.6
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 5.3e-10 67.4 74 55.4
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 5.3e-10 67.4 72 52.8
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 6.9e-10 67.0 70 58.6
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 6.9e-10 67.0 70 58.6
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 6.9e-10 67.0 72 51.4
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 9.0e-10 66.6 72 55.6
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 9.0e-10 66.6 72 52.8
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 9.0e-10 66.6 71 49.3
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 1.5e-09 65.9 72 50.0
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 2.0e-09 65.5 72 54.2
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 2.0e-09 65.5 72 51.4
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 2.0e-09 65.5 71 49.3
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 2.0e-09 65.5 72 52.8
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 2.6e-09 65.1 71 52.1
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 3.4e-09 64.7 72 54.2
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 5.8e-09 63.9 72 50.0
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 5.8e-09 63.9 72 51.4
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 5.8e-09 63.9 72 51.4
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 5.8e-09 63.9 72 55.6
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 5.8e-09 63.9 72 50.0
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 7.6e-09 63.5 72 51.4
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 7.6e-09 63.5 71 52.1
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.3e-08 62.8 70 54.3
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 1.3e-08 62.8 72 56.9
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 1.7e-08 62.4 71 53.5
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 2.2e-08 62.0 72 50.0
Prupe.2G112500 Prunus persica HOM05D005798 ORTHO05D007269 3.8e-08 61.2 71 52.1
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 4.9e-08 60.8 72 48.6
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 4.9e-08 60.8 71 56.3
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 4.9e-08 60.8 72 50.0
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 6.5e-08 60.5 71 49.3
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 8.4e-08 60.1 72 52.8
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 8.4e-08 60.1 71 52.1
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 8.4e-08 60.1 71 53.5
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 1.1e-07 59.7 72 52.8
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 1.4e-07 59.3 77 48.1
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 1.4e-07 59.3 72 47.2
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 1.4e-07 59.3 72 47.2
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 1.9e-07 58.9 72 52.8
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 3.2e-07 58.2 71 50.7
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 3.2e-07 58.2 72 51.4
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 4.2e-07 57.8 71 45.1
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 4.2e-07 57.8 72 48.6
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 4.2e-07 57.8 72 48.6
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 4.2e-07 57.8 70 47.1
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 1.2e-06 56.2 72 52.8
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 1.6e-06 55.8 71 49.3
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 1.6e-06 55.8 71 50.7
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 1.6e-06 55.8 71 50.7
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 1.6e-06 55.8 71 50.7
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 1.6e-06 55.8 71 50.7
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 1.6e-06 55.8 72 50.0
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 1.6e-06 55.8 71 46.5
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 1.6e-06 55.8 72 50.0
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 1.6e-06 55.8 70 45.7
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 2.1e-06 55.5 72 48.6
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 2.1e-06 55.5 71 49.3
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 2.7e-06 55.1 72 44.4
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 3.5e-06 54.7 70 45.7
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 3.5e-06 54.7 70 47.1
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 3.5e-06 54.7 70 47.1
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 3.5e-06 54.7 72 50.0
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 4.6e-06 54.3 73 50.7
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 6.0e-06 53.9 71 49.3


User provided reference genes

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