Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1940.1 Capsicum annuum HOM05D000203 ORTHO05D000135 1.2e-58 229.9 145 100.0
CAN.G1513.1 Capsicum annuum HOM05D000203 ORTHO05D000135 1.0e-49 200.3 138 94.2
CAN.G730.15 Capsicum annuum HOM05D000203 ORTHO05D000135 5.2e-46 188.0 168 77.4
CAN.G730.19 Capsicum annuum HOM05D000203 ORTHO05D000135 4.4e-45 184.9 168 77.4
CAN.G730.8 Capsicum annuum HOM05D000203 ORTHO05D000135 5.8e-45 184.5 168 76.8
CAN.G730.24 Capsicum annuum HOM05D000203 ORTHO05D000135 1.3e-44 183.3 170 68.2
CAN.G730.25 Capsicum annuum HOM05D000203 ORTHO05D000135 2.8e-39 165.6 126 70.6
CAN.G504.7 Capsicum annuum HOM05D000203 ORTHO05D000135 1.7e-36 156.4 170 55.9
CAN.G730.22 Capsicum annuum HOM05D000203 ORTHO05D000135 1.6e-34 149.8 152 73.0
CAN.G730.27 Capsicum annuum HOM05D000203 ORTHO05D000135 1.0e-33 147.1 111 91.0
CAN.G1041.22 Capsicum annuum HOM05D000203 ORTHO05D000135 1.5e-32 143.3 175 56.0
PGSC0003DMG400005119 Solanum tuberosum HOM05D000203 ORTHO05D000135 1.7e-28 129.8 163 50.3
Sopen01g049030 Solanum pennellii HOM05D000203 ORTHO05D000135 3.8e-28 128.6 163 49.7
Nitab4.5_0001477g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 8.4e-28 127.5 168 58.9
Nitab4.5_0005046g0030 Nicotiana tabacum HOM05D000203 ORTHO05D000135 8.4e-28 127.5 168 58.9
Solyc01g106700.3 Solanum lycopersicum HOM05D000203 ORTHO05D000135 1.1e-27 127.1 163 49.1
Nitab4.5_0003151g0030 Nicotiana tabacum HOM05D000203 ORTHO05D000135 1.6e-26 123.2 169 47.3
PGSC0003DMG400024799 Solanum tuberosum HOM05D000203 ORTHO05D000135 1.5e-24 116.7 182 51.1
Solyc04g064860.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 3.1e-22 109.0 184 49.5
Sopen04g026820 Solanum pennellii HOM05D000203 ORTHO05D000135 3.1e-22 109.0 182 47.8
Peaxi162Scf00274g00002 Petunia axillaris HOM05D000203 ORTHO05D000135 6.9e-22 107.8 168 43.5
CAN.G338.45 Capsicum annuum HOM05D000203 ORTHO05D000135 9.0e-22 107.5 162 44.4
CAN.G17.23 Capsicum annuum HOM05D000203 ORTHO05D000135 2.7e-18 95.9 162 50.6
CAN.G744.6 Capsicum annuum HOM05D000203 ORTHO05D000135 2.7e-18 95.9 161 40.4
Peaxi162Scf00152g00632 Petunia axillaris HOM05D000203 ORTHO05D000135 1.3e-15 87.0 176 50.6
Peaxi162Scf00100g00104 Petunia axillaris HOM05D000203 ORTHO05D000135 2.6e-13 79.3 166 44.6
Peaxi162Scf00553g00033 Petunia axillaris HOM05D000203 ORTHO05D000135 1.7e-12 76.6 161 50.9
Cc08_g09230 Coffea canephora HOM05D000203 ORTHO05D020489 1.9e-11 73.2 136 35.3
Peaxi162Scf00016g03256 Petunia axillaris HOM05D000203 ORTHO05D000135 7.9e-10 67.8 166 32.5
CAN.G730.3 Capsicum annuum HOM05D000203 ORTHO05D000135 3.9e-09 65.5 59 98.3
CAN.G730.6 Capsicum annuum HOM05D000203 ORTHO05D000135 3.9e-09 65.5 59 59.3
Hma1.2p1_0661F.1_g197950 Hydrangea macrophylla HOM05D000203 ORTHO05D000135 5.1e-09 65.1 104 37.5
Hma1.2p1_1758F.1_g301160 Hydrangea macrophylla HOM05D000203 ORTHO05D000135 5.1e-09 65.1 104 37.5
SalBow6G2791 Salvia bowleyana HOM05D000203 ORTHO05D000135 8.8e-09 64.3 110 36.4
Potri.017G040600 Populus trichocarpa HOM05D000203 ORTHO05D000135 1.5e-08 63.5 160 29.4
CAN.G2846.1 Capsicum annuum HOM05D000203 ORTHO05D000135 2.0e-08 63.2 59 96.6
Potri.017G039800 Populus trichocarpa HOM05D000203 ORTHO05D000135 2.0e-08 63.2 160 29.4
CAN.G730.10 Capsicum annuum HOM05D000203 ORTHO05D000135 2.5e-08 62.8 59 74.6
Oeu026465.1 Olea europaea HOM05D000203 ORTHO05D000135 5.7e-08 61.6 115 34.8
Cc02_g20240 Coffea canephora HOM05D000203 ORTHO05D000135 9.7e-08 60.8 171 29.2
Sabra10G0051300 Salix brachista HOM05D000203 ORTHO05D000135 9.7e-08 60.8 160 28.8
Migut.B00482 Erythranthe guttata HOM05D000203 ORTHO05D000135 1.7e-07 60.1 169 34.3
Potri.017G040700 Populus trichocarpa HOM05D000203 ORTHO05D000135 1.7e-07 60.1 159 28.3
Dinv05939 Davidia involucrata HOM05D000203 ORTHO05D000135 3.7e-07 58.9 156 33.3
Cfa004715 Carpinus fangiana HOM05D000203 ORTHO05D000135 6.3e-07 58.2 171 26.9
vmacro22262 Vaccinium macrocarpon HOM05D000203 ORTHO05D000135 1.4e-06 57.0 176 29.0
Migut.N01120 Erythranthe guttata HOM05D000203 ORTHO05D000135 1.8e-06 56.6 115 32.2
Hma1.2p1_1175F.1_g264090 Hydrangea macrophylla HOM05D000203 ORTHO05D000135 3.1e-06 55.8 176 27.3
SGA_v2.0_scaffold337G49184 Striga asiatica HOM05D000203 ORTHO05D000135 4.1e-06 55.5 111 31.5
Haze_10326 Corylus avellana HOM05D000203 ORTHO05D000135 5.3e-06 55.1 109 29.4
Manes.13G057000 Manihot esculenta HOM05D000203 ORTHO05D000135 9.1e-06 54.3 162 25.3


User provided reference genes

Program Settings