Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 1.4e-251 872.5 433 100.0
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 1.1e-179 633.6 358 87.2
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 1.6e-178 629.8 358 86.0
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 1.6e-175 619.8 358 85.5
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 7.3e-160 567.8 358 79.6
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 7.3e-136 488.0 368 66.0
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 5.8e-133 478.4 360 65.3
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 1.9e-131 473.4 352 65.6
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 3.2e-131 472.6 349 67.3
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 5.4e-131 471.9 359 63.8
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 9.3e-131 471.1 351 65.5
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 1.6e-130 470.3 359 65.7
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 6.0e-130 468.4 354 66.4
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 3.0e-129 466.1 358 65.1
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 6.6e-129 464.9 348 65.5
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 1.3e-127 460.7 358 63.4
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 2.8e-127 459.5 350 64.3
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 4.8e-127 458.8 350 64.0
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 2.4e-126 456.4 350 64.3
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 5.3e-126 455.3 352 63.4
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 6.9e-126 454.9 357 63.0
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 2.6e-125 453.0 350 64.0
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.9e-124 449.5 356 63.5
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 1.4e-123 447.2 350 63.1
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 1.4e-123 447.2 411 57.7
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 1.6e-122 443.7 367 60.8
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 2.1e-122 443.4 383 59.8
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 2.7e-122 443.0 365 61.4
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 4.6e-122 442.2 360 59.2
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 7.9e-122 441.4 350 62.0
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 2.3e-121 439.9 350 62.6
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 5.1e-121 438.7 359 59.3
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 5.1e-121 438.7 357 61.6
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 1.9e-120 436.8 365 60.5
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 3.3e-120 436.0 355 62.3
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 7.4e-120 434.9 348 62.9
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 1.3e-119 434.1 364 60.2
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 1.3e-119 434.1 360 59.7
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 2.8e-119 433.0 360 59.7
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 1.2e-117 427.6 345 60.6
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 2.0e-117 426.8 336 61.6
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.0e-117 426.8 360 58.6
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 2.6e-117 426.4 339 64.3
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 7.6e-117 424.9 339 61.9
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 7.6e-117 424.9 336 61.9
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 1.0e-116 424.5 357 59.9
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 1.7e-116 423.7 346 61.0
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 1.7e-116 423.7 345 61.2
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 1.7e-116 423.7 343 61.5
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 2.2e-116 423.3 346 60.4
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 2.9e-116 422.9 346 61.0
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 4.9e-116 422.2 347 60.8
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 6.5e-116 421.8 296 68.2
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 8.4e-116 421.4 337 61.7
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 2.5e-115 419.9 360 58.3
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 3.2e-115 419.5 357 59.9
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 7.1e-115 418.3 344 59.6
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 9.3e-115 417.9 345 61.2
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.6e-114 417.2 363 59.0
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.6e-114 417.2 357 59.4
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 2.1e-114 416.8 350 60.6
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 2.1e-114 416.8 367 59.7
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 3.5e-114 416.0 348 60.3
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 4.6e-114 415.6 348 59.8
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 4.6e-114 415.6 346 60.4
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 2.3e-113 413.3 345 60.0
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 1.1e-112 411.0 348 59.8
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.9e-112 410.2 345 60.0
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 5.7e-112 408.7 356 58.4
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 5.7e-112 408.7 345 57.7
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 3.7e-111 406.0 353 59.2
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 3.7e-111 406.0 345 58.8
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 6.2e-111 405.2 352 58.2
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 1.1e-110 404.4 410 52.2
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.4e-110 403.3 294 68.4
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 3.1e-110 402.9 352 59.1
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 9.0e-110 401.4 345 58.8
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 2.2e-108 396.7 352 56.0
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 8.4e-108 394.8 347 58.2
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 8.7e-105 384.8 341 58.4
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 1.5e-104 384.0 343 58.0
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 1.3e-103 380.9 352 55.4
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 4.8e-103 379.0 356 55.3
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 1.8e-102 377.1 362 56.9
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 1.2e-101 374.4 342 56.1
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 1.6e-98 364.0 538 42.2
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 3.6e-98 362.8 356 53.4
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 1.8e-97 360.5 323 57.9
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 6.3e-95 352.1 348 54.0
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 2.4e-94 350.1 215 82.8
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 5.0e-92 342.4 592 38.9
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 1.4e-91 340.9 343 51.3
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 1.8e-89 334.0 347 50.7
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 1.1e-88 331.3 347 50.4
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 2.8e-87 326.6 282 58.2
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.8e-86 323.9 289 57.8
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 7.7e-85 318.5 336 48.8
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 8.5e-84 315.1 352 48.9
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 9.4e-83 311.6 360 46.7
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 2.3e-81 307.0 353 47.3
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 5.2e-81 305.8 312 54.8
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 8.8e-81 305.1 343 46.9
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 1.1e-78 298.1 227 65.2
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 1.8e-78 297.4 296 54.1
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 1.0e-76 291.6 215 68.8
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 1.4e-73 281.2 307 48.9
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 2.4e-70 270.4 203 65.0
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 9.1e-70 268.5 154 87.0
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 1.2e-66 258.1 280 52.5
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 1.5e-64 251.1 344 43.9
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.7e-63 247.7 349 45.0
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 1.7e-63 247.7 386 38.9
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 4.1e-62 243.0 200 62.5
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 2.3e-60 237.3 126 88.9
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 1.6e-58 231.1 214 56.1
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 2.0e-56 224.2 198 59.6
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 1.8e-54 217.6 335 38.8
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 5.0e-52 209.5 270 44.8
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 1.9e-51 207.6 242 50.4
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.6e-50 204.5 195 52.8
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 1.8e-49 201.1 216 47.2
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 1.1e-46 191.8 308 37.3
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 2.1e-42 177.6 112 67.9
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 1.8e-41 174.5 357 32.8
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 7.5e-40 169.1 226 44.2
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 2.1e-37 161.0 126 61.9
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 9.5e-35 152.1 138 57.2
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 6.2e-34 149.4 157 51.6
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 4.0e-33 146.7 128 54.7
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 5.1e-28 129.8 90 62.2
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 9.9e-24 115.5 267 30.7
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.7e-23 114.8 86 66.3
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.8e-23 113.6 124 52.4
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 5.1e-20 103.2 90 58.9
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 2.5e-19 100.9 80 57.5
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 4.0e-17 93.6 90 56.7
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.7e-15 88.2 80 58.8
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 2.2e-15 87.8 99 48.5


User provided reference genes

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