Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 2.3e-279 964.9 495 100.0
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 1.2e-254 882.9 519 89.4
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 5.0e-205 718.0 495 75.4
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 2.5e-204 715.7 495 75.4
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 9.7e-193 677.2 493 71.8
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 4.2e-180 635.2 496 70.4
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 1.6e-174 616.7 498 66.9
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 1.5e-164 583.6 498 66.5
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 3.4e-145 519.2 503 55.1
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 7.1e-143 511.5 500 54.0
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 2.7e-142 509.6 499 55.7
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 3.6e-139 499.2 490 53.7
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 4.7e-139 498.8 491 53.6
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 9.3e-135 484.6 358 70.7
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 2.5e-132 476.5 502 49.8
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 5.6e-132 475.3 496 52.2
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 2.8e-131 473.0 498 54.0
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 4.0e-130 469.2 499 49.9
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 1.5e-129 467.2 497 50.7
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 2.0e-129 466.8 495 52.1
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 3.4e-129 466.1 507 52.7
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 7.6e-129 464.9 498 51.8
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 1.1e-127 461.1 497 50.5
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 1.1e-127 461.1 494 51.6
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 1.4e-127 460.7 495 51.3
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 2.4e-127 459.9 489 50.3
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 5.4e-127 458.8 527 50.5
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 1.2e-126 457.6 495 51.9
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 6.0e-126 455.3 501 50.1
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 7.9e-126 454.9 497 50.3
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 7.9e-126 454.9 438 54.6
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 2.3e-125 453.4 499 51.1
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 3.0e-125 453.0 500 49.2
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 4.3e-124 449.1 500 49.8
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 9.6e-124 448.0 454 53.3
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 1.3e-123 447.6 508 49.6
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 1.6e-123 447.2 506 50.8
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 1.1e-122 444.5 496 50.2
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 3.1e-122 443.0 501 49.3
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 3.1e-122 443.0 494 49.4
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.2e-121 441.0 446 53.4
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 2.6e-121 439.9 501 50.3
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 2.6e-121 439.9 512 49.4
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 4.5e-121 439.1 465 49.5
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 7.6e-121 438.3 495 49.7
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 9.9e-121 438.0 499 49.3
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 1.3e-120 437.6 504 50.2
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 2.2e-120 436.8 510 49.8
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 3.8e-120 436.0 508 49.4
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 8.4e-120 434.9 497 49.5
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 8.4e-120 434.9 469 52.5
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 8.4e-120 434.9 499 47.9
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 5.5e-119 432.2 481 50.1
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 7.1e-119 431.8 501 49.5
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 7.1e-119 431.8 496 49.8
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 9.3e-119 431.4 498 47.8
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 2.1e-118 430.3 509 48.7
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 4.6e-118 429.1 500 49.6
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 1.1e-116 424.5 495 49.1
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 1.1e-116 424.5 467 51.0
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 2.5e-116 423.3 500 49.4
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 3.7e-115 419.5 490 48.8
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 2.4e-114 416.8 485 47.6
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 3.1e-114 416.4 506 47.8
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 2.0e-113 413.7 396 56.6
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 1.3e-112 411.0 503 46.1
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 1.3e-112 411.0 489 48.1
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 2.2e-112 410.2 403 52.4
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 6.5e-112 408.7 499 47.9
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 9.3e-111 404.8 506 45.1
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 1.0e-109 401.4 527 44.4
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 1.8e-109 400.6 493 47.3
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 5.1e-109 399.1 466 48.5
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 1.2e-105 387.9 574 42.3
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 3.4e-105 386.3 494 44.9
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 7.6e-105 385.2 428 50.9
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 1.2e-102 377.9 491 46.0
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 6.1e-102 375.6 497 44.3
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 6.1e-102 375.6 357 54.9
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 7.9e-102 375.2 497 44.9
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 2.3e-101 373.6 425 48.7
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 3.9e-101 372.9 494 43.9
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 6.7e-101 372.1 496 45.4
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 5.7e-100 369.0 494 44.1
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 1.7e-99 367.5 500 43.6
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 1.4e-98 364.4 441 47.6
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 5.3e-98 362.5 497 43.3
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 5.3e-98 362.5 497 42.7
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 3.8e-96 356.3 494 43.5
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 3.2e-95 353.2 494 43.1
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 9.4e-95 351.7 495 43.2
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 9.4e-95 351.7 495 43.4
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 9.4e-95 351.7 495 43.2
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 3.9e-93 346.3 343 51.3
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 1.7e-91 340.9 506 40.5
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 2.2e-91 340.5 495 43.8
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 2.8e-91 340.1 554 41.7
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 4.8e-91 339.3 361 50.1
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 4.8e-91 339.3 506 40.3
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 3.5e-81 306.6 487 37.8
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 7.7e-81 305.4 393 45.8
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 3.8e-80 303.1 396 44.7
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 2.1e-78 297.4 352 49.1
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 2.4e-74 283.9 491 37.7
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 3.4e-68 263.5 252 56.3
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 2.7e-57 227.3 502 32.7
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 1.0e-56 225.3 428 34.1
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 1.4e-53 214.9 347 40.6
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 5.2e-53 213.0 274 43.4
AUR62035705 Chenopodium quinoa HOM05D005719 ORTHO05D007030 2.4e-50 204.1 280 43.2
TAR381G0292 Trochodendron aralioides HOM05D005719 ORTHO05D007030 9.2e-50 202.2 235 48.9
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.2e-49 201.8 188 56.4
Peaxi162Scf01397g00010 Petunia axillaris HOM05D005719 ORTHO05D007030 3.9e-48 196.8 138 74.6
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 8.3e-43 179.1 168 54.8
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 1.9e-42 177.9 276 39.1
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 1.6e-41 174.9 439 31.2
Oeu035375.1 Olea europaea HOM05D005719 ORTHO05D007030 8.3e-35 152.5 172 49.4
ATR0144G003 Amborella trichopoda HOM05D005719 ORTHO05D007030 1.7e-32 144.8 240 40.0
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 1.7e-32 144.8 346 32.4
BcaB04g19478 Brassica carinata HOM05D005719 ORTHO05D007030 4.0e-29 133.7 278 33.5
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 9.2e-26 122.5 135 49.6
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 5.1e-24 116.7 386 27.5
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 4.3e-23 113.6 100 55.0
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 1.6e-22 111.7 107 57.0
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 3.6e-22 110.5 137 44.5
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 3.4e-20 104.0 122 49.2
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 4.4e-20 103.6 164 38.4
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 7.3e-15 86.3 193 32.6
SEGI_23985 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 6.9e-13 79.7 126 37.3
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 7.6e-12 76.3 119 39.5
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 2.2e-11 74.7 107 43.9
C05p32060 Brassica napus HOM05D005719 ORTHO05D007030 1.9e-07 61.6 86 43.0
BolC5t31933H Brassica oleracea HOM05D005719 ORTHO05D007030 1.9e-07 61.6 86 43.0


User provided reference genes

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