Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 7.6e-36 153.3 77 100.0
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 1.1e-26 122.9 77 81.8
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 7.9e-25 116.7 77 75.3
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 7.9e-25 116.7 77 75.3
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 1.0e-24 116.3 77 75.3
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 7.4e-23 110.2 78 73.1
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 2.1e-22 108.6 78 70.5
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 2.8e-22 108.2 81 70.4
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 1.3e-16 89.4 55 78.2
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 1.5e-15 85.9 54 77.8
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 1.9e-15 85.5 62 67.7
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 3.3e-15 84.7 71 62.0
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 3.3e-15 84.7 81 61.7
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 4.3e-15 84.3 56 73.2
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 5.7e-15 84.0 69 66.7
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 5.7e-15 84.0 69 60.9
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 9.7e-15 83.2 58 67.2
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 2.8e-14 81.6 64 70.3
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 2.8e-14 81.6 78 60.3
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 3.7e-14 81.3 58 72.4
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 3.7e-14 81.3 71 60.6
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 3.7e-14 81.3 71 60.6
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 4.8e-14 80.9 71 60.6
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 4.8e-14 80.9 69 63.8
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 4.8e-14 80.9 77 59.7
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 4.8e-14 80.9 62 67.7
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 4.8e-14 80.9 69 58.0
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 8.2e-14 80.1 66 68.2
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 8.2e-14 80.1 69 60.9
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 1.1e-13 79.7 68 58.8
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 1.4e-13 79.3 71 63.4
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 1.4e-13 79.3 53 71.7
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 1.8e-13 79.0 66 66.7
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 1.8e-13 79.0 64 60.9
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 1.8e-13 79.0 64 60.9
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 2.4e-13 78.6 63 61.9
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 2.4e-13 78.6 63 61.9
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 2.4e-13 78.6 83 57.8
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 3.1e-13 78.2 53 71.7
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 3.1e-13 78.2 70 62.9
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 3.1e-13 78.2 72 56.9
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 4.1e-13 77.8 54 70.4
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 4.1e-13 77.8 62 66.1
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 5.3e-13 77.4 69 56.5
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 5.3e-13 77.4 68 60.3
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 6.9e-13 77.0 64 59.4
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 6.9e-13 77.0 71 56.3
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 9.1e-13 76.6 53 66.0
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 9.1e-13 76.6 54 68.5
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 1.2e-12 76.3 54 70.4
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 1.5e-12 75.9 57 70.2
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 2.0e-12 75.5 54 66.7
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 2.0e-12 75.5 59 66.1
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 2.0e-12 75.5 54 70.4
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 2.6e-12 75.1 71 59.2
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 2.6e-12 75.1 67 58.2
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 2.6e-12 75.1 76 50.0
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 3.4e-12 74.7 62 56.5
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 3.4e-12 74.7 54 66.7
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 3.4e-12 74.7 56 62.5
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 4.5e-12 74.3 72 55.6
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 4.5e-12 74.3 72 55.6
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 4.5e-12 74.3 59 59.3
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 4.5e-12 74.3 59 64.4
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 5.9e-12 73.9 61 63.9
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 5.9e-12 73.9 73 53.4
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 1.0e-11 73.2 57 64.9
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 1.0e-11 73.2 77 57.1
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 1.3e-11 72.8 65 60.0
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 2.2e-11 72.0 64 59.4
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 3.8e-11 71.2 74 52.7
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 3.8e-11 71.2 55 65.5
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 5.0e-11 70.9 56 62.5
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 6.5e-11 70.5 73 47.9
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 6.5e-11 70.5 69 53.6
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 6.5e-11 70.5 57 63.2
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 8.5e-11 70.1 53 66.0
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 8.5e-11 70.1 65 55.4
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 1.4e-10 69.3 71 50.7
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 1.4e-10 69.3 50 64.0
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 1.9e-10 68.9 53 62.3
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 2.5e-10 68.6 54 64.8
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 3.2e-10 68.2 53 64.2
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 5.5e-10 67.4 61 54.1
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 5.5e-10 67.4 59 57.6
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 2.1e-09 65.5 41 75.6
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 2.7e-09 65.1 58 60.3
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 2.7e-09 65.1 62 54.8
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 6.1e-09 63.9 51 62.7
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 6.1e-09 63.9 80 46.2
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 7.9e-09 63.5 63 55.6
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 1.0e-08 63.2 69 49.3
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 1.0e-08 63.2 56 57.1
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 1.5e-07 59.3 75 46.7
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 5.7e-07 57.4 47 59.6
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 3.7e-06 54.7 71 42.3


User provided reference genes

Program Settings