Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 0.0e+00 1778.1 889 100.0
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 0.0e+00 1559.3 865 90.6
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 0.0e+00 1553.1 865 90.3
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1534.2 863 89.3
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1519.2 865 88.6
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 0.0e+00 1291.9 865 78.5
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 0.0e+00 1217.2 887 70.2
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1209.1 865 71.0
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 0.0e+00 1187.2 864 69.8
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 0.0e+00 1183.3 965 64.4
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1174.5 863 67.9
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 0.0e+00 1173.7 873 68.2
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 0.0e+00 1172.5 871 66.1
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 0.0e+00 1170.2 853 69.2
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 0.0e+00 1168.7 883 65.7
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 0.0e+00 1167.5 850 67.9
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 0.0e+00 1166.4 868 67.3
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 0.0e+00 1165.6 870 66.2
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 0.0e+00 1161.7 875 67.4
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 0.0e+00 1161.0 877 66.0
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 0.0e+00 1160.6 879 65.8
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 0.0e+00 1158.7 881 67.5
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 0.0e+00 1157.5 813 69.2
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 0.0e+00 1156.0 867 69.0
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 0.0e+00 1149.4 873 67.4
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 0.0e+00 1144.8 884 65.6
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 0.0e+00 1140.2 829 68.9
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1137.5 816 66.3
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 0.0e+00 1135.9 816 66.2
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 0.0e+00 1134.8 839 68.3
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 0.0e+00 1132.9 877 66.1
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1132.5 816 66.2
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 0.0e+00 1130.9 884 67.0
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 0.0e+00 1128.6 868 64.2
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 0.0e+00 1122.8 817 67.7
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 0.0e+00 1119.4 837 66.2
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1117.1 869 63.9
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 0.0e+00 1116.7 868 64.6
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 0.0e+00 1113.6 761 72.5
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1112.4 836 64.2
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 0.0e+00 1111.7 923 61.4
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 0.0e+00 1109.4 888 62.8
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1104.7 870 62.3
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 0.0e+00 1101.7 873 65.1
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1098.6 817 66.5
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 0.0e+00 1097.4 816 65.7
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 0.0e+00 1096.6 865 62.5
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1094.7 818 67.6
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 0.0e+00 1094.3 842 65.2
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 0.0e+00 1093.6 916 61.2
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 0.0e+00 1093.6 834 65.5
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1093.6 869 63.2
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1087.4 916 59.5
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 0.0e+00 1084.3 817 63.2
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 0.0e+00 1083.2 817 66.6
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 0.0e+00 1083.2 826 63.8
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 0.0e+00 1081.6 904 62.1
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 0.0e+00 1080.1 818 64.1
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 0.0e+00 1079.7 869 63.2
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 0.0e+00 1079.3 819 64.0
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 0.0e+00 1078.9 818 63.8
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 0.0e+00 1077.8 871 62.6
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 0.0e+00 1076.6 880 62.5
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 0.0e+00 1076.2 815 65.0
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 5.5e-311 1070.8 848 62.1
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 7.8e-310 1067.0 867 61.2
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 8.7e-309 1063.5 847 62.8
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 8.7e-309 1063.5 859 61.9
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 1.5e-308 1062.8 879 61.0
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 1.5e-308 1062.8 884 60.5
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 2.5e-308 1062.0 888 60.7
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 9.6e-308 1060.1 814 64.1
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 1.1e-306 1056.6 854 61.8
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 1.8e-306 1055.8 833 64.7
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 3.1e-306 1055.0 877 60.7
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 1.2e-305 1053.1 883 59.9
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 1.2e-305 1053.1 883 59.9
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 1.2e-305 1053.1 863 61.0
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 3.4e-305 1051.6 868 61.1
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 4.9e-304 1047.7 833 64.3
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 1.6e-302 1042.7 693 73.6
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 5.6e-300 1034.2 814 62.4
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 4.5e-297 1024.6 836 62.1
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 1.1e-292 1010.0 858 59.9
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 4.8e-291 1004.6 641 76.1
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 1.1e-284 983.4 769 65.0
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 7.9e-278 960.7 737 63.8
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 1.1e-274 950.3 853 56.5
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 2.4e-274 949.1 804 57.6
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 1.6e-270 936.4 718 64.8
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 4.4e-268 928.3 785 62.0
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 1.2e-265 920.2 851 55.0
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 2.0e-265 919.5 894 56.2
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 1.5e-260 903.3 699 63.8
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 4.1e-258 895.2 684 65.4
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 6.3e-251 871.3 733 63.0
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 2.9e-240 835.9 859 49.1
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 1.1e-234 817.4 875 47.8
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 1.8e-229 800.0 855 49.0
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 2.3e-213 746.5 741 49.7
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.2e-201 707.6 770 50.3
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 4.5e-188 662.5 512 65.6
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 1.6e-185 654.1 574 52.6
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 2.5e-178 630.2 481 65.7
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 8.8e-152 542.0 807 38.8
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 4.5e-148 529.6 769 39.8
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.3e-139 501.5 601 47.8
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 2.2e-118 431.0 399 54.1
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 2.2e-110 404.4 300 65.7
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 9.5e-106 389.0 398 54.5
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 7.5e-103 379.4 299 62.9
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 2.5e-90 337.8 199 76.4
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 2.5e-90 337.8 244 65.6
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 4.3e-90 337.0 188 80.9
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 2.8e-89 334.3 186 81.2
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.9e-85 321.6 246 62.2
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 6.4e-78 296.6 217 66.4
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 1.1e-74 285.8 417 37.2
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 4.3e-66 257.3 203 57.1
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 1.1e-40 172.9 144 52.1
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 1.2e-39 169.5 147 50.3
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 2.8e-33 148.3 171 49.1
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 6.5e-30 137.1 186 40.3
Aqoxy4G00767 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 1.4e-11 76.3 88 45.5
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.4e-11 76.3 50 80.0
SEGI_37602 Sequoiadendron giganteum HOM05D005937 ORTHO05D026713 7.5e-10 70.5 184 28.8
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 2.8e-09 68.6 108 38.9


User provided reference genes

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