Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G189.58 Capsicum annuum HOM05D000233 ORTHO05D115414 6.4e-67 257.3 131 100.0
CAN.G189.59 Capsicum annuum HOM05D000233 ORTHO05D115125 1.6e-49 199.5 152 72.4
CAN.G189.53 Capsicum annuum HOM05D000233 ORTHO05D000020 8.6e-48 193.7 149 70.5
CAN.G189.55 Capsicum annuum HOM05D000233 ORTHO05D000020 5.1e-40 167.9 139 69.1
CAN.G189.57 Capsicum annuum HOM05D000233 ORTHO05D011118 5.1e-40 167.9 129 72.9
CAN.G189.52 Capsicum annuum HOM05D000233 ORTHO05D000020 4.3e-15 85.1 54 77.8
Sopen03g002330 Solanum pennellii HOM05D000233 ORTHO05D000020 1.9e-10 69.7 156 38.5
PGSC0003DMG400012828 Solanum tuberosum HOM05D000233 ORTHO05D000020 2.5e-10 69.3 168 38.7
Solyc03g006320.1 Solanum lycopersicum HOM05D000233 ORTHO05D000020 3.2e-10 68.9 158 39.9
GSVIVG01020584001 Vitis vinifera HOM05D000233 ORTHO05D000020 9.3e-10 67.4 159 40.3
Duzib170G0085 Durio zibethinus HOM05D000233 ORTHO05D000020 1.0e-08 63.9 126 42.9
Sed0027869 Sechium edule HOM05D000233 ORTHO05D000020 2.3e-08 62.8 165 38.2
Peaxi162Scf00031g00144 Petunia axillaris HOM05D000233 ORTHO05D000020 3.0e-08 62.4 167 37.7
TWI39G0756 Tripterygium wilfordii HOM05D000233 ORTHO05D000020 5.1e-08 61.6 145 39.3
Nitab4.5_0001375g0160 Nicotiana tabacum HOM05D000233 ORTHO05D000020 1.1e-07 60.5 172 35.5
Glyma.06G236400 Glycine max HOM05D000233 ORTHO05D000020 1.9e-07 59.7 130 39.2
Glyma.12G162700 Glycine max HOM05D000233 ORTHO05D000020 2.5e-07 59.3 136 37.5
Nitab4.5_0009794g0010 Nicotiana tabacum HOM05D000233 ORTHO05D000020 2.5e-07 59.3 184 35.3
Solyc10g009110.1 Solanum lycopersicum HOM05D000233 ORTHO05D000020 2.5e-07 59.3 165 36.4
Sopen10g004890 Solanum pennellii HOM05D000233 ORTHO05D000020 2.5e-07 59.3 166 36.1
Sopen10g004900 Solanum pennellii HOM05D000233 ORTHO05D000020 2.5e-07 59.3 166 36.1
Gorai.010G256600 Gossypium raimondii HOM05D000233 ORTHO05D000020 4.3e-07 58.5 170 35.9
Sabra11G0101300 Salix brachista HOM05D000233 ORTHO05D000020 4.3e-07 58.5 160 36.2
MELO3C002624.2 Cucumis melo HOM05D000233 ORTHO05D000020 5.7e-07 58.2 145 36.6
Lalb_Chr20g0109521 Lupinus albus HOM05D000233 ORTHO05D000020 7.4e-07 57.8 140 38.6
A07p11240 Brassica napus HOM05D000233 ORTHO05D000020 9.7e-07 57.4 132 37.9
A08p25650 Brassica napus HOM05D000233 ORTHO05D000020 9.7e-07 57.4 132 37.1
BraA07t28917Z Brassica rapa HOM05D000233 ORTHO05D000020 9.7e-07 57.4 132 37.9
BraA08t34515Z Brassica rapa HOM05D000233 ORTHO05D000020 9.7e-07 57.4 132 37.1
ClCG03G008040 Citrullus lanatus HOM05D000233 ORTHO05D000020 9.7e-07 57.4 139 38.8
BcaB03g13931 Brassica carinata HOM05D000233 ORTHO05D000020 1.3e-06 57.0 133 37.6
CsaV3_1G012520 Cucumis sativus L. HOM05D000233 ORTHO05D000020 1.3e-06 57.0 145 35.9
Lj8P108T38 Lonicera japonica HOM05D000233 ORTHO05D000020 1.3e-06 57.0 145 37.9
TWI38G0114 Tripterygium wilfordii HOM05D000233 ORTHO05D000020 1.3e-06 57.0 148 36.5
VMungo0540G1794 Vigna mungo HOM05D000233 ORTHO05D000020 1.3e-06 57.0 162 40.1
Aa31LG8G2410 Aethionema arabicum HOM05D000233 ORTHO05D000020 1.6e-06 56.6 153 34.0
Nitab4.5_0000516g0110 Nicotiana tabacum HOM05D000233 ORTHO05D000020 1.6e-06 56.6 172 34.9
Gohir.A06G211300 Gossypium hirsutum HOM05D000233 ORTHO05D000020 2.8e-06 55.8 170 36.5
Gohir.D06G209900 Gossypium hirsutum HOM05D000233 ORTHO05D000020 2.8e-06 55.8 170 35.3
PGSC0003DMG400022823 Solanum tuberosum HOM05D000233 ORTHO05D000020 2.8e-06 55.8 163 36.8
CiPaw.09G062700 Carya illinoinensis HOM05D000233 ORTHO05D000020 3.7e-06 55.5 170 33.5
unitig_62.g23328 Utricularia gibba HOM05D000233 ORTHO05D000020 3.7e-06 55.5 42 59.5
AL3G27600 Arabidopsis lyrata HOM05D000233 ORTHO05D000020 4.8e-06 55.1 159 34.0
BcaC06g35358 Brassica carinata HOM05D000233 ORTHO05D000020 4.8e-06 55.1 132 37.1
C07p17000 Brassica napus HOM05D000233 ORTHO05D000020 4.8e-06 55.1 132 37.1
CAN.G568.1 Capsicum annuum HOM05D000233 ORTHO05D115679 4.8e-06 55.1 144 35.4
Lsat_1_v5_gn_5_128280 Lactuca sativa HOM05D000233 ORTHO05D000020 4.8e-06 55.1 165 33.9
Sed0003131 Sechium edule HOM05D000233 ORTHO05D000020 4.8e-06 55.1 136 36.8
Medtr2g014340 Medicago truncatula HOM05D000233 ORTHO05D000020 6.3e-06 54.7 150 32.7
Nitab4.5_0003219g0010 Nicotiana tabacum HOM05D000233 ORTHO05D000020 6.3e-06 54.7 175 34.3
BcaC01g00040 Brassica carinata HOM05D000233 ORTHO05D000020 8.2e-06 54.3 132 37.1
C03p75060 Brassica napus HOM05D000233 ORTHO05D000020 8.2e-06 54.3 132 37.1
BolC3t19761H Brassica oleracea HOM05D000233 ORTHO05D000020 8.2e-06 54.3 132 37.1
BolC7t42203H Brassica oleracea HOM05D000233 ORTHO05D000020 8.2e-06 54.3 132 37.1
Oeu036076.1 Olea europaea HOM05D000233 ORTHO05D000020 8.2e-06 54.3 141 39.7
Psat0ss4650g0040 Pisum sativum HOM05D000233 ORTHO05D000020 8.2e-06 54.3 138 37.0


User provided reference genes

Program Settings