Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1887.4 Capsicum annuum HOM05D000009 ORTHO05D000008 9.8e-48 193.7 149 100.0
CAN.G1524.11 Capsicum annuum HOM05D000009 ORTHO05D000008 1.8e-25 119.8 142 82.4
CAN.G1632.1 Capsicum annuum HOM05D000009 ORTHO05D000008 2.4e-25 119.4 164 61.0
CAN.G1848.4 Capsicum annuum HOM05D000009 ORTHO05D000008 6.9e-25 117.9 167 67.7
CAN.G631.60 Capsicum annuum HOM05D000009 ORTHO05D000008 6.9e-25 117.9 164 63.4
CAN.G1887.9 Capsicum annuum HOM05D000009 ORTHO05D000008 1.2e-24 117.1 162 73.5
CAN.G546.4 Capsicum annuum HOM05D000009 ORTHO05D000008 2.0e-24 116.3 164 68.3
CAN.G631.58 Capsicum annuum HOM05D000009 ORTHO05D000008 2.0e-24 116.3 165 69.7
CAN.G309.26 Capsicum annuum HOM05D000009 ORTHO05D000008 4.4e-24 115.2 140 80.0
CAN.G1524.15 Capsicum annuum HOM05D000009 ORTHO05D000008 5.8e-24 114.8 167 61.7
CAN.G1358.6 Capsicum annuum HOM05D000009 ORTHO05D000008 4.9e-23 111.7 166 65.7
Nitab4.5_0000227g0100 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.9e-23 111.7 143 55.9
CAN.G742.11 Capsicum annuum HOM05D000009 ORTHO05D000008 1.9e-22 109.8 142 66.9
PGSC0003DMG400027407 Solanum tuberosum HOM05D000009 ORTHO05D000008 4.2e-22 108.6 165 62.4
CAN.G309.41 Capsicum annuum HOM05D000009 ORTHO05D000008 5.4e-22 108.2 186 55.9
CAN.G182.8 Capsicum annuum HOM05D000009 ORTHO05D000008 9.3e-22 107.5 133 83.5
PGSC0003DMG402030236 Solanum tuberosum HOM05D000009 ORTHO05D000008 9.3e-22 107.5 192 62.0
PGSC0003DMG402030235 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.6e-21 106.7 165 66.7
CAN.G1887.7 Capsicum annuum HOM05D000009 ORTHO05D000008 4.6e-21 105.1 64 84.4
CAN.G2377.1 Capsicum annuum HOM05D000009 ORTHO05D000008 2.3e-20 102.8 185 64.3
PGSC0003DMG400007344 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.0e-20 102.4 163 63.2
CAN.G525.34 Capsicum annuum HOM05D000009 ORTHO05D000008 5.1e-20 101.7 64 81.2
Nitab4.5_0010433g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.9e-19 99.8 188 54.8
CAN.G1632.9 Capsicum annuum HOM05D000009 ORTHO05D000008 2.5e-19 99.4 62 80.6
PGSC0003DMG400027410 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.5e-19 99.4 165 64.8
Solyc11g071390.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 3.3e-19 99.0 143 54.5
Nitab4.5_0000023g0520 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.3e-19 98.6 64 76.6
Nitab4.5_0014415g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.3e-19 98.6 170 58.8
CAN.G309.7 Capsicum annuum HOM05D000009 ORTHO05D000008 5.6e-19 98.2 165 69.7
Sopen11g029090 Solanum pennellii HOM05D000009 ORTHO05D000008 5.6e-19 98.2 141 65.2
CAN.G1149.3 Capsicum annuum HOM05D000009 ORTHO05D000008 7.3e-19 97.8 62 80.6
CAN.G309.42 Capsicum annuum HOM05D000009 ORTHO05D000008 9.6e-19 97.4 65 76.9
Nitab4.5_0001107g0110 Nicotiana tabacum HOM05D000009 ORTHO05D000008 9.6e-19 97.4 164 57.3
Nitab4.5_0011718g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 9.6e-19 97.4 182 46.7
PGSC0003DMG400027377 Solanum tuberosum HOM05D000009 ORTHO05D000008 9.6e-19 97.4 144 71.5
CAN.G1848.5 Capsicum annuum HOM05D000009 ORTHO05D000008 1.3e-18 97.1 188 59.0
CAN.G777.4 Capsicum annuum HOM05D000009 ORTHO05D000008 1.3e-18 97.1 64 75.0
CAN.G963.11 Capsicum annuum HOM05D000009 ORTHO05D000008 1.3e-18 97.1 61 83.6
PGSC0003DMG400017666 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.6e-18 96.7 152 64.5
CAN.G1358.4 Capsicum annuum HOM05D000009 ORTHO05D000008 2.1e-18 96.3 62 82.3
CAN.G1524.10 Capsicum annuum HOM05D000009 ORTHO05D000008 2.1e-18 96.3 168 53.0
PGSC0003DMG400002982 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.1e-18 96.3 146 43.2
PGSC0003DMG400018694 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.1e-18 96.3 175 65.7
CAN.G742.20 Capsicum annuum HOM05D000009 ORTHO05D000008 2.8e-18 95.9 67 73.1
Nitab4.5_0005589g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.6e-18 95.5 167 53.3
Nitab4.5_0009266g0070 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.8e-18 95.1 64 73.4
PGSC0003DMG400018572 Solanum tuberosum HOM05D000009 ORTHO05D000008 8.1e-18 94.4 143 65.0
CAN.G553.4 Capsicum annuum HOM05D000009 ORTHO05D000008 1.1e-17 94.0 167 60.5
Nitab4.5_0000023g0560 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.1e-17 94.0 62 79.0
PGSC0003DMG401018576 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.1e-17 94.0 146 62.3
Sopen11g025560 Solanum pennellii HOM05D000009 ORTHO05D000008 1.4e-17 93.6 158 54.4
CAN.G631.56 Capsicum annuum HOM05D000009 ORTHO05D000008 5.3e-17 91.7 188 60.1
Nitab4.5_0003550g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 5.3e-17 91.7 64 76.6
Nitab4.5_0000613g0070 Nicotiana tabacum HOM05D000009 ORTHO05D000008 9.0e-17 90.9 64 73.4
PGSC0003DMG400025383 Solanum tuberosum HOM05D000009 ORTHO05D000008 9.0e-17 90.9 64 75.0
Nitab4.5_0000013g0520 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.5e-16 90.1 154 51.3
PGSC0003DMG400018722 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.5e-16 90.1 145 72.4
Nitab4.5_0000890g0110 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.4e-16 89.0 190 49.5
PGSC0003DMG400002980 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.4e-16 89.0 166 66.9
PGSC0003DMG400018577 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.4e-16 89.0 145 71.7
Nitab4.5_0000227g0330 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.6e-16 87.8 63 73.0
Nitab4.5_0000075g0120 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.7e-15 86.7 62 69.4
PGSC0003DMG401030236 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.2e-15 86.3 161 64.0
Sopen11g028330 Solanum pennellii HOM05D000009 ORTHO05D000008 2.9e-15 85.9 191 57.1
Nitab4.5_0004542g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.8e-15 85.5 66 68.2
PGSC0003DMG400046550 Solanum tuberosum HOM05D000009 ORTHO05D000008 4.9e-15 85.1 164 64.0
Nitab4.5_0005589g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 8.4e-15 84.3 65 70.8
Nitab4.5_0002914g0120 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.1e-14 84.0 64 68.8
PGSC0003DMG400030240 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.4e-14 83.6 161 61.5
CAN.G631.62 Capsicum annuum HOM05D000009 ORTHO05D000008 2.4e-14 82.8 57 75.4
Peaxi162Scf00857g00010 Petunia axillaris HOM05D000009 ORTHO05D000008 7.1e-14 81.3 58 69.0
PGSC0003DMG403018696 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.2e-13 80.5 144 62.5
Sopen11g029120 Solanum pennellii HOM05D000009 ORTHO05D000008 1.6e-13 80.1 142 61.3
PGSC0003DMG400009455 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.6e-13 80.1 54 70.4
Peaxi162Scf00757g00423 Petunia axillaris HOM05D000009 ORTHO05D000008 4.6e-13 78.6 162 49.4
Peaxi162Scf00773g00123 Petunia axillaris HOM05D000009 ORTHO05D000008 6.0e-13 78.2 59 69.5
Nitab4.5_0002355g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.9e-13 77.8 57 73.7
PGSC0003DMG400018574 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.9e-13 77.8 58 70.7
Nitab4.5_0005589g0040 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.8e-12 76.6 167 50.9
Sopen11g029100 Solanum pennellii HOM05D000009 ORTHO05D000008 2.3e-12 76.3 164 63.4
Solyc11g069620.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 3.0e-12 75.9 54 72.2
PGSC0003DMG400027409 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.9e-12 75.5 167 58.7
Nitab4.5_0010845g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.7e-12 74.7 164 56.7
Nitab4.5_0006572g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 8.7e-12 74.3 64 62.5
Solyc11g071420.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 8.7e-12 74.3 134 61.2
CAN.G7073.1 Capsicum annuum HOM05D000009 ORTHO05D000008 1.5e-11 73.6 144 60.4
Peaxi162Scf01048g00001 Petunia axillaris HOM05D000009 ORTHO05D000008 1.5e-11 73.6 58 63.8
PGSC0003DMG400040620 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.9e-11 73.2 159 64.2
Sopen11g028670 Solanum pennellii HOM05D000009 ORTHO05D000008 2.5e-11 72.8 69 62.3
PGSC0003DMG400019669 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.5e-11 72.8 64 65.6
Cc04_g14760 Coffea canephora HOM05D000009 ORTHO05D000008 7.4e-11 71.2 140 32.1
PGSC0003DMG400018570 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.4e-11 71.2 58 67.2
PGSC0003DMG401014048 Solanum tuberosum HOM05D000009 ORTHO05D000008 9.6e-11 70.9 58 67.2
Cc00_g32460 Coffea canephora HOM05D000009 ORTHO05D000008 2.8e-10 69.3 140 34.3
Solyc11g068360.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 4.8e-10 68.6 58 65.5
Cc02_g29890 Coffea canephora HOM05D000009 ORTHO05D000008 6.2e-10 68.2 140 30.7
Nitab4.5_0011718g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.2e-10 68.2 64 56.2
Peaxi162Scf00637g00221 Petunia axillaris HOM05D000009 ORTHO05D000008 6.2e-10 68.2 56 60.7
Peaxi162Scf01285g00003 Petunia axillaris HOM05D000009 ORTHO05D000008 6.2e-10 68.2 56 60.7
Sopen11g027080 Solanum pennellii HOM05D000009 ORTHO05D000008 8.1e-10 67.8 58 65.5
Dinv25396 Davidia involucrata HOM05D000009 ORTHO05D000008 1.8e-09 66.6 140 34.3
PGSC0003DMG401020789 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.8e-09 66.6 46 71.7
Cc00_g29830 Coffea canephora HOM05D000009 ORTHO05D000008 2.4e-09 66.2 140 32.1
Cc02_g30020 Coffea canephora HOM05D000009 ORTHO05D000008 2.4e-09 66.2 138 30.4
Cc02_g29910 Coffea canephora HOM05D000009 ORTHO05D000008 3.1e-09 65.9 140 32.9
Cc00_g22820 Coffea canephora HOM05D000009 ORTHO05D000008 6.9e-09 64.7 140 32.9
Cc00_g34800 Coffea canephora HOM05D000009 ORTHO05D000008 9.0e-09 64.3 140 32.9
Sopen11g026990 Solanum pennellii HOM05D000009 ORTHO05D000008 9.0e-09 64.3 187 55.6
Cc02_g29370 Coffea canephora HOM05D000009 ORTHO05D000008 1.2e-08 63.9 133 31.6
Sopen11g028610 Solanum pennellii HOM05D000009 ORTHO05D000008 1.2e-08 63.9 58 62.1
Sopen11g029080 Solanum pennellii HOM05D000009 ORTHO05D000008 1.5e-08 63.5 187 57.2
Nitab4.5_0015060g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.0e-08 63.2 171 36.3
Rhsim07G0060700 Rhododendron simsii HOM05D000009 ORTHO05D000008 2.0e-08 63.2 142 32.4
Solyc11g071430.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 2.6e-08 62.8 187 55.1
Peaxi162Scf00757g00425 Petunia axillaris HOM05D000009 ORTHO05D000008 3.4e-08 62.4 50 62.0
Rhsim07G0060000 Rhododendron simsii HOM05D000009 ORTHO05D000008 5.8e-08 61.6 123 35.0
Rhsim07G0209900 Rhododendron simsii HOM05D000009 ORTHO05D000008 7.6e-08 61.2 136 33.1
Peaxi162Scf01090g00130 Petunia axillaris HOM05D000009 ORTHO05D000008 9.9e-08 60.8 64 50.0
Peaxi162Scf00637g00219 Petunia axillaris HOM05D000009 ORTHO05D000008 1.3e-07 60.5 58 55.2
Rhsim07G0209500 Rhododendron simsii HOM05D000009 ORTHO05D000008 1.7e-07 60.1 136 33.8
Sopen08g003600 Solanum pennellii HOM05D000009 ORTHO05D000008 1.7e-07 60.1 59 64.4
CAN.G742.4 Capsicum annuum HOM05D000009 ORTHO05D000008 2.2e-07 59.7 121 34.7
Cc00_g16000 Coffea canephora HOM05D000009 ORTHO05D000008 2.2e-07 59.7 140 31.4
Cc02_g29920 Coffea canephora HOM05D000009 ORTHO05D000008 2.2e-07 59.7 140 29.3
Cc04_g14730 Coffea canephora HOM05D000009 ORTHO05D000008 2.2e-07 59.7 143 29.4
vmacro11084 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 2.2e-07 59.7 136 31.6
Prupe.6G130000 Prunus persica HOM05D000009 ORTHO05D000008 4.9e-07 58.5 136 33.8
Sopen11g028360 Solanum pennellii HOM05D000009 ORTHO05D000008 4.9e-07 58.5 58 60.3
Atru.chr2.3825 Acer truncatum HOM05D000009 ORTHO05D000008 6.4e-07 58.2 135 33.3
Rhsim07G0209700 Rhododendron simsii HOM05D000009 ORTHO05D000008 6.4e-07 58.2 136 33.1
Sopen11g028600 Solanum pennellii HOM05D000009 ORTHO05D000008 6.4e-07 58.2 59 61.0
Cc00_g15890 Coffea canephora HOM05D000009 ORTHO05D000008 8.4e-07 57.8 138 29.0
Rhsim07G0060600 Rhododendron simsii HOM05D000009 ORTHO05D000008 8.4e-07 57.8 123 34.1
Atru.chr2.3808 Acer truncatum HOM05D000009 ORTHO05D000008 1.1e-06 57.4 135 33.3
Ciclev10018504m.g Citrus clementina HOM05D000009 ORTHO05D000008 1.1e-06 57.4 134 32.1
CAN.G1647.2 Capsicum annuum HOM05D000009 ORTHO05D020274 1.4e-06 57.0 122 49.2
Hma1.2p1_0227F.1_g095790 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.4e-06 57.0 136 32.4
Hma1.2p1_0651F.1_g195710 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.4e-06 57.0 140 32.9
Hma1.2p1_1604F.1_g293230 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.4e-06 57.0 136 32.4
Hma1.2p1_1761F.1_g301330 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.4e-06 57.0 136 30.9
Ciclev10023902m.g Citrus clementina HOM05D000009 ORTHO05D000008 1.9e-06 56.6 149 30.2
Ciclev10024119m.g Citrus clementina HOM05D000009 ORTHO05D000008 2.4e-06 56.2 136 32.4
Hma1.2p1_1604F.1_g293260 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 2.4e-06 56.2 136 31.6
Rhsim07G0209800 Rhododendron simsii HOM05D000009 ORTHO05D000008 2.4e-06 56.2 136 33.1
MD11G1030300 Malus domestica HOM05D000009 ORTHO05D000008 3.2e-06 55.8 134 32.1
RcHm_v2.0_Chr5g0044571 Rosa chinensis HOM05D000009 ORTHO05D000008 3.2e-06 55.8 136 32.4
Solyc11g065810.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 3.2e-06 55.8 148 54.1
Sopen11g027060 Solanum pennellii HOM05D000009 ORTHO05D000008 3.2e-06 55.8 82 48.8
Ciclev10018510m.g Citrus clementina HOM05D000009 ORTHO05D000008 4.2e-06 55.5 136 31.6
Atru.chr2.3828 Acer truncatum HOM05D000009 ORTHO05D000008 5.5e-06 55.1 135 32.6
MD11G1078300 Malus domestica HOM05D000009 ORTHO05D000008 5.5e-06 55.1 139 30.9
CAN.G1149.4 Capsicum annuum HOM05D000009 ORTHO05D000008 7.1e-06 54.7 36 80.6
Duzib114G0890 Durio zibethinus HOM05D000009 ORTHO05D000008 7.1e-06 54.7 141 31.2
Sopen11g029660 Solanum pennellii HOM05D000009 ORTHO05D000008 7.1e-06 54.7 44 65.9
Actinidia06266 Actinidia chinensis HOM05D000009 ORTHO05D000008 9.3e-06 54.3 136 30.9


User provided reference genes

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