Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G187.2 Capsicum annuum HOM05D006583 ORTHO05D008134 1.2e-77 293.1 144 100.0
CAN.G851.29 Capsicum annuum HOM05D006583 ORTHO05D008134 3.1e-30 135.6 74 90.5
PGSC0003DMG401003705 Solanum tuberosum HOM05D006583 ORTHO05D008134 2.6e-29 132.5 74 87.8
Solyc04g080900.3 Solanum lycopersicum HOM05D001685 ORTHO05D009095 9.9e-29 130.6 74 85.1
Sopen04g034500 Solanum pennellii HOM05D006583 ORTHO05D008134 9.9e-29 130.6 74 85.1
Dinv31797 Davidia involucrata HOM05D006583 ORTHO05D008134 3.5e-26 122.1 74 78.4
Actinidia15372 Actinidia chinensis HOM05D006583 ORTHO05D008134 1.0e-25 120.6 74 78.4
CSS0045478 Camellia sinensis var. sinensis HOM05D006583 ORTHO05D008134 1.3e-25 120.2 74 77.0
GSVIVG01009797001 Vitis vinifera HOM05D006583 ORTHO05D008134 1.3e-25 120.2 74 78.4
Dinv39470 Davidia involucrata HOM05D006583 ORTHO05D008134 2.3e-25 119.4 74 77.0
Ciclev10002444m.g Citrus clementina HOM05D006583 ORTHO05D008134 3.9e-25 118.6 74 78.4
RcHm_v2.0_Chr6g0301961 Rosa chinensis HOM05D006583 ORTHO05D008134 6.6e-25 117.9 74 77.0
TAR068G0005 Trochodendron aralioides HOM05D000284 ORTHO05D008134 1.1e-24 117.1 74 77.0
vmacro21691 Vaccinium macrocarpon HOM05D006583 ORTHO05D008134 1.5e-24 116.7 74 74.3
Gohir.A01G113700 Gossypium hirsutum HOM05D006583 ORTHO05D008134 2.5e-24 115.9 74 77.0
Gohir.D01G101500 Gossypium hirsutum HOM05D006583 ORTHO05D008134 2.5e-24 115.9 74 77.0
Gorai.002G126000 Gossypium raimondii HOM05D006583 ORTHO05D008134 2.5e-24 115.9 74 77.0
Prupe.1G372300 Prunus persica HOM05D006583 ORTHO05D008134 2.5e-24 115.9 74 74.3
Hma1.2p1_0469F.1_g158810 Hydrangea macrophylla HOM05D006583 ORTHO05D008134 4.3e-24 115.2 74 77.0
Lj4A32T64 Lonicera japonica HOM05D006583 ORTHO05D008134 4.3e-24 115.2 74 77.0
PSO675G6535 Papaver somniferum HOM05D006583 ORTHO05D008134 4.3e-24 115.2 74 74.3
Rhsim06G0027600 Rhododendron simsii HOM05D006583 ORTHO05D008134 4.3e-24 115.2 74 73.0
TAR376G0698 Trochodendron aralioides HOM05D006583 ORTHO05D008134 5.6e-24 114.8 74 74.3
TWI56G0908 Tripterygium wilfordii HOM05D006583 ORTHO05D008134 7.3e-24 114.4 114 56.1
FvH4_2g38860 Fragaria vesca HOM05D006583 ORTHO05D008134 9.6e-24 114.0 74 75.7
FAN15G3353 Fragaria x ananassa HOM05D006583 ORTHO05D008134 9.6e-24 114.0 74 75.7
FAN27G2561 Fragaria x ananassa HOM05D001685 ORTHO05D009095 9.6e-24 114.0 74 75.7
Aqoxy5G01518 Aquilegia oxysepala HOM05D006583 ORTHO05D008134 1.6e-23 113.2 74 74.3
Duzib093G0899 Durio zibethinus HOM05D006583 ORTHO05D008134 1.6e-23 113.2 74 74.3
PGR031G1646 Punica granatum HOM05D006583 ORTHO05D008134 1.6e-23 113.2 74 75.7
Thecc.08G035300 Theobroma cacao HOM05D006583 ORTHO05D008134 1.6e-23 113.2 74 75.7
Cc10_g02290 Coffea canephora HOM05D006583 ORTHO05D008134 2.1e-23 112.8 74 74.3
Manes.18G019300 Manihot esculenta HOM05D006583 ORTHO05D008134 2.8e-23 112.5 74 73.0
PSO541G0494 Papaver somniferum HOM05D006583 ORTHO05D008134 2.8e-23 112.5 74 71.6
Atru.chr13.382 Acer truncatum HOM05D001685 ORTHO05D009095 3.6e-23 112.1 74 74.3
CsaV3_3G045530 Cucumis sativus L. HOM05D006583 ORTHO05D008134 3.6e-23 112.1 74 74.3
DCAR_009954 Daucus carota HOM05D006583 ORTHO05D008134 3.6e-23 112.1 74 73.0
FAN20G0107 Fragaria x ananassa HOM05D006583 ORTHO05D008134 3.6e-23 112.1 74 74.3
MBI04_g18961_MAGBIO Magnolia biondii HOM05D006583 ORTHO05D008134 3.6e-23 112.1 74 73.0
Phvul.009G013100 Phaseolus vulgaris HOM05D006583 ORTHO05D008134 4.7e-23 111.7 74 73.0
VMungo1309G1713 Vigna mungo HOM05D006583 ORTHO05D008134 4.7e-23 111.7 74 73.0
EL10Ac1g00579 Beta vulgaris HOM05D006583 ORTHO05D008134 8.1e-23 110.9 74 74.3
Duzib041G0648 Durio zibethinus HOM05D006583 ORTHO05D008134 8.1e-23 110.9 74 74.3
Sc02g0005320 Simmondsia chinensis HOM05D006583 ORTHO05D008134 8.1e-23 110.9 74 73.0
ClCG05G018650 Citrullus lanatus HOM05D001685 ORTHO05D009095 1.8e-22 109.8 77 71.4
Glyma.04G028200 Glycine max HOM05D006583 ORTHO05D008134 1.8e-22 109.8 74 71.6
Glyma.06G028400 Glycine max HOM05D006583 ORTHO05D008134 1.8e-22 109.8 74 71.6
MD08G1023000 Malus domestica HOM05D006583 ORTHO05D008134 1.8e-22 109.8 74 71.6
CDE06G0069 Ceratophyllum demersum HOM05D006583 ORTHO05D008134 4.0e-22 108.6 74 70.3
Sed0026661 Sechium edule HOM05D004346 ORTHO05D009095 4.0e-22 108.6 74 71.6
arahy.Tifrunner.gnm1.ann1.F32EHA Arachis hypogaea HOM05D006583 ORTHO05D008134 5.2e-22 108.2 74 67.6
arahy.Tifrunner.gnm1.ann1.IRD816 Arachis hypogaea HOM05D006583 ORTHO05D008134 5.2e-22 108.2 74 67.6
CARHR005580 Cardamine hirsuta HOM05D006583 ORTHO05D008134 6.9e-22 107.8 74 71.6
Thhalv10008762m.g Eutrema salsugineum HOM05D006583 ORTHO05D008134 6.9e-22 107.8 74 71.6
TWI36G1724 Tripterygium wilfordii HOM05D006583 ORTHO05D008134 6.9e-22 107.8 74 70.3
Ah.02g110970 Amaranthus hybridus HOM05D006583 ORTHO05D008134 9.0e-22 107.5 74 70.3
Ca_13385_v3 Cicer arietinum L. HOM05D006583 ORTHO05D008134 9.0e-22 107.5 74 71.6
CANSAT25G2309 Cannabis sativa HOM05D006583 ORTHO05D008134 1.2e-21 107.1 74 73.0
Peaxi162Scf00189g00133 Petunia axillaris HOM05D001685 ORTHO05D009095 1.2e-21 107.1 74 68.9
Potri.002G029700 Populus trichocarpa HOM05D006583 ORTHO05D008134 1.5e-21 106.7 75 69.3
Sp1g04870 Schrenkiella parvula HOM05D006583 ORTHO05D008134 1.5e-21 106.7 74 71.6
Aa31LG1G8200 Aethionema arabicum HOM05D006583 ORTHO05D008134 3.4e-21 105.5 74 70.3
Lalb_Chr11g0062151 Lupinus albus HOM05D006583 ORTHO05D008134 3.4e-21 105.5 74 66.2
MD15G1020700 Malus domestica HOM05D006583 ORTHO05D008134 3.4e-21 105.5 74 68.9
Sabra02G0023600 Salix brachista HOM05D001685 ORTHO05D008134 4.4e-21 105.1 75 69.3
MSTRG.1241 Avicennia marina HOM05D006583 ORTHO05D008134 5.8e-21 104.8 74 67.6
MELO3C003787.2 Cucumis melo HOM05D006583 ORTHO05D008134 5.8e-21 104.8 74 70.3
CiPaw.07G155600 Carya illinoinensis HOM05D006583 ORTHO05D008134 7.6e-21 104.4 74 68.9
Potri.005G233000 Populus trichocarpa HOM05D006583 ORTHO05D008134 7.6e-21 104.4 75 69.3
AL1G16010 Arabidopsis lyrata HOM05D006583 ORTHO05D008134 1.3e-20 103.6 74 70.3
Eucgr.F01851 Eucalyptus grandis HOM05D006583 ORTHO05D008134 1.3e-20 103.6 74 68.9
Psat6g006360 Pisum sativum HOM05D006583 ORTHO05D008134 1.3e-20 103.6 74 68.9
TPR.G13692 Trifolium pratense HOM05D006583 ORTHO05D008134 1.3e-20 103.6 74 68.9
Hund26881 Selenicereus undatus HOM05D006583 ORTHO05D008134 1.7e-20 103.2 74 68.9
Lalb_Chr23g0266401 Lupinus albus HOM05D006583 ORTHO05D008134 2.2e-20 102.8 74 64.9
HPP92_015882 Vanilla planifolia HOM05D006583 ORTHO05D008134 2.2e-20 102.8 74 66.2
Lj5g0011733 Lotus japonicus HOM05D006583 ORTHO05D008134 6.4e-20 101.3 74 68.9
Nitab4.5_0002156g0120 Nicotiana tabacum HOM05D006583 ORTHO05D008134 1.1e-19 100.5 61 78.7
COL.COLO4_26225 Corchorus olitorius HOM05D006583 ORTHO05D008134 1.4e-19 100.1 74 67.6
SalBow7G0241 Salvia bowleyana HOM05D006583 ORTHO05D008134 1.4e-19 100.1 78 65.4
SEGI_23693 Sequoiadendron giganteum HOM05D006583 ORTHO05D008134 1.4e-19 100.1 74 64.9
SEGI_39793 Sequoiadendron giganteum HOM05D006583 ORTHO05D008134 1.4e-19 100.1 74 64.9
HanXRQChr05g0149481 Helianthus annuus HOM05D006583 ORTHO05D008134 1.9e-19 99.8 74 68.9
Nitab4.5_0001840g0010 Nicotiana tabacum HOM05D006583 ORTHO05D008134 2.4e-19 99.4 57 84.2
Os01g0775600 Oryza sativa ssp. japonica HOM05D006583 ORTHO05D008134 2.4e-19 99.4 74 64.9
Sabra05G0179700 Salix brachista HOM05D006583 ORTHO05D008134 2.4e-19 99.4 68 72.1
BcaB03g13442 Brassica carinata HOM05D006583 ORTHO05D008134 3.2e-19 99.0 74 66.2
CDE07G0605 Ceratophyllum demersum HOM05D006583 ORTHO05D008134 3.2e-19 99.0 63 74.6
ATR0665G303 Amborella trichopoda HOM05D006583 ORTHO05D008134 4.2e-19 98.6 74 63.5
Migut.C00777 Erythranthe guttata HOM05D001685 ORTHO05D009095 4.2e-19 98.6 74 64.9
THA.LOC104798636 Tarenaya hassleriana HOM05D006583 ORTHO05D008134 4.2e-19 98.6 74 63.5
Glyma.17G254300 Glycine max HOM05D006583 ORTHO05D008134 7.1e-19 97.8 78 65.4
AT1G06060 Arabidopsis thaliana HOM05D006583 ORTHO05D008134 1.2e-18 97.1 74 64.9
AUR62034544 Chenopodium quinoa HOM05D006583 ORTHO05D008134 1.2e-18 97.1 76 63.2
QL02p010374 Quercus lobata HOM05D006583 ORTHO05D008134 1.6e-18 96.7 74 64.9
QL02p010412 Quercus lobata HOM05D006583 ORTHO05D008134 1.6e-18 96.7 74 64.9
AUR62014454 Chenopodium quinoa HOM05D006583 ORTHO05D008134 2.1e-18 96.3 76 61.8
C08p02370 Brassica napus HOM05D006583 ORTHO05D008134 3.5e-18 95.5 74 66.2
BolC8t47029H Brassica oleracea HOM05D006583 ORTHO05D008134 3.5e-18 95.5 74 66.2
BraA08t35521Z Brassica rapa HOM05D006583 ORTHO05D008134 4.6e-18 95.1 74 66.2
Haze_22568 Corylus avellana HOM05D006583 ORTHO05D008134 6.0e-18 94.7 74 62.2
HanXRQChr03g0069701 Helianthus annuus HOM05D006583 ORTHO05D008134 7.8e-18 94.4 74 64.9
Glyma.14G070300 Glycine max HOM05D006583 ORTHO05D008134 1.0e-17 94.0 75 65.3
Medtr1g019870 Medicago truncatula HOM05D006583 ORTHO05D008134 1.0e-17 94.0 74 62.2
A08p36140 Brassica napus HOM05D006583 ORTHO05D008134 3.0e-17 92.4 74 64.9
unitig_85.g27214 Utricularia gibba HOM05D006583 ORTHO05D008134 3.9e-17 92.0 75 60.0
Carub.0001s0539 Capsella rubella HOM05D006583 ORTHO05D008134 6.6e-17 91.3 74 62.2
ECA246G3248 Erigeron canadensis HOM05D006583 ORTHO05D008134 8.7e-17 90.9 74 59.5
SGA_v2.0_scaffold201G41378 Striga asiatica HOM05D006583 ORTHO05D008134 3.3e-16 89.0 74 59.5
SGA_v2.0_scaffold11G05841 Striga asiatica HOM05D006583 ORTHO05D008134 2.1e-15 86.3 74 55.4
unitig_578.g16694 Utricularia gibba HOM05D006583 ORTHO05D008134 2.8e-15 85.9 75 56.0
SGA_v2.0_scaffold11G05849 Striga asiatica HOM05D006583 ORTHO05D008134 8.1e-15 84.3 74 58.1
Mapoly0001s0037 Marchantia polymorpha HOM05D006583 ORTHO05D008134 6.9e-14 81.3 74 56.8
Pp3c9_8180 Physcomitrium patens HOM05D006583 ORTHO05D008134 2.6e-13 79.3 75 54.7
SMO118G0197 Selaginella moellendorffii HOM05D006583 ORTHO05D008134 1.3e-12 77.0 74 55.4
Pp3c15_18970 Physcomitrium patens HOM05D006583 ORTHO05D008134 6.4e-12 74.7 75 50.7
AagrBONN_evm.TU.Sc2ySwM_228.739 Anthoceros agrestis HOM05D006583 ORTHO05D008134 7.1e-11 71.2 102 42.2
Phvul.001G010600 Phaseolus vulgaris HOM05D006583 ORTHO05D008134 1.6e-10 70.1 74 47.3
Lsat_1_v5_gn_5_25641 Lactuca sativa HOM05D006583 ORTHO05D008134 1.3e-09 67.0 74 52.7
BolC5t29208H Brassica oleracea HOM05D006583 ORTHO05D008134 2.3e-09 66.2 81 46.9
Zm00001eb369980 Zea mays HOM05D006583 ORTHO05D008134 1.9e-08 63.2 49 59.2
C05p04340 Brassica napus HOM05D006583 ORTHO05D008134 3.3e-08 62.4 82 46.3


User provided reference genes

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