Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 5.1e-70 267.7 141 100.0
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 2.1e-52 209.1 117 90.6
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 3.6e-52 208.4 119 86.6
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 1.1e-51 206.8 114 91.2
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 2.4e-51 205.7 128 84.4
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 1.5e-50 203.0 114 88.6
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 4.5e-50 201.4 114 87.7
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 4.0e-43 178.3 104 86.5
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 7.6e-42 174.1 114 77.2
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 6.5e-41 171.0 125 68.8
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 5.5e-40 167.9 112 74.1
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 7.1e-40 167.5 114 74.6
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 4.6e-39 164.9 130 65.4
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 6.0e-39 164.5 112 72.3
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 1.0e-38 163.7 114 71.9
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.3e-38 163.3 114 67.5
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 2.3e-38 162.5 114 71.9
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 2.3e-38 162.5 114 68.4
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 3.9e-38 161.8 114 71.1
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 3.9e-38 161.8 114 70.2
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 3.9e-38 161.8 114 70.2
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 6.7e-38 161.0 121 70.2
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 1.1e-37 160.2 115 69.6
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 1.5e-37 159.8 114 69.3
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 1.9e-37 159.5 114 67.5
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 1.9e-37 159.5 114 66.7
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 2.5e-37 159.1 114 71.1
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 4.3e-37 158.3 116 65.5
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 4.3e-37 158.3 114 70.2
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 4.3e-37 158.3 114 70.2
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 5.7e-37 157.9 114 69.3
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 5.7e-37 157.9 114 65.8
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 5.7e-37 157.9 114 64.9
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 9.6e-37 157.1 114 71.9
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 1.3e-36 156.8 114 70.2
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 1.3e-36 156.8 120 61.7
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 1.3e-36 156.8 115 69.6
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 2.8e-36 155.6 114 66.7
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 2.8e-36 155.6 114 66.7
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 3.7e-36 155.2 114 64.0
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 3.7e-36 155.2 118 66.9
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 4.8e-36 154.8 114 66.7
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 4.8e-36 154.8 114 67.5
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 8.2e-36 154.1 118 63.6
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 8.2e-36 154.1 114 64.0
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 8.2e-36 154.1 116 68.1
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 1.4e-35 153.3 114 64.0
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 3.1e-35 152.1 114 65.8
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 4.1e-35 151.8 107 70.1
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 4.1e-35 151.8 114 68.4
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 4.1e-35 151.8 114 64.9
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 9.0e-35 150.6 114 64.9
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 1.2e-34 150.2 114 66.7
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 1.5e-34 149.8 109 67.0
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 2.0e-34 149.4 114 63.2
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 2.0e-34 149.4 114 61.4
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 3.4e-34 148.7 104 73.1
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 3.4e-34 148.7 105 68.6
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 4.5e-34 148.3 104 73.1
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 4.5e-34 148.3 105 67.6
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 5.9e-34 147.9 114 63.2
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 5.9e-34 147.9 114 64.9
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 5.9e-34 147.9 103 68.0
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 5.9e-34 147.9 114 62.3
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 5.9e-34 147.9 105 66.7
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 7.6e-34 147.5 114 66.7
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 7.6e-34 147.5 105 67.6
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 1.3e-33 146.7 113 66.4
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 1.3e-33 146.7 114 65.8
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 2.9e-33 145.6 102 71.6
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 3.8e-33 145.2 108 67.6
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 5.0e-33 144.8 108 63.9
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 6.5e-33 144.4 139 57.6
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 6.5e-33 144.4 105 66.7
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 8.5e-33 144.1 111 64.9
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.1e-32 143.7 108 64.8
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 3.2e-32 142.1 114 63.2
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 7.2e-32 141.0 109 61.5
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 7.2e-32 141.0 114 65.8
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 1.2e-31 140.2 94 71.3
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 1.6e-31 139.8 108 62.0
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 1.6e-31 139.8 95 73.7
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 2.1e-31 139.4 104 63.5
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 3.6e-31 138.7 117 57.3
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 3.6e-31 138.7 104 70.2
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 3.6e-31 138.7 107 64.5
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 3.6e-31 138.7 114 63.2
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 3.6e-31 138.7 110 66.4
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 4.6e-31 138.3 117 59.8
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 6.1e-31 137.9 107 64.5
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 6.1e-31 137.9 107 59.8
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 7.9e-31 137.5 105 62.9
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 7.9e-31 137.5 104 65.4
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 1.0e-30 137.1 110 62.7
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 1.3e-30 136.7 107 63.6
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 1.3e-30 136.7 121 56.2
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 1.3e-30 136.7 121 56.2
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 1.8e-30 136.3 107 63.6
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 2.3e-30 136.0 114 61.4
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 2.3e-30 136.0 107 61.7
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 3.0e-30 135.6 108 60.2
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 3.9e-30 135.2 107 62.6
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 3.9e-30 135.2 114 56.1
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 5.1e-30 134.8 107 62.6
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 5.1e-30 134.8 115 56.5
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 6.7e-30 134.4 108 63.0
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 8.7e-30 134.0 91 70.3
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 1.5e-29 133.3 104 67.3
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.9e-29 132.9 104 64.4
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 3.3e-29 132.1 104 61.5
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 5.7e-29 131.3 104 65.4
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 7.4e-29 131.0 105 63.8
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 1.6e-28 129.8 97 64.9
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 2.2e-28 129.4 83 75.9
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 6.3e-28 127.9 82 76.8
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 1.8e-27 126.3 97 62.9
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 2.4e-27 125.9 98 64.3
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 4.1e-27 125.2 96 59.4
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 4.1e-27 125.2 96 59.4
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 3.4e-26 122.1 131 55.7
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 5.9e-26 121.3 82 72.0
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 1.7e-25 119.8 103 50.5
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 5.5e-24 114.8 103 58.3
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 9.4e-24 114.0 102 52.9
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 6.1e-23 111.3 70 81.4
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 7.4e-21 104.4 95 51.6
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 2.2e-20 102.8 70 74.3
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 3.7e-20 102.1 109 52.3
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 5.3e-19 98.2 86 54.7
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 1.0e-17 94.0 105 52.4
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 1.3e-17 93.6 88 48.9
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 4.7e-15 85.1 60 68.3
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.1e-13 80.5 66 59.1
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 6.3e-12 74.7 102 43.1
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 7.0e-11 71.2 66 53.0
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.0e-09 67.4 52 61.5
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 8.5e-09 64.3 81 44.4


User provided reference genes

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