Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G186.62 Capsicum annuum HOM05D004853 ORTHO05D005865 1.1e-116 423.3 211 100.0
CAN.G257.5 Capsicum annuum HOM05D004853 ORTHO05D005865 1.5e-110 402.9 209 96.2
CAN.G128.1 Capsicum annuum HOM05D004853 ORTHO05D005865 3.4e-110 401.7 209 95.7
Solyc09g059440.1 Solanum lycopersicum HOM05D004853 ORTHO05D005865 5.0e-106 387.9 209 92.3
Sopen09g022590 Solanum pennellii HOM05D004853 ORTHO05D005865 5.0e-106 387.9 209 92.3
PGSC0003DMG400027946 Solanum tuberosum HOM05D004853 ORTHO05D005865 5.0e-106 387.9 209 92.3
Nitab4.5_0000045g0440 Nicotiana tabacum HOM05D004853 ORTHO05D005865 1.2e-104 383.3 209 91.4
Nitab4.5_0007437g0010 Nicotiana tabacum HOM05D004853 ORTHO05D005865 1.2e-104 383.3 209 91.4
Peaxi162Scf00238g00032 Petunia axillaris HOM05D004853 ORTHO05D005865 1.5e-102 376.3 209 88.5
Oeu037767.1 Olea europaea HOM05D004853 ORTHO05D005865 1.6e-96 356.3 209 83.7
Dinv12655 Davidia involucrata HOM05D004853 ORTHO05D005865 3.6e-96 355.1 209 83.7
Cc01_g16780 Coffea canephora HOM05D004853 ORTHO05D005865 2.3e-95 352.4 209 83.7
Lj3C839T9 Lonicera japonica HOM05D004853 ORTHO05D005865 2.3e-95 352.4 209 83.7
MSTRG.18839 Avicennia marina HOM05D004853 ORTHO05D005865 2.0e-94 349.4 209 83.3
TWI36G0697 Tripterygium wilfordii HOM05D004853 ORTHO05D005865 2.0e-94 349.4 209 81.3
CSS0034871 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 7.5e-94 347.4 209 81.3
Hma1.2p1_0226F.1_g095440 Hydrangea macrophylla HOM05D004853 ORTHO05D005865 9.8e-94 347.1 209 82.3
Hma1.2p1_2668F.1_g326580 Hydrangea macrophylla HOM05D004853 ORTHO05D005865 9.8e-94 347.1 209 82.3
Cfa004377 Carpinus fangiana HOM05D004853 ORTHO05D005865 2.2e-93 345.9 209 80.9
Ciclev10019411m.g Citrus clementina HOM05D004853 ORTHO05D005865 2.2e-93 345.9 209 80.9
Haze_15035 Corylus avellana HOM05D004853 ORTHO05D005865 2.2e-93 345.9 209 80.9
DCAR_004725 Daucus carota HOM05D004853 ORTHO05D005865 4.9e-93 344.7 209 81.8
DCAR_004733 Daucus carota HOM05D004853 ORTHO05D005865 4.9e-93 344.7 209 81.8
SGA_v2.0_scaffold18G08333 Striga asiatica HOM05D004853 ORTHO05D005865 4.9e-93 344.7 209 81.3
CANSAT01G2121 Cannabis sativa HOM05D004853 ORTHO05D005865 6.4e-93 344.4 209 80.4
CiPaw.01G049500 Carya illinoinensis HOM05D004853 ORTHO05D005865 1.1e-92 343.6 209 80.4
Nn7g37081 Nelumbo nucifera HOM05D004853 ORTHO05D005865 1.1e-92 343.6 209 80.4
Atru.chr6.1420 Acer truncatum HOM05D004853 ORTHO05D005865 1.9e-92 342.8 209 79.4
Actinidia23713 Actinidia chinensis HOM05D004853 ORTHO05D005865 2.4e-92 342.4 209 80.4
Actinidia09471 Actinidia chinensis HOM05D004853 ORTHO05D005865 3.2e-92 342.0 209 80.4
GSVIVG01000797001 Vitis vinifera HOM05D004853 ORTHO05D005865 4.1e-92 341.7 209 79.9
Manes.13G048900 Manihot esculenta HOM05D004853 ORTHO05D005865 5.4e-92 341.3 209 79.4
QL09p051756 Quercus lobata HOM05D004853 ORTHO05D005865 5.4e-92 341.3 209 79.4
QL09p052469 Quercus lobata HOM05D004853 ORTHO05D005865 5.4e-92 341.3 209 79.4
Eucgr.H00778 Eucalyptus grandis HOM05D004853 ORTHO05D005865 7.1e-92 340.9 209 79.9
Cpa.g.sc43.113 Carica papaya HOM05D004853 ORTHO05D005865 1.6e-91 339.7 209 78.9
Sabra15G0112700 Salix brachista HOM05D004853 ORTHO05D005865 1.6e-91 339.7 209 79.4
TAR623G1093 Trochodendron aralioides HOM05D004853 ORTHO05D005865 1.6e-91 339.7 209 79.4
Rhsim09G0044900 Rhododendron simsii HOM05D004853 ORTHO05D005865 2.7e-91 339.0 209 79.4
ClCG09G008800 Citrullus lanatus HOM05D004853 ORTHO05D005865 3.5e-91 338.6 209 79.4
Migut.D02501 Erythranthe guttata HOM05D004853 ORTHO05D005865 3.5e-91 338.6 209 79.9
Potri.015G090600 Populus trichocarpa HOM05D004853 ORTHO05D005865 3.5e-91 338.6 209 78.9
SalBow6G4054 Salvia bowleyana HOM05D004853 ORTHO05D005865 6.0e-91 337.8 209 80.4
MELO3C021058.2 Cucumis melo HOM05D004853 ORTHO05D005865 1.3e-90 336.7 209 78.5
AUR62038821 Chenopodium quinoa HOM05D004853 ORTHO05D005865 1.7e-90 336.3 209 78.9
AUR62043704 Chenopodium quinoa HOM05D004853 ORTHO05D005865 1.7e-90 336.3 209 78.9
Aqoxy1G00113 Aquilegia oxysepala HOM05D004853 ORTHO05D005865 2.3e-90 335.9 209 78.5
TPR.G6418 Trifolium pratense HOM05D004853 ORTHO05D005865 2.3e-90 335.9 209 77.5
Psat3g148200 Pisum sativum HOM05D004853 ORTHO05D005865 3.0e-90 335.5 209 77.5
Ah.15g093470 Amaranthus hybridus HOM05D004853 ORTHO05D005865 3.9e-90 335.1 209 78.5
FvH4_2g18640 Fragaria vesca HOM05D004853 ORTHO05D005865 3.9e-90 335.1 209 77.0
FAN15G3437 Fragaria x ananassa HOM05D004853 ORTHO05D005865 3.9e-90 335.1 209 77.0
FAN27G1226 Fragaria x ananassa HOM05D004853 ORTHO05D005865 3.9e-90 335.1 209 77.0
RcHm_v2.0_Chr6g0284201 Rosa chinensis HOM05D004853 ORTHO05D005865 3.9e-90 335.1 209 77.0
EL10Ac7g17891 Beta vulgaris HOM05D004853 ORTHO05D005865 5.1e-90 334.7 209 78.0
Sed0013559 Sechium edule HOM05D004853 ORTHO05D005865 5.1e-90 334.7 209 78.5
FAN24G1506 Fragaria x ananassa HOM05D004853 ORTHO05D005865 8.6e-90 334.0 209 76.6
PSO384G4190 Papaver somniferum HOM05D004853 ORTHO05D005865 1.5e-89 333.2 209 77.0
Sc17g0002190 Simmondsia chinensis HOM05D004853 ORTHO05D005865 1.9e-89 332.8 209 78.0
TAR376G0972 Trochodendron aralioides HOM05D004853 ORTHO05D005865 1.9e-89 332.8 209 78.0
CiPaw.02G023000 Carya illinoinensis HOM05D004853 ORTHO05D005865 2.5e-89 332.4 209 78.5
CsaV3_7G026150 Cucumis sativus L. HOM05D004853 ORTHO05D005865 2.5e-89 332.4 209 78.5
Medtr7g056153 Medicago truncatula HOM05D004853 ORTHO05D005865 2.5e-89 332.4 209 76.6
unitig_736.g22343 Utricularia gibba HOM05D004853 ORTHO05D005865 2.5e-89 332.4 209 78.5
Ca_06554_v3 Cicer arietinum L. HOM05D004853 ORTHO05D005865 4.3e-89 331.6 209 76.6
unitig_899.g15017 Utricularia gibba HOM05D004853 ORTHO05D005865 4.3e-89 331.6 209 79.9
MBI19_g34091_MAGBIO Magnolia biondii HOM05D004853 ORTHO05D005865 7.3e-89 330.9 209 77.5
Duzib133G1132 Durio zibethinus HOM05D004853 ORTHO05D005865 9.5e-89 330.5 209 77.0
Duzib138G1868 Durio zibethinus HOM05D004853 ORTHO05D005865 9.5e-89 330.5 209 76.1
HanXRQChr14g0439971 Helianthus annuus HOM05D004853 ORTHO05D005865 1.6e-88 329.7 209 78.0
A03p44030 Brassica napus HOM05D004853 ORTHO05D005865 2.8e-88 328.9 209 77.0
BraA03t13534Z Brassica rapa HOM05D004853 ORTHO05D005865 2.8e-88 328.9 209 77.0
HanXRQChr10g0288791 Helianthus annuus HOM05D004853 ORTHO05D005865 3.6e-88 328.6 209 77.5
COL.COLO4_15628 Corchorus olitorius HOM05D004853 ORTHO05D005865 4.7e-88 328.2 209 76.1
BcaB08g34434 Brassica carinata HOM05D004853 ORTHO05D005865 6.2e-88 327.8 209 76.6
AT3G25100 Arabidopsis thaliana HOM05D004853 ORTHO05D005865 1.1e-87 327.0 209 76.6
Gohir.D07G206000 Gossypium hirsutum HOM05D004853 ORTHO05D005865 1.4e-87 326.6 209 76.1
AL3G40790 Arabidopsis lyrata HOM05D004853 ORTHO05D005865 1.8e-87 326.2 209 77.0
AL706U10010 Arabidopsis lyrata HOM05D004853 ORTHO05D005865 1.8e-87 326.2 209 77.0
BcaB06g26724 Brassica carinata HOM05D004853 ORTHO05D005865 1.8e-87 326.2 209 76.6
BcaC06g35779 Brassica carinata HOM05D004853 ORTHO05D005865 1.8e-87 326.2 209 76.6
BolC7t41562H Brassica oleracea HOM05D004853 ORTHO05D005865 1.8e-87 326.2 209 76.6
BraA07t28514Z Brassica rapa HOM05D004853 ORTHO05D005865 1.8e-87 326.2 209 76.6
Sp3g22680 Schrenkiella parvula HOM05D004853 ORTHO05D005865 1.8e-87 326.2 209 76.6
THA.LOC104808789 Tarenaya hassleriana HOM05D004853 ORTHO05D005865 2.3e-87 325.9 210 76.7
CARHR101430 Cardamine hirsuta HOM05D004853 ORTHO05D005865 4.0e-87 325.1 209 76.1
Lsat_1_v5_gn_8_89600 Lactuca sativa HOM05D004853 ORTHO05D005865 4.0e-87 325.1 214 77.6
Prupe.8G199700 Prunus persica HOM05D004853 ORTHO05D005865 4.0e-87 325.1 209 75.6
A07p07260 Brassica napus HOM05D004853 ORTHO05D005865 6.8e-87 324.3 209 76.1
Gorai.001G232300 Gossypium raimondii HOM05D004853 ORTHO05D005865 6.8e-87 324.3 209 75.6
MD05G1172300 Malus domestica HOM05D004853 ORTHO05D005865 6.8e-87 324.3 209 75.1
Aa31LG8G11930 Aethionema arabicum HOM05D004853 ORTHO05D005865 8.9e-87 323.9 209 75.6
Thecc.01G221500 Theobroma cacao HOM05D004853 ORTHO05D005865 8.9e-87 323.9 209 75.1
BcaC01g03244 Brassica carinata HOM05D004853 ORTHO05D005865 1.5e-86 323.2 209 75.6
C03p54420 Brassica napus HOM05D004853 ORTHO05D005865 1.5e-86 323.2 209 75.6
BolC3t17728H Brassica oleracea HOM05D004853 ORTHO05D005865 1.5e-86 323.2 209 75.6
Gohir.A07G199600 Gossypium hirsutum HOM05D004853 ORTHO05D005865 1.5e-86 323.2 209 75.1
C07p10970 Brassica napus HOM05D004853 ORTHO05D005865 2.0e-86 322.8 209 75.6
Thhalv10002454m.g Eutrema salsugineum HOM05D004853 ORTHO05D005865 2.0e-86 322.8 209 76.1
MD10G1160500 Malus domestica HOM05D004853 ORTHO05D005865 2.6e-86 322.4 209 74.6
Carub.0003s2543 Capsella rubella HOM05D004853 ORTHO05D005865 5.8e-86 321.2 209 75.6
CDE07G1728 Ceratophyllum demersum HOM05D004853 ORTHO05D005865 9.9e-86 320.5 209 74.6
Gohir.D11G145500 Gossypium hirsutum HOM05D004853 ORTHO05D005865 2.9e-85 318.9 209 74.2
Gorai.007G156000 Gossypium raimondii HOM05D004853 ORTHO05D005865 3.7e-85 318.5 209 74.6
Phvul.008G130700 Phaseolus vulgaris HOM05D004853 ORTHO05D005865 6.4e-85 317.8 209 75.1
Lalb_Chr03g0041521 Lupinus albus HOM05D004853 ORTHO05D005865 8.3e-85 317.4 209 74.2
Glyma.08G349400 Glycine max HOM05D004853 ORTHO05D005865 1.1e-84 317.0 209 73.7
CDE04G0889 Ceratophyllum demersum HOM05D004853 ORTHO05D005865 1.4e-84 316.6 209 74.2
Gohir.D07G205900 Gossypium hirsutum HOM05D004853 ORTHO05D005865 1.4e-84 316.6 209 73.7
ECA236G0997 Erigeron canadensis HOM05D004853 ORTHO05D005865 3.2e-84 315.5 209 75.6
Glyma.18G167000 Glycine max HOM05D004853 ORTHO05D005865 4.6e-83 311.6 209 72.7
Aa31LG9G4920 Aethionema arabicum HOM05D004853 ORTHO05D005865 1.3e-82 310.1 210 73.3
ATR0068G062 Amborella trichopoda HOM05D004853 ORTHO05D005865 1.5e-81 306.6 209 72.2
VMungo1383G0658 Vigna mungo HOM05D004853 ORTHO05D005865 1.2e-80 303.5 209 71.8
Os11g0128400 Oryza sativa ssp. japonica HOM05D004853 ORTHO05D005865 5.2e-79 298.1 216 69.4
Os12g0124700 Oryza sativa ssp. japonica HOM05D004853 ORTHO05D005865 1.5e-78 296.6 216 69.0
SEGI_13565 Sequoiadendron giganteum HOM05D004853 ORTHO05D005865 1.3e-77 293.5 209 70.3
Zm00001eb405460 Zea mays HOM05D004853 ORTHO05D005865 3.8e-77 292.0 216 68.1
Lj1g0018468 Lotus japonicus HOM05D004853 ORTHO05D005865 1.3e-74 283.5 219 67.1
Gorai.001G232100 Gossypium raimondii HOM05D004853 ORTHO05D005865 1.3e-72 276.9 207 67.1
Gohir.A11G139300 Gossypium hirsutum HOM05D004853 ORTHO05D005865 2.2e-69 266.2 181 71.8
CSS0045377 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 3.8e-69 265.4 165 76.4
Dinv19180 Davidia involucrata HOM05D004853 ORTHO05D005865 7.1e-68 261.2 167 77.8
SMO307G0064 Selaginella moellendorffii HOM05D004853 ORTHO05D005865 1.1e-63 247.3 209 60.3
Gohir.A07G199500 Gossypium hirsutum HOM05D004853 ORTHO05D005865 6.9e-63 244.6 209 59.8
Mapoly0045s0042 Marchantia polymorpha HOM05D004853 ORTHO05D005865 1.8e-55 219.9 213 53.1
CBR_g40148 Chara braunii HOM05D004853 ORTHO05D005865 4.0e-55 218.8 208 54.8
Pp3c23_19980 Physcomitrium patens HOM05D004853 ORTHO05D005865 1.3e-53 213.8 192 53.6
CBR_g23403 Chara braunii HOM05D004853 ORTHO05D005865 6.9e-47 191.4 177 55.4
CSS0009877 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 4.6e-43 178.7 108 80.6
Sabra02G0118100 Salix brachista HOM05D004853 ORTHO05D005865 2.4e-39 166.4 127 67.7
AagrBONN_evm.TU.Sc2ySwM_117.731 Anthoceros agrestis HOM05D004853 ORTHO05D005865 2.2e-37 159.8 192 45.8
MCO03G169 Micromonas commoda HOM05D004853 ORTHO05D005865 4.3e-33 145.6 202 41.1
Zm00001eb163660 Zea mays HOM05D004853 ORTHO05D005865 1.0e-29 134.4 98 68.4
CSS0030898 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 9.4e-28 127.9 86 72.1
Ah.03g146210 Amaranthus hybridus HOM05D004853 ORTHO05D005865 2.1e-27 126.7 114 59.6
arahy.Tifrunner.gnm1.ann1.23GIHT Arachis hypogaea HOM05D004853 ORTHO05D005865 1.5e-25 120.6 94 60.6
PRCOL_00002078 Prasinoderma coloniale HOM05D004853 ORTHO05D005865 1.8e-23 113.6 191 33.0
AUR62016553 Chenopodium quinoa HOM05D004853 ORTHO05D005865 2.4e-15 86.7 168 36.9
Cre06.g270250 Chlamydomonas reinhardtii HOM05D004853 ORTHO05D005865 5.9e-06 55.5 209 22.0
ECA233G3738 Erigeron canadensis HOM05D004853 ORTHO05D005865 7.7e-06 55.1 36 72.2


User provided reference genes

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