Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G186.61 Capsicum annuum HOM05D004853 ORTHO05D005865 7.0e-53 210.7 134 100.0
CAN.G257.5 Capsicum annuum HOM05D004853 ORTHO05D005865 8.0e-33 144.1 212 57.1
CAN.G128.1 Capsicum annuum HOM05D004853 ORTHO05D005865 1.4e-32 143.3 212 57.5
Nitab4.5_0000045g0440 Nicotiana tabacum HOM05D004853 ORTHO05D005865 3.1e-32 142.1 213 56.3
Solyc09g059440.1 Solanum lycopersicum HOM05D004853 ORTHO05D005865 3.1e-32 142.1 213 55.4
Sopen09g022590 Solanum pennellii HOM05D004853 ORTHO05D005865 3.1e-32 142.1 213 56.8
Peaxi162Scf00238g00032 Petunia axillaris HOM05D004853 ORTHO05D005865 5.2e-32 141.4 211 55.5
Nitab4.5_0007437g0010 Nicotiana tabacum HOM05D004853 ORTHO05D005865 8.9e-32 140.6 213 55.4
PGSC0003DMG400027946 Solanum tuberosum HOM05D004853 ORTHO05D005865 2.0e-31 139.4 213 56.3
Dinv12655 Davidia involucrata HOM05D004853 ORTHO05D005865 1.0e-27 127.1 212 50.5
TAR623G1093 Trochodendron aralioides HOM05D004853 ORTHO05D005865 1.7e-27 126.3 212 49.1
MSTRG.18839 Avicennia marina HOM05D004853 ORTHO05D005865 2.3e-27 125.9 213 51.6
Dinv19180 Davidia involucrata HOM05D004853 ORTHO05D005865 2.3e-27 125.9 213 51.2
MBI19_g34091_MAGBIO Magnolia biondii HOM05D004853 ORTHO05D005865 8.6e-27 124.0 208 51.9
TAR376G0972 Trochodendron aralioides HOM05D004853 ORTHO05D005865 1.5e-26 123.2 212 49.5
Lj3C839T9 Lonicera japonica HOM05D004853 ORTHO05D005865 1.9e-26 122.9 213 46.5
Cc01_g16780 Coffea canephora HOM05D004853 ORTHO05D005865 2.5e-26 122.5 214 50.0
Oeu037767.1 Olea europaea HOM05D004853 ORTHO05D005865 4.3e-26 121.7 212 47.6
Eucgr.H00778 Eucalyptus grandis HOM05D004853 ORTHO05D005865 1.2e-25 120.2 212 50.0
Potri.015G090600 Populus trichocarpa HOM05D004853 ORTHO05D005865 1.6e-25 119.8 210 49.5
Hma1.2p1_0226F.1_g095440 Hydrangea macrophylla HOM05D004853 ORTHO05D005865 3.6e-25 118.6 211 49.3
Hma1.2p1_2668F.1_g326580 Hydrangea macrophylla HOM05D004853 ORTHO05D005865 3.6e-25 118.6 211 49.3
CSS0034871 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 4.7e-25 118.2 215 50.7
CiPaw.02G023000 Carya illinoinensis HOM05D004853 ORTHO05D005865 4.7e-25 118.2 210 44.3
Rhsim09G0044900 Rhododendron simsii HOM05D004853 ORTHO05D005865 6.2e-25 117.9 215 47.4
PSO384G4190 Papaver somniferum HOM05D004853 ORTHO05D005865 1.4e-24 116.7 213 50.7
RcHm_v2.0_Chr6g0284201 Rosa chinensis HOM05D004853 ORTHO05D005865 1.4e-24 116.7 212 50.5
Sabra15G0112700 Salix brachista HOM05D004853 ORTHO05D005865 1.4e-24 116.7 210 49.0
Actinidia09471 Actinidia chinensis HOM05D004853 ORTHO05D005865 1.8e-24 116.3 210 49.0
Nn7g37081 Nelumbo nucifera HOM05D004853 ORTHO05D005865 1.8e-24 116.3 213 48.8
ClCG09G008800 Citrullus lanatus HOM05D004853 ORTHO05D005865 2.3e-24 115.9 210 48.1
unitig_899.g15017 Utricularia gibba HOM05D004853 ORTHO05D005865 2.3e-24 115.9 213 45.5
MELO3C021058.2 Cucumis melo HOM05D004853 ORTHO05D005865 5.2e-24 114.8 210 48.6
QL09p052469 Quercus lobata HOM05D004853 ORTHO05D005865 6.8e-24 114.4 209 45.9
CsaV3_7G026150 Cucumis sativus L. HOM05D004853 ORTHO05D005865 1.2e-23 113.6 210 48.1
DCAR_004733 Daucus carota HOM05D004853 ORTHO05D005865 1.5e-23 113.2 160 60.6
Cfa004377 Carpinus fangiana HOM05D004853 ORTHO05D005865 2.0e-23 112.8 208 48.6
Haze_15035 Corylus avellana HOM05D004853 ORTHO05D005865 2.0e-23 112.8 208 48.6
EL10Ac7g17891 Beta vulgaris HOM05D004853 ORTHO05D005865 2.6e-23 112.5 224 42.9
Actinidia23713 Actinidia chinensis HOM05D004853 ORTHO05D005865 3.4e-23 112.1 210 48.1
QL09p051756 Quercus lobata HOM05D004853 ORTHO05D005865 3.4e-23 112.1 209 45.9
DCAR_004725 Daucus carota HOM05D004853 ORTHO05D005865 7.5e-23 110.9 213 47.9
SGA_v2.0_scaffold18G08333 Striga asiatica HOM05D004853 ORTHO05D005865 7.5e-23 110.9 210 47.1
FAN27G1226 Fragaria x ananassa HOM05D004853 ORTHO05D005865 1.3e-22 110.2 216 50.0
SalBow6G4054 Salvia bowleyana HOM05D004853 ORTHO05D005865 1.3e-22 110.2 211 46.4
FAN24G1506 Fragaria x ananassa HOM05D004853 ORTHO05D005865 1.7e-22 109.8 214 48.6
CDE07G1728 Ceratophyllum demersum HOM05D004853 ORTHO05D005865 2.9e-22 109.0 207 45.9
FvH4_2g18640 Fragaria vesca HOM05D004853 ORTHO05D005865 2.9e-22 109.0 216 49.5
Sed0013559 Sechium edule HOM05D004853 ORTHO05D005865 3.7e-22 108.6 210 46.2
FAN15G3437 Fragaria x ananassa HOM05D004853 ORTHO05D005865 4.9e-22 108.2 216 49.1
TWI36G0697 Tripterygium wilfordii HOM05D004853 ORTHO05D005865 4.9e-22 108.2 214 47.2
CSS0045377 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 6.4e-22 107.8 214 49.1
Ciclev10019411m.g Citrus clementina HOM05D004853 ORTHO05D005865 1.1e-21 107.1 208 47.1
MD10G1160500 Malus domestica HOM05D004853 ORTHO05D005865 3.2e-21 105.5 215 50.7
Prupe.8G199700 Prunus persica HOM05D004853 ORTHO05D005865 3.2e-21 105.5 217 48.8
unitig_736.g22343 Utricularia gibba HOM05D004853 ORTHO05D005865 4.1e-21 105.1 213 41.8
Atru.chr6.1420 Acer truncatum HOM05D004853 ORTHO05D005865 7.1e-21 104.4 205 46.3
Ah.15g093470 Amaranthus hybridus HOM05D004853 ORTHO05D005865 7.1e-21 104.4 223 40.8
Gohir.A07G199500 Gossypium hirsutum HOM05D004853 ORTHO05D005865 7.1e-21 104.4 149 57.0
Lsat_1_v5_gn_8_89600 Lactuca sativa HOM05D004853 ORTHO05D005865 9.2e-21 104.0 213 48.8
Manes.13G048900 Manihot esculenta HOM05D004853 ORTHO05D005865 9.2e-21 104.0 212 47.6
Sc17g0002190 Simmondsia chinensis HOM05D004853 ORTHO05D005865 2.1e-20 102.8 227 42.3
Aqoxy1G00113 Aquilegia oxysepala HOM05D004853 ORTHO05D005865 2.7e-20 102.4 208 43.3
MD05G1172300 Malus domestica HOM05D004853 ORTHO05D005865 1.0e-19 100.5 215 49.3
HPP92_007506 Vanilla planifolia HOM05D004853 ORTHO05D005865 1.7e-19 99.8 207 46.4
CiPaw.01G049500 Carya illinoinensis HOM05D004853 ORTHO05D005865 6.6e-19 97.8 210 46.7
CANSAT01G2121 Cannabis sativa HOM05D004853 ORTHO05D005865 1.5e-18 96.7 214 45.8
AUR62043704 Chenopodium quinoa HOM05D004853 ORTHO05D005865 1.9e-18 96.3 224 33.9
Gorai.001G232100 Gossypium raimondii HOM05D004853 ORTHO05D005865 2.5e-18 95.9 189 38.6
Gorai.001G232300 Gossypium raimondii HOM05D004853 ORTHO05D005865 3.3e-18 95.5 216 42.6
Gohir.A07G199600 Gossypium hirsutum HOM05D004853 ORTHO05D005865 5.6e-18 94.7 218 42.2
AUR62038821 Chenopodium quinoa HOM05D004853 ORTHO05D005865 7.3e-18 94.4 224 33.5
Aa31LG8G11930 Aethionema arabicum HOM05D004853 ORTHO05D005865 9.5e-18 94.0 221 43.0
A03p44030 Brassica napus HOM05D004853 ORTHO05D005865 9.5e-18 94.0 210 41.4
THA.LOC104808789 Tarenaya hassleriana HOM05D004853 ORTHO05D005865 1.2e-17 93.6 221 45.7
Gohir.D07G206000 Gossypium hirsutum HOM05D004853 ORTHO05D005865 1.6e-17 93.2 216 42.1
Carub.0003s2543 Capsella rubella HOM05D004853 ORTHO05D005865 2.8e-17 92.4 219 42.9
Gohir.D07G205900 Gossypium hirsutum HOM05D004853 ORTHO05D005865 3.6e-17 92.0 194 44.8
HanXRQChr14g0439971 Helianthus annuus HOM05D004853 ORTHO05D005865 3.6e-17 92.0 209 45.0
Duzib133G1132 Durio zibethinus HOM05D004853 ORTHO05D005865 6.2e-17 91.3 214 43.9
Thhalv10002454m.g Eutrema salsugineum HOM05D004853 ORTHO05D005865 6.2e-17 91.3 213 42.7
Sp3g22680 Schrenkiella parvula HOM05D004853 ORTHO05D005865 6.2e-17 91.3 217 41.9
HanXRQChr10g0288791 Helianthus annuus HOM05D004853 ORTHO05D005865 1.1e-16 90.5 153 41.8
Thecc.01G221500 Theobroma cacao HOM05D004853 ORTHO05D005865 1.4e-16 90.1 216 40.7
AT3G25100 Arabidopsis thaliana HOM05D004853 ORTHO05D005865 1.8e-16 89.7 213 41.8
Duzib138G1868 Durio zibethinus HOM05D004853 ORTHO05D005865 1.8e-16 89.7 216 41.7
CARHR101430 Cardamine hirsuta HOM05D004853 ORTHO05D005865 3.1e-16 89.0 213 41.3
ECA236G0997 Erigeron canadensis HOM05D004853 ORTHO05D005865 3.1e-16 89.0 159 40.3
AL3G40790 Arabidopsis lyrata HOM05D004853 ORTHO05D005865 4.0e-16 88.6 217 41.9
Aa31LG9G4920 Aethionema arabicum HOM05D004853 ORTHO05D005865 6.8e-16 87.8 215 42.8
BcaB06g26724 Brassica carinata HOM05D004853 ORTHO05D005865 8.9e-16 87.4 216 43.1
BcaC06g35779 Brassica carinata HOM05D004853 ORTHO05D005865 8.9e-16 87.4 212 39.6
BolC7t41562H Brassica oleracea HOM05D004853 ORTHO05D005865 8.9e-16 87.4 212 39.6
BraA03t13534Z Brassica rapa HOM05D004853 ORTHO05D005865 1.2e-15 87.0 213 41.3
BcaB08g34434 Brassica carinata HOM05D004853 ORTHO05D005865 2.0e-15 86.3 214 42.5
Gorai.007G156000 Gossypium raimondii HOM05D004853 ORTHO05D005865 2.0e-15 86.3 154 39.6
BcaC01g03244 Brassica carinata HOM05D004853 ORTHO05D005865 2.6e-15 85.9 209 40.2
C03p54420 Brassica napus HOM05D004853 ORTHO05D005865 2.6e-15 85.9 209 40.2
BolC3t17728H Brassica oleracea HOM05D004853 ORTHO05D005865 2.6e-15 85.9 209 40.2
C07p10970 Brassica napus HOM05D004853 ORTHO05D005865 3.4e-15 85.5 212 33.5
Phvul.008G130700 Phaseolus vulgaris HOM05D004853 ORTHO05D005865 5.8e-15 84.7 204 42.6
COL.COLO4_15628 Corchorus olitorius HOM05D004853 ORTHO05D005865 1.3e-14 83.6 153 39.2
Gohir.A11G139300 Gossypium hirsutum HOM05D004853 ORTHO05D005865 1.7e-14 83.2 138 40.6
SEGI_13565 Sequoiadendron giganteum HOM05D004853 ORTHO05D005865 2.9e-14 82.4 161 36.0
Glyma.18G167000 Glycine max HOM05D004853 ORTHO05D005865 3.7e-14 82.0 206 41.3
BraA07t28514Z Brassica rapa HOM05D004853 ORTHO05D005865 6.4e-14 81.3 204 38.2
A07p07260 Brassica napus HOM05D004853 ORTHO05D005865 8.4e-14 80.9 204 37.3
Glyma.08G349400 Glycine max HOM05D004853 ORTHO05D005865 1.1e-13 80.5 151 35.8
Os11g0128400 Oryza sativa ssp. japonica HOM05D004853 ORTHO05D005865 1.4e-13 80.1 214 34.6
Zm00001eb405460 Zea mays HOM05D004853 ORTHO05D005865 3.2e-13 79.0 155 34.8
Migut.D02501 Erythranthe guttata HOM05D004853 ORTHO05D005865 4.1e-13 78.6 53 79.2
Cpa.g.sc43.113 Carica papaya HOM05D004853 ORTHO05D005865 7.1e-13 77.8 223 39.5
Os12g0124700 Oryza sativa ssp. japonica HOM05D004853 ORTHO05D005865 7.1e-13 77.8 214 34.1
VMungo1383G0658 Vigna mungo HOM05D004853 ORTHO05D005865 9.2e-13 77.4 205 41.5
GSVIVG01000797001 Vitis vinifera HOM05D004853 ORTHO05D005865 1.6e-12 76.6 52 76.9
ATR0068G062 Amborella trichopoda HOM05D004853 ORTHO05D005865 4.6e-12 75.1 121 47.1
Ca_06554_v3 Cicer arietinum L. HOM05D004853 ORTHO05D005865 1.3e-11 73.6 145 36.6
CDE04G0889 Ceratophyllum demersum HOM05D004853 ORTHO05D005865 5.1e-11 71.6 175 42.3
TPR.G6418 Trifolium pratense HOM05D004853 ORTHO05D005865 1.1e-10 70.5 129 37.2
Psat3g148200 Pisum sativum HOM05D004853 ORTHO05D005865 1.5e-10 70.1 146 34.9
Medtr7g056153 Medicago truncatula HOM05D004853 ORTHO05D005865 2.5e-10 69.3 145 34.5
Lj1g0018468 Lotus japonicus HOM05D004853 ORTHO05D005865 9.6e-10 67.4 208 38.0
arahy.Tifrunner.gnm1.ann1.23GIHT Arachis hypogaea HOM05D004853 ORTHO05D005865 2.1e-09 66.2 159 33.3
Mapoly0045s0042 Marchantia polymorpha HOM05D004853 ORTHO05D005865 1.1e-08 63.9 159 32.1
Lalb_Chr03g0041521 Lupinus albus HOM05D004853 ORTHO05D005865 2.4e-08 62.8 52 61.5
AL706U10010 Arabidopsis lyrata HOM05D004853 ORTHO05D005865 8.9e-08 60.8 90 63.3
Zm00001eb163670 Zea mays HOM05D004853 ORTHO05D005865 5.8e-07 58.2 54 53.7
Sabra10G0126900 Salix brachista HOM05D004853 ORTHO05D005865 2.9e-06 55.8 85 40.0
Pp3c23_19980 Physcomitrium patens HOM05D004853 ORTHO05D005865 8.4e-06 54.3 52 55.8


User provided reference genes

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