Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G185.3 Capsicum annuum HOM05D009823 ORTHO05D011888 2.7e-266 921.4 448 100.0
CAN.G277.8 Capsicum annuum HOM05D001060 ORTHO05D011888 1.7e-50 204.5 333 42.3
CAN.G93.44 Capsicum annuum HOM05D009823 ORTHO05D010250 7.8e-48 195.7 117 79.5
CAN.G702.29 Capsicum annuum HOM05D000004 ORTHO05D010250 5.0e-47 193.0 117 76.9
CAN.G1017.2 Capsicum annuum HOM05D009823 ORTHO05D011888 1.5e-43 181.4 119 72.3
CAN.G811.2 Capsicum annuum HOM05D009823 ORTHO05D010250 5.4e-41 172.9 105 76.2
CAN.G143.46 Capsicum annuum HOM05D009823 ORTHO05D011888 1.6e-40 171.4 117 71.8
CAN.G341.14 Capsicum annuum HOM05D000107 ORTHO05D000568 2.1e-29 134.4 121 55.4
Sopen03g020940 Solanum pennellii HOM05D000107 ORTHO05D000062 2.9e-26 124.0 120 52.5
CAN.G166.1 Capsicum annuum HOM05D009823 ORTHO05D011888 1.2e-24 118.6 107 55.1
CAN.G989.1 Capsicum annuum HOM05D005506 ORTHO05D004172 1.0e-23 115.5 64 79.7
CAN.G556.10 Capsicum annuum HOM05D009823 ORTHO05D010250 2.5e-22 110.9 76 75.0
CAN.G1683.3 Capsicum annuum HOM05D009823 ORTHO05D011888 7.3e-22 109.4 108 49.1
CAN.G65.22 Capsicum annuum HOM05D009823 ORTHO05D011888 7.3e-22 109.4 68 79.4
CAN.G734.4 Capsicum annuum HOM05D009823 ORTHO05D011888 9.0e-20 102.4 68 75.0
Sopen03g010730 Solanum pennellii HOM05D000002 ORTHO05D010545 4.6e-16 90.1 125 40.8
CAN.G165.31 Capsicum annuum HOM05D009823 ORTHO05D011888 2.3e-15 87.8 64 67.2
PGSC0003DMG400030179 Solanum tuberosum HOM05D007844 ORTHO05D000568 1.5e-14 85.1 135 38.5
CAN.G226.11 Capsicum annuum HOM05D009823 ORTHO05D011888 1.9e-14 84.7 66 59.1
CAN.G243.5 Capsicum annuum HOM05D002493 ORTHO05D011888 1.6e-13 81.6 77 51.9
Sopen01g027940 Solanum pennellii HOM05D000107 ORTHO05D000568 2.8e-13 80.9 125 41.6
CAN.G509.11 Capsicum annuum HOM05D000907 ORTHO05D011888 3.6e-13 80.5 57 66.7
CAN.G11330.1 Capsicum annuum HOM05D009823 ORTHO05D011888 1.8e-12 78.2 55 63.6
CAN.G813.1 Capsicum annuum HOM05D009823 ORTHO05D011888 1.8e-12 78.2 61 63.9
CAN.G177.16 Capsicum annuum HOM05D000004 ORTHO05D011888 1.5e-11 75.1 64 57.8
VMungo0464G1759 Vigna mungo HOM05D000107 ORTHO05D011906 2.6e-11 74.3 118 35.6
CAN.G811.1 Capsicum annuum HOM05D009823 ORTHO05D011888 4.5e-11 73.6 54 61.1
Sopen06g016340 Solanum pennellii HOM05D000002 ORTHO05D010545 1.3e-10 72.0 102 44.1
Peaxi162Scf01016g00111 Petunia axillaris HOM05D016080 ORTHO05D015731 2.4e-09 67.8 90 41.1
Ca_02618_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 3.2e-09 67.4 128 35.2
TPR.G25459 Trifolium pratense HOM05D024219 ORTHO05D000568 1.2e-08 65.5 166 32.5
CAN.G547.23 Capsicum annuum HOM05D000868 ORTHO05D000711 1.6e-08 65.1 67 53.7
CAN.G6027.1 Capsicum annuum HOM05D009823 ORTHO05D011888 1.6e-08 65.1 41 65.9
Peaxi162Scf00248g00212 Petunia axillaris HOM05D016080 ORTHO05D015731 1.6e-08 65.1 89 39.3
CAN.G716.10 Capsicum annuum HOM05D009823 ORTHO05D011888 3.5e-08 63.9 40 77.5
Ca_04921_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 3.5e-08 63.9 46 54.3
Peaxi162Scf00177g01129 Petunia axillaris HOM05D016080 ORTHO05D015731 3.5e-08 63.9 90 40.0
CAN.G1933.1 Capsicum annuum HOM05D009823 ORTHO05D011888 4.6e-08 63.5 41 63.4
Ca_19967_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 6.0e-08 63.2 129 31.8
Nitab4.5_0006151g0010 Nicotiana tabacum HOM05D012624 ORTHO05D012885 7.9e-08 62.8 85 36.5
Ca_12335_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 1.0e-07 62.4 125 31.2
Ca_20464_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000568 1.3e-07 62.0 125 31.2
Ca_20094_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.8e-07 61.6 128 32.8
SHI15280 Sapria himalayana HOM05D007949 ORTHO05D010250 1.8e-07 61.6 104 34.6
TWI63G0761 Tripterygium wilfordii HOM05D000107 ORTHO05D000568 2.3e-07 61.2 132 30.3
Ca_08869_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 3.0e-07 60.8 120 33.3
TWI36G0445 Tripterygium wilfordii HOM05D000107 ORTHO05D000568 3.0e-07 60.8 134 29.9
TWI53G0600 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 3.9e-07 60.5 134 29.9
PGSC0003DMG400010969 Solanum tuberosum HOM05D000107 ORTHO05D000062 6.7e-07 59.7 89 39.3
Ca_24261_v3 Cicer arietinum L. HOM05D000107 ORTHO05D010250 8.7e-07 59.3 120 31.7
TWI18G0967 Tripterygium wilfordii HOM05D000107 ORTHO05D000568 1.5e-06 58.5 136 30.9
TWI75G1855 Tripterygium wilfordii HOM05D000107 ORTHO05D000568 1.5e-06 58.5 111 33.3
HanXRQChr07g0194151 Helianthus annuus HOM05D000107 ORTHO05D000062 1.9e-06 58.2 145 26.9
SHI20772 Sapria himalayana HOM05D007949 ORTHO05D010250 2.5e-06 57.8 108 31.5
SHI32436 Sapria himalayana HOM05D007949 ORTHO05D000568 2.5e-06 57.8 102 35.3
SHI35268 Sapria himalayana HOM05D007949 ORTHO05D010250 3.3e-06 57.4 108 31.5
HanXRQChr05g0154061 Helianthus annuus HOM05D000107 ORTHO05D000568 4.3e-06 57.0 113 31.0
HanXRQChr05g0154091 Helianthus annuus HOM05D000107 ORTHO05D000568 4.3e-06 57.0 113 31.0
CAN.G1125.8 Capsicum annuum HOM05D009823 ORTHO05D011888 5.6e-06 56.6 38 68.4
SHI05045 Sapria himalayana HOM05D007949 ORTHO05D010250 5.6e-06 56.6 115 30.4
Ca_19089_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000568 7.4e-06 56.2 129 30.2
PSO832G1904 Papaver somniferum HOM05D000107 ORTHO05D000062 7.4e-06 56.2 108 32.4
TWI73G0477 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 7.4e-06 56.2 135 28.1
SHI22820 Sapria himalayana HOM05D007949 ORTHO05D000062 9.6e-06 55.8 112 31.2


User provided reference genes

Program Settings