Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G185.14 Capsicum annuum HOM05D003821 ORTHO05D004449 5.9e-40 167.2 89 100.0
Nitab4.5_0000191g0110 Nicotiana tabacum HOM05D003821 ORTHO05D004449 7.5e-27 123.6 114 64.0
Nitab4.5_0003546g0070 Nicotiana tabacum HOM05D003821 ORTHO05D004449 4.1e-25 117.9 109 63.3
Rhsim02G0009100 Rhododendron simsii HOM05D003821 ORTHO05D004449 1.9e-22 109.0 102 64.7
PGSC0003DMG400022856 Solanum tuberosum HOM05D003821 ORTHO05D004449 1.9e-22 109.0 118 58.5
Hma1.2p1_0078F.1_g040550 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 2.5e-22 108.6 88 70.5
Migut.G00164 Erythranthe guttata HOM05D003821 ORTHO05D004449 9.4e-22 106.7 86 68.6
Nitab4.5_0004438g0100 Nicotiana tabacum HOM05D003821 ORTHO05D004449 2.1e-21 105.5 93 64.5
SGA_v2.0_scaffold91G27999 Striga asiatica HOM05D003821 ORTHO05D004449 2.7e-21 105.1 113 54.9
Oeu027727.1 Olea europaea HOM05D003821 ORTHO05D004449 3.6e-21 104.8 86 65.1
SGA_v2.0_scaffold147G36288 Striga asiatica HOM05D003821 ORTHO05D004449 6.1e-21 104.0 86 68.6
Oeu026313.1 Olea europaea HOM05D003821 ORTHO05D004449 1.0e-20 103.2 88 64.8
Peaxi162Scf00048g00209 Petunia axillaris HOM05D003821 ORTHO05D004449 1.8e-20 102.4 81 72.8
Nitab4.5_0000570g0120 Nicotiana tabacum HOM05D003821 ORTHO05D004449 1.2e-19 99.8 89 61.8
MSTRG.3917 Avicennia marina HOM05D003821 ORTHO05D004449 1.5e-19 99.4 86 62.8
MSTRG.24794 Avicennia marina HOM05D003821 ORTHO05D004449 1.3e-18 96.3 87 60.9
SGA_v2.0_scaffold428G51522 Striga asiatica HOM05D003821 ORTHO05D004449 2.2e-18 95.5 86 62.8
vmacro15236 Vaccinium macrocarpon HOM05D003821 ORTHO05D004449 1.4e-17 92.8 114 52.6
TWI53G1984 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 1.8e-17 92.4 85 60.0
AUR62008616 Chenopodium quinoa HOM05D003821 ORTHO05D004449 3.1e-17 91.7 87 64.4
TWI09G0102 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 4.1e-17 91.3 85 58.8
FAN12G1096 Fragaria x ananassa HOM05D003821 ORTHO05D004449 5.4e-17 90.9 87 60.9
Haze_01204 Corylus avellana HOM05D003821 ORTHO05D004449 7.0e-17 90.5 108 54.6
Manes.15G012400 Manihot esculenta HOM05D003821 ORTHO05D004449 2.7e-16 88.6 87 59.8
CAN.G484.32 Capsicum annuum HOM05D003821 ORTHO05D004449 3.5e-16 88.2 133 47.4
VMungo1309G1076 Vigna mungo HOM05D003821 ORTHO05D004449 3.5e-16 88.2 78 61.5
AUR62033168 Chenopodium quinoa HOM05D003821 ORTHO05D004449 4.5e-16 87.8 87 62.1
arahy.Tifrunner.gnm1.ann1.UD53LE Arachis hypogaea HOM05D003821 ORTHO05D004449 5.9e-16 87.4 69 66.7
FAN07G0841 Fragaria x ananassa HOM05D003821 ORTHO05D004449 5.9e-16 87.4 88 58.0
DCAR_013986 Daucus carota HOM05D003821 ORTHO05D004449 1.0e-15 86.7 102 54.9
Sed0001615 Sechium edule HOM05D003821 ORTHO05D004449 1.0e-15 86.7 103 56.3
Haze_04896 Corylus avellana HOM05D003821 ORTHO05D004449 1.3e-15 86.3 107 51.4
CiPaw.07G106400 Carya illinoinensis HOM05D003821 ORTHO05D004449 2.3e-15 85.5 79 60.8
CiPaw.08G097300 Carya illinoinensis HOM05D003821 ORTHO05D004449 2.3e-15 85.5 79 60.8
Atru.chr4.2835 Acer truncatum HOM05D003821 ORTHO05D004449 6.6e-15 84.0 135 43.7
Actinidia32231 Actinidia chinensis HOM05D003821 ORTHO05D004449 8.6e-15 83.6 88 56.8
A03p49340 Brassica napus HOM05D003821 ORTHO05D004449 8.6e-15 83.6 87 60.9
FAN17G0959 Fragaria x ananassa HOM05D003821 ORTHO05D004449 8.6e-15 83.6 82 62.2
AT4G15802 Arabidopsis thaliana HOM05D003821 ORTHO05D004449 1.1e-14 83.2 88 58.0
AL7G39490 Arabidopsis lyrata HOM05D003821 ORTHO05D004449 1.5e-14 82.8 88 58.0
vmacro08148 Vaccinium macrocarpon HOM05D003821 ORTHO05D004449 1.5e-14 82.8 153 41.2
FAN27G2508 Fragaria x ananassa HOM05D003821 ORTHO05D004449 2.5e-14 82.0 87 52.9
Psat3g022560 Pisum sativum HOM05D003821 ORTHO05D004449 2.5e-14 82.0 88 55.7
SalBow2G1159 Salvia bowleyana HOM05D003821 ORTHO05D004449 2.5e-14 82.0 98 52.0
CARHR290310 Cardamine hirsuta HOM05D003821 ORTHO05D004449 3.3e-14 81.6 88 56.8
FAN15G2810 Fragaria x ananassa HOM05D003821 ORTHO05D004449 3.3e-14 81.6 87 54.0
FAN24G2279 Fragaria x ananassa HOM05D003821 ORTHO05D004449 3.3e-14 81.6 87 54.0
A01p21700 Brassica napus HOM05D000802 ORTHO05D013138 4.2e-14 81.3 89 60.7
COL.COLO4_13871 Corchorus olitorius HOM05D003821 ORTHO05D004449 5.5e-14 80.9 93 54.8
QL10p053326 Quercus lobata HOM05D003821 ORTHO05D004449 5.5e-14 80.9 105 51.4
QL10p054532 Quercus lobata HOM05D003821 ORTHO05D004449 5.5e-14 80.9 105 51.4
Cpa.g.sc9.208 Carica papaya HOM05D003821 ORTHO05D004449 7.2e-14 80.5 104 50.0
Phvul.009G247900 Phaseolus vulgaris HOM05D003821 ORTHO05D004449 7.2e-14 80.5 70 61.4
Gorai.004G142200 Gossypium raimondii HOM05D003821 ORTHO05D004449 1.2e-13 79.7 129 43.4
TPR.G9594 Trifolium pratense HOM05D003821 ORTHO05D004449 1.2e-13 79.7 115 48.7
Ca_10352_v3 Cicer arietinum L. HOM05D003821 ORTHO05D004449 1.6e-13 79.3 87 52.9
ClCG09G006050 Citrullus lanatus HOM05D003821 ORTHO05D004449 1.6e-13 79.3 79 58.2
FAN20G2567 Fragaria x ananassa HOM05D000897 ORTHO05D000716 1.6e-13 79.3 87 52.9
Carub.0007s2585 Capsella rubella HOM05D003821 ORTHO05D004449 2.1e-13 79.0 72 59.7
Ah.04g153550 Amaranthus hybridus HOM05D003821 ORTHO05D004449 2.8e-13 78.6 90 55.6
arahy.Tifrunner.gnm1.ann1.LH51N9 Arachis hypogaea HOM05D003821 ORTHO05D004449 2.8e-13 78.6 80 58.8
DCAR_002813 Daucus carota HOM05D003821 ORTHO05D004449 3.6e-13 78.2 78 57.7
Medtr1g088760 Medicago truncatula HOM05D003821 ORTHO05D004449 8.0e-13 77.0 115 45.2
BraA08t33190Z Brassica rapa HOM05D003821 ORTHO05D004449 1.4e-12 76.3 109 51.4
BraA01t02079Z Brassica rapa HOM05D000802 ORTHO05D013138 1.8e-12 75.9 105 52.4
BcaC06g33446 Brassica carinata HOM05D003821 ORTHO05D004449 3.0e-12 75.1 83 56.6
Rhsim04G0221500 Rhododendron simsii HOM05D003821 ORTHO05D004449 3.0e-12 75.1 49 79.6
Sc24g0003850 Simmondsia chinensis HOM05D000714 ORTHO05D000544 4.0e-12 74.7 85 51.8
BcaC07g37933 Brassica carinata HOM05D003821 ORTHO05D004449 5.2e-12 74.3 89 58.4
RcHm_v2.0_Chr6g0293541 Rosa chinensis HOM05D003821 ORTHO05D004449 6.8e-12 73.9 110 45.5
TPR.G33980 Trifolium pratense HOM05D003821 ORTHO05D004449 6.8e-12 73.9 107 46.7
Thecc.04G284600 Theobroma cacao HOM05D003821 ORTHO05D004449 1.5e-11 72.8 85 50.6
BcaC06g32965 Brassica carinata HOM05D003821 ORTHO05D004449 2.0e-11 72.4 81 55.6
EL10Ac7g17441 Beta vulgaris HOM05D003821 ORTHO05D004449 2.6e-11 72.0 125 37.6
A08p11990 Brassica napus HOM05D003821 ORTHO05D004449 3.4e-11 71.6 91 54.9
Migut.N00088 Erythranthe guttata HOM05D003821 ORTHO05D004449 1.3e-10 69.7 86 50.0
BcaNung00244 Brassica carinata HOM05D000802 ORTHO05D013138 2.8e-10 68.6 88 52.3
BraA03t14035Z Brassica rapa HOM05D003821 ORTHO05D004449 2.8e-10 68.6 85 52.9
TAR362G0968 Trochodendron aralioides HOM05D003821 ORTHO05D004449 3.7e-10 68.2 86 50.0
BcaB04g18333 Brassica carinata HOM05D003821 ORTHO05D004449 4.9e-10 67.8 94 50.0
BolC7t45268H Brassica oleracea HOM05D003821 ORTHO05D004449 4.9e-10 67.8 85 52.9
CSS0027872 Camellia sinensis var. sinensis HOM05D003821 ORTHO05D004449 4.9e-10 67.8 100 48.0
Sabra08G0153500 Salix brachista HOM05D003821 ORTHO05D004449 4.9e-10 67.8 129 40.3
CANSAT78G0465 Cannabis sativa HOM05D003821 ORTHO05D004449 6.3e-10 67.4 99 46.5
Hund20554 Selenicereus undatus HOM05D003821 ORTHO05D004449 8.3e-10 67.0 117 39.3
FvH4_4g18020 Fragaria vesca HOM05D003821 ORTHO05D004449 1.4e-09 66.2 94 48.9
Prupe.1G136900 Prunus persica HOM05D003821 ORTHO05D004449 1.8e-09 65.9 86 50.0
C07p47410 Brassica napus HOM05D003821 ORTHO05D004449 2.4e-09 65.5 114 43.9
TWI79G0264 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 2.4e-09 65.5 78 48.7
Ciclev10007067m.g Citrus clementina HOM05D003821 ORTHO05D004449 3.1e-09 65.1 126 39.7
Nn4g25849 Nelumbo nucifera HOM05D003821 ORTHO05D004449 3.1e-09 65.1 89 47.2
RcHm_v2.0_Chr4g0422221 Rosa chinensis HOM05D003821 ORTHO05D004449 4.1e-09 64.7 44 77.3
Gohir.D08G138600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 9.2e-09 63.5 89 46.1
Os06g0274000 Oryza sativa ssp. japonica HOM05D003821 ORTHO05D004449 1.6e-08 62.8 86 53.5
Potri.010G025000 Populus trichocarpa HOM05D003821 ORTHO05D004449 2.7e-08 62.0 88 46.6
Aa31LG10G6300 Aethionema arabicum HOM05D003821 ORTHO05D004449 3.5e-08 61.6 127 39.4
unitig_32.g10644 Utricularia gibba HOM05D003821 ORTHO05D004449 3.5e-08 61.6 36 83.3
Medtr7g108610 Medicago truncatula HOM05D003821 ORTHO05D004449 4.5e-08 61.2 60 56.7
PGR031G0623 Punica granatum HOM05D003821 ORTHO05D004449 1.7e-07 59.3 88 47.7
Gorai.007G237400 Gossypium raimondii HOM05D003821 ORTHO05D004449 5.0e-07 57.8 85 51.8
CsaV3_7G029090 Cucumis sativus L. HOM05D003821 ORTHO05D004449 8.6e-07 57.0 87 43.7
Hma1.2p1_0209F.1_g088610 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 8.6e-07 57.0 47 63.8
Duzib133G0834 Durio zibethinus HOM05D003821 ORTHO05D004449 1.5e-06 56.2 88 39.8
Zm00001eb380410 Zea mays HOM05D003821 ORTHO05D004449 1.5e-06 56.2 74 50.0
Gohir.A08G117600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 3.3e-06 55.1 89 42.7
Gohir.D11G223400 Gossypium hirsutum HOM05D003821 ORTHO05D004449 4.3e-06 54.7 47 59.6
Manes.03G194900 Manihot esculenta HOM05D003821 ORTHO05D004449 5.6e-06 54.3 78 44.9
Potri.008G208100 Populus trichocarpa HOM05D003821 ORTHO05D004449 5.6e-06 54.3 88 42.0
unitig_748.g8733 Utricularia gibba HOM05D003821 ORTHO05D004449 7.3e-06 53.9 88 44.3
Glyma.03G213100 Glycine max HOM05D003821 ORTHO05D004449 9.5e-06 53.5 49 55.1


User provided reference genes

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