Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1830.3 Capsicum annuum HOM05D005432 ORTHO05D004599 1.3e-78 296.6 178 100.0
CAN.G1830.1 Capsicum annuum HOM05D005432 ORTHO05D004599 4.6e-52 208.4 181 65.7
PGSC0003DMG400002732 Solanum tuberosum HOM05D005432 ORTHO05D004599 3.0e-51 205.7 198 64.6
PGSC0003DMG400012977 Solanum tuberosum HOM05D005432 ORTHO05D004599 4.3e-50 201.8 180 63.9
Solyc09g008760.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 3.7e-49 198.7 197 63.5
PGSC0003DMG400012978 Solanum tuberosum HOM05D005432 ORTHO05D004599 4.8e-49 198.4 203 57.6
Solyc09g008750.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 5.3e-48 194.9 179 63.7
Sopen09g003540 Solanum pennellii HOM05D005432 ORTHO05D004599 1.2e-47 193.7 180 64.4
Sopen09g003550 Solanum pennellii HOM05D005432 ORTHO05D004599 3.8e-46 188.7 200 62.0
Nitab4.5_0008385g0020 Nicotiana tabacum HOM05D005432 ORTHO05D004599 9.3e-45 184.1 196 57.7
Sopen09g003530 Solanum pennellii HOM05D005432 ORTHO05D004599 3.5e-44 182.2 201 55.7
Nitab4.5_0000680g0130 Nicotiana tabacum HOM05D005432 ORTHO05D004599 6.0e-44 181.4 193 60.1
Nitab4.5_0000680g0150 Nicotiana tabacum HOM05D005432 ORTHO05D004599 6.0e-44 181.4 193 59.1
Solyc09g008740.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.0e-43 180.6 201 53.7
Nitab4.5_0008385g0010 Nicotiana tabacum HOM05D005432 ORTHO05D004599 1.8e-40 169.9 178 57.3
Peaxi162Scf00500g00034 Petunia axillaris HOM05D005432 ORTHO05D004599 5.3e-40 168.3 200 55.0
CAN.G1830.2 Capsicum annuum HOM05D005432 ORTHO05D004599 2.0e-39 166.4 250 51.6
Peaxi162Scf00449g00414 Petunia axillaris HOM05D005432 ORTHO05D004599 7.2e-21 104.8 187 43.9
PGSC0003DMG400003320 Solanum tuberosum HOM05D005432 ORTHO05D004599 3.3e-18 95.9 186 38.2
Sopen02g014700 Solanum pennellii HOM05D005432 ORTHO05D004599 7.4e-18 94.7 200 39.0
CAN.G775.5 Capsicum annuum HOM05D005432 ORTHO05D004599 1.8e-16 90.1 180 39.4
SalBow5G2133 Salvia bowleyana HOM05D005432 ORTHO05D004599 3.1e-16 89.4 175 37.7
DCAR_010807 Daucus carota HOM05D005432 ORTHO05D004599 3.4e-15 85.9 172 36.0
Gohir.D11G210200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 4.5e-15 85.5 170 34.7
Solyc02g064570.2 Solanum lycopersicum HOM05D005432 ORTHO05D004599 4.5e-15 85.5 190 37.4
Thecc.01G075000 Theobroma cacao HOM05D005432 ORTHO05D004599 6.5e-14 81.6 170 32.9
Gohir.A11G213000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.4e-13 80.5 170 32.9
Gohir.A12G078000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 2.5e-13 79.7 170 33.5
Potri.007G006200 Populus trichocarpa HOM05D005432 ORTHO05D004599 5.5e-13 78.6 179 33.5
Gorai.007G225500 Gossypium raimondii HOM05D005432 ORTHO05D004599 7.2e-13 78.2 170 32.9
Gohir.D12G076200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.2e-12 77.4 170 32.4
COL.COLO4_11602 Corchorus olitorius HOM05D005432 ORTHO05D004599 2.1e-12 76.6 170 31.2
Gorai.008G084600 Gossypium raimondii HOM05D005432 ORTHO05D004599 2.1e-12 76.6 170 32.4
Duzib187G0823 Durio zibethinus HOM05D005432 ORTHO05D004599 2.7e-12 76.3 171 35.1
QL06p039087 Quercus lobata HOM05D005432 ORTHO05D004599 3.6e-12 75.9 189 33.3
Migut.L00424 Erythranthe guttata HOM05D005432 ORTHO05D004599 6.1e-12 75.1 180 35.0
Sabra07G0004500 Salix brachista HOM05D005432 ORTHO05D004599 6.1e-12 75.1 173 33.5
Oeu011980.1 Olea europaea HOM05D005432 ORTHO05D004599 1.4e-11 73.9 167 36.5
TAR628G1364 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.4e-11 73.9 181 34.8
Sabra14G0006100 Salix brachista HOM05D005432 ORTHO05D004599 1.8e-11 73.6 182 33.0
TWI74G0597 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 6.7e-11 71.6 170 30.6
MD02G1188600 Malus domestica HOM05D005432 ORTHO05D004599 8.8e-11 71.2 173 31.8
TAR625G0570 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.1e-10 70.9 178 33.7
TWI77G0559 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 1.5e-10 70.5 170 31.2
FAN23G2070 Fragaria x ananassa HOM05D005432 ORTHO05D004599 2.0e-10 70.1 185 33.0
FAN26G1008 Fragaria x ananassa HOM05D005432 ORTHO05D004599 2.0e-10 70.1 185 33.0
FvH4_1g18020 Fragaria vesca HOM05D005432 ORTHO05D004599 2.6e-10 69.7 185 32.4
FAN19G1119 Fragaria x ananassa HOM05D005432 ORTHO05D004599 2.6e-10 69.7 185 32.4
Potri.014G006400 Populus trichocarpa HOM05D005432 ORTHO05D004599 2.6e-10 69.7 182 31.3
TAR381G0486 Trochodendron aralioides HOM05D005432 ORTHO05D004599 3.3e-10 69.3 185 32.4
PGR102G0812 Punica granatum HOM05D005432 ORTHO05D004599 5.7e-10 68.6 186 31.7
Manes.13G109800 Manihot esculenta HOM05D005432 ORTHO05D004599 1.3e-09 67.4 194 31.4
Migut.H00333 Erythranthe guttata HOM05D005432 ORTHO05D004599 1.7e-09 67.0 173 31.8
Actinidia11967 Actinidia chinensis HOM05D005432 ORTHO05D004599 2.2e-09 66.6 198 34.3
Dinv23035 Davidia involucrata HOM05D005432 ORTHO05D004599 4.8e-09 65.5 171 31.0
Manes.12G116300 Manihot esculenta HOM05D005432 ORTHO05D004599 4.8e-09 65.5 189 32.8
Migut.L00423 Erythranthe guttata HOM05D005432 ORTHO05D004599 6.3e-09 65.1 167 32.9
ECA232G3846 Erigeron canadensis HOM05D005432 ORTHO05D004599 8.2e-09 64.7 203 28.6
ECA232G3481 Erigeron canadensis HOM05D005432 ORTHO05D004599 1.1e-08 64.3 217 28.6
Duzib147G0737 Durio zibethinus HOM05D005432 ORTHO05D004599 1.4e-08 63.9 170 31.2
Duzib264G0647 Durio zibethinus HOM05D005432 ORTHO05D004599 1.8e-08 63.5 170 31.2
Lsat_1_v5_gn_4_160141 Lactuca sativa HOM05D005432 ORTHO05D004599 1.8e-08 63.5 204 27.9
RcHm_v2.0_Chr2g0108511 Rosa chinensis HOM05D005432 ORTHO05D004599 1.8e-08 63.5 180 31.1
Ciclev10026545m.g Citrus clementina HOM05D005432 ORTHO05D004599 2.4e-08 63.2 181 30.4
Rhsim10G0095100 Rhododendron simsii HOM05D005432 ORTHO05D004599 2.4e-08 63.2 44 65.9
ECA232G0649 Erigeron canadensis HOM05D005432 ORTHO05D004599 1.2e-07 60.8 192 31.2
Rhsim10G0095000 Rhododendron simsii HOM05D005432 ORTHO05D004599 1.6e-07 60.5 159 34.6
Atru.chr3.1044 Acer truncatum HOM05D005432 ORTHO05D004599 2.6e-07 59.7 171 29.2
CANSAT01G2351 Cannabis sativa HOM05D005432 ORTHO05D004599 3.5e-07 59.3 36 69.4
Ca_22097_v3 Cicer arietinum L. HOM05D005432 ORTHO05D004599 5.9e-07 58.5 35 68.6
Lj4g0003965 Lotus japonicus HOM05D005432 ORTHO05D004599 5.9e-07 58.5 36 69.4
SGA_v2.0_scaffold15G07481 Striga asiatica HOM05D005432 ORTHO05D004599 5.9e-07 58.5 181 30.4
Prupe.6G218300 Prunus persica HOM05D005432 ORTHO05D004599 1.0e-06 57.8 188 30.9
TPR.G24237 Trifolium pratense HOM05D005432 ORTHO05D004599 1.3e-06 57.4 35 71.4
CiPaw.01G002700 Carya illinoinensis HOM05D005432 ORTHO05D004599 2.9e-06 56.2 34 70.6
CsaV3_2G016320 Cucumis sativus L. HOM05D005432 ORTHO05D004599 3.8e-06 55.8 36 63.9
Lsat_1_v5_gn_4_160361 Lactuca sativa HOM05D005432 ORTHO05D004599 3.8e-06 55.8 173 33.5
VMungo0251G2573 Vigna mungo HOM05D005432 ORTHO05D004599 3.8e-06 55.8 36 66.7
MELO3C020843.2 Cucumis melo HOM05D005432 ORTHO05D004599 5.0e-06 55.5 36 66.7
Medtr4g097280 Medicago truncatula HOM05D005432 ORTHO05D004599 5.0e-06 55.5 35 68.6
Medtr4g097360 Medicago truncatula HOM05D005432 ORTHO05D004599 6.5e-06 55.1 35 68.6
Medtr4g097350 Medicago truncatula HOM05D005432 ORTHO05D004599 8.5e-06 54.7 35 68.6


User provided reference genes

Program Settings