Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1824.2 Capsicum annuum HOM05D005506 ORTHO05D004172 6.1e-64 247.3 122 100.0
CAN.G1235.4 Capsicum annuum HOM05D000638 ORTHO05D000801 3.7e-45 184.9 121 76.9
CAN.G1612.5 Capsicum annuum HOM05D005506 ORTHO05D004172 7.1e-44 180.6 121 78.5
CAN.G7.16 Capsicum annuum HOM05D005506 ORTHO05D004172 2.1e-40 169.1 121 68.6
CAN.G170.30 Capsicum annuum HOM05D011038 ORTHO05D004172 3.6e-40 168.3 121 71.1
CAN.G170.72 Capsicum annuum HOM05D000327 ORTHO05D000218 3.1e-39 165.2 121 71.1
CAN.G695.1 Capsicum annuum HOM05D005506 ORTHO05D004172 9.9e-38 160.2 110 72.7
CAN.G836.54 Capsicum annuum HOM05D005506 ORTHO05D004172 1.9e-36 156.0 110 72.7
CAN.G1251.8 Capsicum annuum HOM05D005506 ORTHO05D004172 1.2e-35 153.3 110 70.9
CAN.G2548.1 Capsicum annuum HOM05D005506 ORTHO05D004172 7.8e-35 150.6 110 69.1
CAN.G97.43 Capsicum annuum HOM05D005506 ORTHO05D004172 3.0e-34 148.7 93 78.5
PGSC0003DMG400036799 Solanum tuberosum HOM05D005506 ORTHO05D004172 7.3e-33 144.1 122 59.8
CAN.G513.5 Capsicum annuum HOM05D005506 ORTHO05D004172 1.4e-31 139.8 93 74.2
CAN.G806.9 Capsicum annuum HOM05D011038 ORTHO05D004172 1.7e-29 132.9 108 65.7
CAN.G243.35 Capsicum annuum HOM05D005506 ORTHO05D004172 2.9e-29 132.1 94 68.1
CAN.G700.37 Capsicum annuum HOM05D011038 ORTHO05D004172 8.4e-29 130.6 107 63.6
CAN.G22.18 Capsicum annuum HOM05D005506 ORTHO05D004172 1.1e-28 130.2 122 56.6
CAN.G801.2 Capsicum annuum HOM05D005506 ORTHO05D004172 1.1e-28 130.2 117 58.1
CAN.G755.2 Capsicum annuum HOM05D005506 ORTHO05D004172 4.2e-28 128.3 95 69.5
CAN.G65.25 Capsicum annuum HOM05D005506 ORTHO05D004172 1.2e-27 126.7 117 53.8
CAN.G1177.2 Capsicum annuum HOM05D005506 ORTHO05D004172 1.6e-27 126.3 121 55.4
CAN.G194.25 Capsicum annuum HOM05D005506 ORTHO05D004172 3.5e-27 125.2 122 53.3
CAN.G1056.16 Capsicum annuum HOM05D005506 ORTHO05D004172 1.0e-26 123.6 121 55.4
CAN.G371.20 Capsicum annuum HOM05D005506 ORTHO05D004172 3.0e-26 122.1 122 51.6
CAN.G126.52 Capsicum annuum HOM05D005506 ORTHO05D004172 1.1e-25 120.2 121 50.4
CAN.G1937.1 Capsicum annuum HOM05D005506 ORTHO05D004172 1.5e-25 119.8 121 50.4
CAN.G129.2 Capsicum annuum HOM05D005506 ORTHO05D004172 1.9e-25 119.4 121 52.1
CAN.G513.3 Capsicum annuum HOM05D005506 ORTHO05D004172 1.6e-24 116.3 122 50.8
CAN.G134.131 Capsicum annuum HOM05D005506 ORTHO05D004172 1.4e-23 113.2 79 69.6
CAN.G164.13 Capsicum annuum HOM05D005506 ORTHO05D004172 5.8e-22 107.8 117 50.4
CAN.G342.9 Capsicum annuum HOM05D005506 ORTHO05D004172 6.4e-21 104.4 118 49.2
CAN.G92.27 Capsicum annuum HOM05D005506 ORTHO05D004172 6.4e-21 104.4 121 47.1
PGSC0003DMG400037500 Solanum tuberosum HOM05D005506 ORTHO05D004172 2.4e-20 102.4 95 55.8
CAN.G101.1 Capsicum annuum HOM05D005506 ORTHO05D004172 4.2e-20 101.7 121 48.8
CAN.G1038.18 Capsicum annuum HOM05D005506 ORTHO05D004172 5.4e-20 101.3 108 49.1
CAN.G66.2 Capsicum annuum HOM05D005506 ORTHO05D004172 7.1e-20 100.9 108 48.1
CAN.G248.41 Capsicum annuum HOM05D005506 ORTHO05D004172 2.7e-19 99.0 75 65.3
CAN.G520.8 Capsicum annuum HOM05D005506 ORTHO05D004172 2.7e-19 99.0 121 47.1
CAN.G123.4 Capsicum annuum HOM05D005506 ORTHO05D004172 7.9e-19 97.4 108 49.1
CAN.G797.11 Capsicum annuum HOM05D005506 ORTHO05D004172 3.0e-18 95.5 59 78.0
CAN.G1669.5 Capsicum annuum HOM05D002496 ORTHO05D002787 5.1e-18 94.7 101 49.5
CAN.G1799.8 Capsicum annuum HOM05D005506 ORTHO05D004172 5.1e-18 94.7 94 53.2
CAN.G716.2 Capsicum annuum HOM05D005506 ORTHO05D004172 1.1e-17 93.6 93 52.7
CAN.G298.30 Capsicum annuum HOM05D005506 ORTHO05D004172 4.3e-17 91.7 83 56.6
CAN.G1437.3 Capsicum annuum HOM05D005506 ORTHO05D004172 1.6e-16 89.7 84 54.8
CAN.G989.1 Capsicum annuum HOM05D005506 ORTHO05D004172 8.1e-16 87.4 60 75.0
Sopen06g004040 Solanum pennellii HOM05D011490 ORTHO05D004172 1.4e-15 86.7 121 40.5
Sopen09g013570 Solanum pennellii HOM05D000017 ORTHO05D004172 6.9e-15 84.3 121 40.5
CAN.G156.11 Capsicum annuum HOM05D005506 ORTHO05D004172 5.8e-14 81.3 91 45.1
Sopen09g015940 Solanum pennellii HOM05D005506 ORTHO05D004172 7.6e-14 80.9 121 37.2
CAN.G755.6 Capsicum annuum HOM05D005506 ORTHO05D004172 1.3e-13 80.1 78 52.6
CAN.G1308.1 Capsicum annuum HOM05D005506 ORTHO05D004172 2.9e-13 79.0 95 46.3
PGSC0003DMG401009023 Solanum tuberosum HOM05D000017 ORTHO05D000013 3.8e-13 78.6 121 36.4
CAN.G767.51 Capsicum annuum HOM05D005506 ORTHO05D004172 8.4e-13 77.4 67 56.7
CAN.G1214.10 Capsicum annuum HOM05D005506 ORTHO05D004172 1.1e-12 77.0 73 56.2
CAN.G1127.3 Capsicum annuum HOM05D001217 ORTHO05D004172 1.4e-12 76.6 121 41.3
PGSC0003DMG400038069 Solanum tuberosum HOM05D000017 ORTHO05D004172 7.1e-12 74.3 121 37.2
CAN.G954.3 Capsicum annuum HOM05D005506 ORTHO05D004172 6.0e-11 71.2 61 55.7
CANSAT56G3039 Cannabis sativa HOM05D000017 ORTHO05D000013 7.9e-11 70.9 117 35.9
Nitab4.5_0001063g0060 Nicotiana tabacum HOM05D005506 ORTHO05D004172 2.3e-10 69.3 116 33.6
CAN.G1014.53 Capsicum annuum HOM05D000261 ORTHO05D004172 1.1e-09 67.0 121 37.2
Atru.chr9.269 Acer truncatum HOM05D000017 ORTHO05D000013 3.3e-09 65.5 118 32.2
CANSAT11G1978 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-09 65.5 109 33.9
CANSAT56G0827 Cannabis sativa HOM05D000017 ORTHO05D000013 4.3e-09 65.1 118 33.1
Oeu058708.1 Olea europaea HOM05D000017 ORTHO05D000013 4.3e-09 65.1 118 33.1
Sopen08g006280 Solanum pennellii HOM05D000017 ORTHO05D004172 5.6e-09 64.7 100 38.0
TAR651G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 5.6e-09 64.7 121 29.8
Atru.chr1.2128 Acer truncatum HOM05D000017 ORTHO05D000013 9.6e-09 63.9 118 36.4
Atru.chr3.3659 Acer truncatum HOM05D000017 ORTHO05D000013 9.6e-09 63.9 118 35.6
Atru.chr1.1594 Acer truncatum HOM05D000017 ORTHO05D000013 1.3e-08 63.5 119 32.8
Atru.chr1.3548 Acer truncatum HOM05D000017 ORTHO05D000013 1.6e-08 63.2 118 31.4
Atru.chr9.32 Acer truncatum HOM05D000017 ORTHO05D000013 1.6e-08 63.2 118 31.4
Sopen02g009890 Solanum pennellii HOM05D005506 ORTHO05D004172 1.6e-08 63.2 52 55.8
CANSAT21G0624 Cannabis sativa HOM05D000017 ORTHO05D000013 2.1e-08 62.8 116 34.5
Oeu008255.1 Olea europaea HOM05D000017 ORTHO05D000013 2.1e-08 62.8 120 33.3
CAN.G78.32 Capsicum annuum HOM05D005506 ORTHO05D004172 2.8e-08 62.4 60 51.7
MBI16_g32381_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 2.8e-08 62.4 116 29.3
TAR059G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 4.8e-08 61.6 117 33.3
Oeu059292.1 Olea europaea HOM05D000017 ORTHO05D000013 6.2e-08 61.2 120 32.5
Oeu010760.1 Olea europaea HOM05D000017 ORTHO05D000013 8.1e-08 60.8 123 37.4
Oeu041491.1 Olea europaea HOM05D000017 ORTHO05D000013 8.1e-08 60.8 118 32.2
Oeu057223.1 Olea europaea HOM05D000017 ORTHO05D000013 8.1e-08 60.8 120 32.5
CAN.G153.9 Capsicum annuum HOM05D005506 ORTHO05D004172 1.1e-07 60.5 122 33.6
Oeu009394.1 Olea europaea HOM05D000017 ORTHO05D000013 1.4e-07 60.1 126 30.2
MBI01_g04524_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 1.8e-07 59.7 116 29.3
Oeu033116.1 Olea europaea HOM05D000017 ORTHO05D000013 1.8e-07 59.7 118 31.4
TAR118G0002 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.8e-07 59.7 117 32.5
TAR286G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.8e-07 59.7 117 32.5
TAR445G0003 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.8e-07 59.7 117 32.5
TAR640G0005 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.8e-07 59.7 117 32.5
Atru.chr9.234 Acer truncatum HOM05D000017 ORTHO05D000013 2.4e-07 59.3 118 31.4
CAN.G669.3 Capsicum annuum HOM05D005506 ORTHO05D004172 2.4e-07 59.3 60 55.0
THA.LOC104809156 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.1e-07 58.9 116 31.0
Oeu005507.1 Olea europaea HOM05D000017 ORTHO05D000013 4.0e-07 58.5 126 29.4
Oeu044755.1 Olea europaea HOM05D000017 ORTHO05D000013 4.0e-07 58.5 120 32.5
TWI12G1375 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.3e-07 58.2 121 30.6
TWI18G0182 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.3e-07 58.2 121 29.8
TWI38G2350 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.3e-07 58.2 121 30.6
TWI53G1455 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.3e-07 58.2 121 30.6
Atru.chr4.194 Acer truncatum HOM05D000017 ORTHO05D000013 6.9e-07 57.8 118 28.8
Oeu007458.1 Olea europaea HOM05D000017 ORTHO05D000013 6.9e-07 57.8 120 32.5
THA.LOC104809906 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 9.0e-07 57.4 119 34.5
Oeu009175.1 Olea europaea HOM05D000017 ORTHO05D000013 1.2e-06 57.0 126 31.0
Oeu062688.1 Olea europaea HOM05D000017 ORTHO05D000013 1.2e-06 57.0 126 30.2
THA.LOC104825417 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.2e-06 57.0 120 32.5
MBI15_g06456_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 1.5e-06 56.6 116 30.2
Oeu028795.1 Olea europaea HOM05D000017 ORTHO05D000013 1.5e-06 56.6 126 31.0
THA.LOC104824926 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.5e-06 56.6 122 31.1
C06p10560 Brassica napus HOM05D000017 ORTHO05D000013 2.0e-06 56.2 117 31.6
PSO210G1360 Papaver somniferum HOM05D000017 ORTHO05D000013 2.6e-06 55.8 121 27.3
Sopen11g011170 Solanum pennellii HOM05D011490 ORTHO05D004172 2.6e-06 55.8 102 36.3
TWI14G0779 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.4e-06 55.5 121 30.6
A04p22200 Brassica napus HOM05D000017 ORTHO05D000013 4.5e-06 55.1 117 30.8
C03p31490 Brassica napus HOM05D000017 ORTHO05D000013 4.5e-06 55.1 116 31.0
MBI16_g35342_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 4.5e-06 55.1 116 27.6
TWI18G0050 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.5e-06 55.1 122 29.5
TWI18G0395 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.5e-06 55.1 116 30.2
TWI53G1435 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.5e-06 55.1 116 31.9
TWI77G0713 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.5e-06 55.1 116 30.2
Atru.chr2.3130 Acer truncatum HOM05D000017 ORTHO05D000013 5.8e-06 54.7 118 28.8
BolC3t15495H Brassica oleracea HOM05D000017 ORTHO05D000013 5.8e-06 54.7 116 31.0
BraA06t26007Z Brassica rapa HOM05D000017 ORTHO05D000013 5.8e-06 54.7 117 31.6
CANSAT56G3678 Cannabis sativa HOM05D000017 ORTHO05D000013 5.8e-06 54.7 115 29.6
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 5.8e-06 54.7 120 31.7
FvH4_3g29511 Fragaria vesca HOM05D000017 ORTHO05D000013 5.8e-06 54.7 120 28.3
Atru.chr1.3834 Acer truncatum HOM05D000017 ORTHO05D000013 7.6e-06 54.3 118 28.8
Oeu021079.1 Olea europaea HOM05D000017 ORTHO05D000013 7.6e-06 54.3 120 29.2
PSO761G0585 Papaver somniferum HOM05D000017 ORTHO05D000013 7.6e-06 54.3 121 25.6
Atru.chr13.2137 Acer truncatum HOM05D000017 ORTHO05D000013 1.0e-05 53.9 118 26.3
THA.LOC104800036 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.0e-05 53.9 125 32.0


User provided reference genes

Program Settings