Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 1.8e-41 172.2 89 100.0
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 1.1e-33 146.4 88 81.8
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 2.4e-33 145.2 86 86.0
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 1.6e-32 142.5 86 84.9
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 2.0e-32 142.1 87 81.6
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 3.5e-32 141.4 88 78.4
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 4.5e-32 141.0 87 79.3
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 4.5e-32 141.0 86 82.6
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 5.9e-32 140.6 87 80.5
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 5.9e-32 140.6 87 81.6
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 7.7e-32 140.2 85 80.0
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 7.7e-32 140.2 86 82.6
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 1.3e-31 139.4 87 80.5
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 1.3e-31 139.4 88 78.4
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 1.7e-31 139.0 86 81.4
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 2.9e-31 138.3 87 79.3
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 2.9e-31 138.3 87 77.0
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 3.8e-31 137.9 87 77.0
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 5.0e-31 137.5 85 81.2
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 5.0e-31 137.5 87 79.3
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 6.5e-31 137.1 87 75.9
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 8.5e-31 136.7 87 75.9
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 8.5e-31 136.7 85 80.0
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 8.5e-31 136.7 85 80.0
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 8.5e-31 136.7 85 80.0
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 1.5e-30 136.0 83 79.5
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 1.5e-30 136.0 87 78.2
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 1.9e-30 135.6 80 83.8
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 3.2e-30 134.8 82 81.7
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 3.2e-30 134.8 87 73.6
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 4.2e-30 134.4 87 79.3
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 4.2e-30 134.4 87 75.9
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 5.5e-30 134.0 87 78.2
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 9.4e-30 133.3 87 74.7
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 2.1e-29 132.1 80 81.2
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 2.1e-29 132.1 80 81.2
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 2.1e-29 132.1 87 71.3
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 3.6e-29 131.3 87 75.9
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 4.7e-29 131.0 87 74.7
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 4.7e-29 131.0 87 72.4
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 6.1e-29 130.6 87 71.3
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 8.0e-29 130.2 88 76.1
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 8.0e-29 130.2 88 76.1
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 8.0e-29 130.2 88 76.1
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 8.0e-29 130.2 87 72.4
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 1.0e-28 129.8 88 76.1
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.4e-28 129.4 87 73.6
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.4e-28 129.4 87 73.6
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 1.4e-28 129.4 79 79.7
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 2.3e-28 128.6 83 77.1
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 2.3e-28 128.6 83 77.1
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 2.3e-28 128.6 88 75.0
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 2.3e-28 128.6 90 73.3
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 2.3e-28 128.6 82 78.0
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 2.3e-28 128.6 88 75.0
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 3.0e-28 128.3 88 75.0
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 4.0e-28 127.9 88 75.0
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 4.0e-28 127.9 82 76.8
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 4.0e-28 127.9 82 76.8
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 4.0e-28 127.9 84 72.6
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 5.2e-28 127.5 88 75.0
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 1.2e-27 126.3 88 73.9
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 1.2e-27 126.3 87 72.4
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 2.6e-27 125.2 80 77.5
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 1.7e-26 122.5 87 69.0
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 1.7e-26 122.5 83 72.3
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 2.8e-26 121.7 81 74.1
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 4.8e-26 120.9 88 70.5
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 6.3e-26 120.6 77 77.9
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.4e-25 118.6 73 80.8
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 3.1e-25 118.2 85 69.4
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 2.0e-24 115.5 85 68.2
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 4.5e-24 114.4 69 82.6
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 4.5e-24 114.4 88 67.0
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 1.7e-23 112.5 88 65.9
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 2.9e-23 111.7 83 66.3
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 2.9e-23 111.7 70 77.1
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 6.5e-23 110.5 80 68.8
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 8.5e-23 110.2 72 70.8
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 8.5e-23 110.2 86 66.3
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.1e-22 109.8 69 79.7
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 1.5e-22 109.4 70 75.7
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 1.9e-22 109.0 72 72.2
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 4.2e-22 107.8 86 61.6
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 4.2e-22 107.8 87 60.9
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 4.7e-21 104.4 87 59.8
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 1.8e-20 102.4 80 67.5
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 2.3e-20 102.1 80 68.8
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 6.8e-20 100.5 82 65.9
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 1.5e-19 99.4 62 87.1
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 3.4e-19 98.2 74 71.6
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 5.7e-19 97.4 83 65.1
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 9.8e-19 96.7 76 68.4
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 1.3e-18 96.3 62 77.4
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 1.3e-18 96.3 74 66.2
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 1.7e-18 95.9 60 76.7
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 2.2e-18 95.5 82 59.8
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 3.7e-18 94.7 83 65.1
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 6.3e-18 94.0 60 78.3
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 8.3e-18 93.6 55 83.6
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 9.5e-14 80.1 54 66.7
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 8.0e-13 77.0 51 70.6
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 2.3e-12 75.5 92 52.2
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 5.2e-12 74.3 83 49.4
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 8.9e-12 73.6 70 54.3
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 3.7e-10 68.2 57 63.2
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 4.1e-09 64.7 87 49.4
TAR369G0162 Trochodendron aralioides HOM05D002795 ORTHO05D000638 2.3e-07 58.9 38 71.1
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 6.6e-07 57.4 79 43.0


User provided reference genes

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