Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1811.1 Capsicum annuum HOM05D003399 ORTHO05D003393 1.4e-140 503.1 284 100.0
Solyc01g009720.2 Solanum lycopersicum HOM05D003399 ORTHO05D003393 2.4e-87 326.2 298 74.5
Sopen01g005220 Solanum pennellii HOM05D003399 ORTHO05D003393 3.2e-87 325.9 299 74.9
PGSC0003DMG400030004 Solanum tuberosum HOM05D003399 ORTHO05D003393 7.1e-71 271.6 259 73.0
Nitab4.5_0014700g0010 Nicotiana tabacum HOM05D003399 ORTHO05D003393 3.9e-53 212.6 297 54.2
Peaxi162Scf00234g01011 Petunia axillaris HOM05D003399 ORTHO05D003393 1.5e-49 200.7 295 50.8
Nitab4.5_0009065g0010 Nicotiana tabacum HOM05D003399 ORTHO05D003393 4.5e-49 199.1 292 54.5
Peaxi162Scf00128g01764 Petunia axillaris HOM05D003399 ORTHO05D003393 4.5e-33 146.0 293 44.4
Cfa009429 Carpinus fangiana HOM05D003399 ORTHO05D003393 4.6e-30 136.0 271 39.5
Potri.003G164800 Populus trichocarpa HOM05D003399 ORTHO05D003393 7.9e-30 135.2 277 39.7
Potri.001G062700 Populus trichocarpa HOM05D003399 ORTHO05D003393 3.0e-29 133.3 314 37.6
Manes.08G102600 Manihot esculenta HOM05D003399 ORTHO05D003393 5.1e-29 132.5 270 41.9
Oeu019432.1 Olea europaea HOM05D003399 ORTHO05D003393 1.9e-28 130.6 259 40.2
Sabra03G0119900 Salix brachista HOM05D003399 ORTHO05D003393 2.5e-28 130.2 304 38.5
Haze_12480 Corylus avellana HOM05D003399 ORTHO05D003393 3.7e-27 126.3 274 37.6
Thecc.02G195400 Theobroma cacao HOM05D003399 ORTHO05D003393 4.8e-27 125.9 293 38.6
Duzib248G1620 Durio zibethinus HOM05D003399 ORTHO05D003393 1.1e-26 124.8 298 38.3
CiPaw.05G103400 Carya illinoinensis HOM05D003399 ORTHO05D003393 4.5e-25 119.4 267 38.6
RcHm_v2.0_Chr4g0429231 Rosa chinensis HOM05D003399 ORTHO05D003393 2.9e-24 116.7 300 35.0
Manes.09G186300 Manihot esculenta HOM05D003399 ORTHO05D003393 5.0e-24 115.9 264 38.3
Duzib052G0315 Durio zibethinus HOM05D003399 ORTHO05D003393 6.5e-24 115.5 294 37.8
QL03p050027 Quercus lobata HOM05D003399 ORTHO05D003393 1.1e-23 114.8 284 37.3
Ciclev10033818m.g Citrus clementina HOM05D003399 ORTHO05D003393 2.5e-23 113.6 302 38.4
Oeu003275.1 Olea europaea HOM05D003399 ORTHO05D003393 7.2e-23 112.1 257 35.4
Actinidia22126 Actinidia chinensis HOM05D003399 ORTHO05D003393 4.6e-22 109.4 235 39.1
CiPaw.06G108000 Carya illinoinensis HOM05D003399 ORTHO05D003393 4.6e-22 109.4 263 35.4
Gohir.D12G144800 Gossypium hirsutum HOM05D003399 ORTHO05D003393 6.1e-22 109.0 283 37.1
Gohir.A04G101200 Gossypium hirsutum HOM05D003399 ORTHO05D003393 7.9e-22 108.6 256 39.1
MD13G1127900 Malus domestica HOM05D003399 ORTHO05D003393 7.9e-22 108.6 293 35.5
COL.COLO4_07618 Corchorus olitorius HOM05D003399 ORTHO05D003393 1.4e-21 107.8 282 36.9
FAN17G2315 Fragaria x ananassa HOM05D003399 ORTHO05D003393 1.4e-21 107.8 292 32.9
Gohir.A12G140200 Gossypium hirsutum HOM05D003399 ORTHO05D003393 1.4e-21 107.8 282 36.5
Gohir.D04G140300 Gossypium hirsutum HOM05D003399 ORTHO05D003393 1.4e-21 107.8 256 38.3
Oeu055475.1 Olea europaea HOM05D003399 ORTHO05D003393 1.4e-21 107.8 246 36.6
Prupe.1G218100 Prunus persica HOM05D003399 ORTHO05D003393 1.4e-21 107.8 334 31.7
Aqoxy3G01823 Aquilegia oxysepala HOM05D003399 ORTHO05D003393 1.8e-21 107.5 258 36.0
Gorai.012G125300 Gossypium raimondii HOM05D003399 ORTHO05D003393 3.0e-21 106.7 256 38.3
MD16G1128300 Malus domestica HOM05D003399 ORTHO05D003393 3.0e-21 106.7 312 34.6
Duzib132G1194 Durio zibethinus HOM05D003399 ORTHO05D003393 5.1e-21 105.9 286 36.4
Rhsim12G0018700 Rhododendron simsii HOM05D003399 ORTHO05D003393 5.1e-21 105.9 243 38.3
MSTRG.465 Avicennia marina HOM05D003399 ORTHO05D003393 6.7e-21 105.5 281 36.3
TAR374G0208 Trochodendron aralioides HOM05D003399 ORTHO05D003393 6.7e-21 105.5 253 35.6
Dinv12132 Davidia involucrata HOM05D003399 ORTHO05D003393 8.8e-21 105.1 302 35.8
Eucgr.G01956 Eucalyptus grandis HOM05D003399 ORTHO05D003393 1.1e-20 104.8 262 36.3
Gorai.005G196300 Gossypium raimondii HOM05D003399 ORTHO05D003393 3.7e-19 99.8 278 35.6
Oeu044505.1 Olea europaea HOM05D003399 ORTHO05D003393 1.1e-18 98.2 264 37.5
Gorai.008G156200 Gossypium raimondii HOM05D003399 ORTHO05D003393 1.8e-18 97.4 290 36.6
TWI75G1177 Tripterygium wilfordii HOM05D003399 ORTHO05D003393 4.1e-18 96.3 194 37.1
GSVIVG01000970001 Vitis vinifera HOM05D003399 ORTHO05D003393 4.1e-18 96.3 299 37.1
Gohir.D02G174700 Gossypium hirsutum HOM05D003399 ORTHO05D003393 5.3e-18 95.9 278 35.3
TAR622G1322 Trochodendron aralioides HOM05D003399 ORTHO05D003393 5.3e-18 95.9 252 38.5
Gohir.A03G151600 Gossypium hirsutum HOM05D003399 ORTHO05D003393 9.1e-18 95.1 280 35.4
TAR629G1336 Trochodendron aralioides HOM05D003399 ORTHO05D003393 9.1e-18 95.1 228 34.2
Actinidia30598 Actinidia chinensis HOM05D003399 ORTHO05D003393 3.4e-17 93.2 234 37.6
Lj6P836T14 Lonicera japonica HOM05D003399 ORTHO05D003393 1.3e-16 91.3 255 35.7
FvH4_4g22950 Fragaria vesca HOM05D003399 ORTHO05D003393 3.8e-16 89.7 303 30.7
CSS0040305 Camellia sinensis var. sinensis HOM05D003399 ORTHO05D006018 5.0e-16 89.4 284 32.4
FAN12G0769 Fragaria x ananassa HOM05D003399 ORTHO05D003393 6.5e-16 89.0 305 30.5
Atru.chr11.2413 Acer truncatum HOM05D003399 ORTHO05D003393 7.2e-15 85.5 168 38.7
TWI18G1150 Tripterygium wilfordii HOM05D003399 ORTHO05D003393 1.2e-14 84.7 191 36.6
FAN07G1125 Fragaria x ananassa HOM05D003399 ORTHO05D003393 1.6e-14 84.3 334 30.2
PGR119G0713 Punica granatum HOM05D003399 ORTHO05D003393 6.1e-14 82.4 217 33.6
TWI36G0503 Tripterygium wilfordii HOM05D003399 ORTHO05D003393 7.9e-14 82.0 263 36.5
Cpa.g.sc207.7 Carica papaya HOM05D003399 ORTHO05D003393 8.8e-13 78.6 282 36.5
MELO3C017803.2 Cucumis melo HOM05D003399 ORTHO05D003393 4.4e-12 76.3 250 31.6
Lsat_1_v5_gn_4_1321 Lactuca sativa HOM05D003399 ORTHO05D003393 1.3e-11 74.7 266 31.2
Eucgr.B03547 Eucalyptus grandis HOM05D003399 ORTHO05D003393 4.8e-11 72.8 232 34.1
ClCG07G011810 Citrullus lanatus HOM05D003399 ORTHO05D003393 1.4e-10 71.2 258 32.2
Migut.K01039 Erythranthe guttata HOM05D003399 ORTHO05D003393 1.4e-10 71.2 197 36.0
CANSAT01G0203 Cannabis sativa HOM05D003399 ORTHO05D003393 4.1e-10 69.7 231 29.4
Nn3g16314 Nelumbo nucifera HOM05D003399 ORTHO05D003393 4.1e-10 69.7 243 30.5
SalBow7G1980 Salvia bowleyana HOM05D003399 ORTHO05D003393 2.0e-09 67.4 99 43.4
Cc11_g17500 Coffea canephora HOM05D003399 ORTHO05D003393 2.6e-09 67.0 112 38.4
ClCG06G001790 Citrullus lanatus HOM05D003399 ORTHO05D003393 3.5e-09 66.6 192 32.8
PSO478G0797 Papaver somniferum HOM05D003399 ORTHO05D003393 3.5e-09 66.6 309 27.2
Lalb_Chr04g0258081 Lupinus albus HOM05D003399 ORTHO05D003393 4.5e-09 66.2 303 29.0
Medtr7g021270 Medicago truncatula HOM05D003399 ORTHO05D003393 5.9e-09 65.9 217 29.0
PSO017G5218 Papaver somniferum HOM05D003399 ORTHO05D003393 7.7e-09 65.5 279 27.6
Sed0004087 Sechium edule HOM05D003399 ORTHO05D003393 6.5e-08 62.4 247 30.4
Lalb_Chr10g0092161 Lupinus albus HOM05D003399 ORTHO05D003393 8.5e-08 62.0 230 28.3
MBI07_g40352_MAGBIO Magnolia biondii HOM05D003399 ORTHO05D003393 8.5e-08 62.0 258 33.3
MELO3C022349.2 Cucumis melo HOM05D003399 ORTHO05D003393 3.2e-07 60.1 193 30.6
HanXRQChr12g0362291 Helianthus annuus HOM05D003399 ORTHO05D003393 5.5e-07 59.3 260 25.4
PSO017G1762 Papaver somniferum HOM05D003399 ORTHO05D003393 5.5e-07 59.3 233 33.9
Lj1g0015103 Lotus japonicus HOM05D003399 ORTHO05D003393 1.6e-06 57.8 236 28.4
VMungo1383G2170 Vigna mungo HOM05D003399 ORTHO05D003393 1.6e-06 57.8 294 33.3
CsaV3_6G007830 Cucumis sativus L. HOM05D003399 ORTHO05D003393 2.1e-06 57.4 100 42.0
THA.LOC104807363 Tarenaya hassleriana HOM05D003399 ORTHO05D003393 2.1e-06 57.4 96 38.5
AUR62028859 Chenopodium quinoa HOM05D003399 ORTHO05D003393 6.1e-06 55.8 193 29.5
Thhalv10015692m.g Eutrema salsugineum HOM05D003399 ORTHO05D003393 8.0e-06 55.5 119 37.8
Sp6g30740 Schrenkiella parvula HOM05D003399 ORTHO05D003393 8.0e-06 55.5 119 35.3


User provided reference genes

Program Settings