Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G181.45 Capsicum annuum HOM05D002907 ORTHO05D005554 1.6e-103 379.4 192 100.0
CAN.G665.23 Capsicum annuum HOM05D002907 ORTHO05D005554 8.5e-60 234.2 168 75.6
CAN.G542.9 Capsicum annuum HOM05D002907 ORTHO05D005554 1.5e-56 223.4 135 87.4
CAN.G1597.6 Capsicum annuum HOM05D002907 ORTHO05D005554 6.9e-54 214.5 129 86.0
Solyc02g055537.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.7e-47 192.2 176 58.0
Nitab4.5_0002548g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.9e-43 179.9 173 57.8
CAN.G509.9 Capsicum annuum HOM05D002907 ORTHO05D005554 2.7e-42 176.0 108 80.6
CAN.G419.22 Capsicum annuum HOM05D002907 ORTHO05D005554 4.7e-42 175.3 102 86.3
Nitab4.5_0000011g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 8.0e-42 174.5 167 55.1
CAN.G1160.4 Capsicum annuum HOM05D002907 ORTHO05D005554 1.0e-41 174.1 110 78.2
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 1.5e-40 170.2 144 61.8
CAN.G1243.6 Capsicum annuum HOM05D002907 ORTHO05D005554 4.4e-40 168.7 98 83.7
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 6.5e-36 154.8 145 56.6
Peaxi162Scf00203g01424 Petunia axillaris HOM05D002907 ORTHO05D005554 8.0e-34 147.9 184 48.9
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 3.0e-33 146.0 184 48.9
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 3.0e-33 146.0 173 50.3
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 3.0e-33 146.0 173 50.3
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 3.0e-33 146.0 173 50.3
Sopen02g003400 Solanum pennellii HOM05D002907 ORTHO05D005554 4.0e-33 145.6 112 66.1
Nitab4.5_0002746g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.6e-32 142.9 178 48.3
CAN.G98.12 Capsicum annuum HOM05D002907 ORTHO05D005554 1.7e-31 140.2 79 84.8
Nitab4.5_0000162g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.8e-31 139.4 100 71.0
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.4e-30 137.1 106 64.2
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 3.1e-30 136.0 173 46.2
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 1.2e-29 134.0 173 46.2
Peaxi162Scf00816g00411 Petunia axillaris HOM05D002907 ORTHO05D005554 2.0e-29 133.3 181 47.5
Sopen01g012720 Solanum pennellii HOM05D002907 ORTHO05D005554 7.7e-29 131.3 181 45.9
Solyc06g011610.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.7e-28 130.2 103 64.1
Nitab4.5_0026714g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.1e-27 127.5 141 51.8
Nitab4.5_0000248g0100 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.5e-27 126.3 97 64.9
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 1.2e-26 124.0 168 48.2
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.2e-26 124.0 173 43.9
PGSC0003DMG400044579 Solanum tuberosum HOM05D002907 ORTHO05D005554 1.2e-26 124.0 165 44.8
CAN.G1418.2 Capsicum annuum HOM05D002907 ORTHO05D005554 6.1e-26 121.7 75 78.7
Peaxi162Scf00431g00511 Petunia axillaris HOM05D002907 ORTHO05D005554 1.0e-25 120.9 94 64.9
Nitab4.5_0000488g0170 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.4e-25 120.6 186 42.5
Nitab4.5_0000164g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.0e-24 116.7 167 44.3
CAN.G1342.3 Capsicum annuum HOM05D001433 ORTHO05D005554 1.1e-22 110.9 78 78.2
Nitab4.5_0009770g0040 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.4e-22 110.5 80 70.0
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 3.1e-22 109.4 103 54.4
CANSAT01G2740 Cannabis sativa HOM05D002907 ORTHO05D005554 5.4e-22 108.6 98 55.1
CANSAT01G3093 Cannabis sativa HOM05D002907 ORTHO05D005554 5.4e-22 108.6 99 55.6
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 4.5e-21 105.5 170 42.9
CANSAT56G4249 Cannabis sativa HOM05D002907 ORTHO05D005554 5.9e-21 105.1 98 54.1
Nitab4.5_0000037g0130 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.9e-21 105.1 139 46.0
Nitab4.5_0000745g0100 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.5e-19 99.8 86 60.5
CAN.G529.44 Capsicum annuum HOM05D000493 ORTHO05D001638 2.8e-18 96.3 70 77.1
DCAR_027158 Daucus carota HOM05D002907 ORTHO05D005554 2.8e-18 96.3 99 50.5
Nitab4.5_0000037g0150 Nicotiana tabacum HOM05D002907 ORTHO05D005554 8.0e-18 94.7 76 64.5
Peaxi162Scf00871g00034 Petunia axillaris HOM05D002907 ORTHO05D005554 2.6e-16 89.7 173 37.6
Solyc12g038200.3 Solanum lycopersicum HOM05D002700 ORTHO05D003228 2.6e-16 89.7 61 68.9
Nitab4.5_0008853g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.1e-14 82.8 76 57.9
DCAR_010335 Daucus carota HOM05D002907 ORTHO05D005554 1.2e-13 80.9 139 37.4
DCAR_024022 Daucus carota HOM05D002907 ORTHO05D005554 1.2e-13 80.9 89 47.2
DCAR_030301 Daucus carota HOM05D002907 ORTHO05D005554 2.7e-13 79.7 119 42.9
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 1.0e-12 77.8 159 35.8
Nitab4.5_0002746g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.0e-12 75.5 100 46.0
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 3.3e-11 72.8 140 33.6
QL01p044581 Quercus lobata HOM05D002907 ORTHO05D005554 4.3e-11 72.4 107 40.2
QL01p044591 Quercus lobata HOM05D002907 ORTHO05D005554 4.3e-11 72.4 107 40.2
QL93p0100_0313 Quercus lobata HOM05D000038 ORTHO05D000612 4.3e-11 72.4 107 38.3
Solyc11g044605.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.2e-10 70.9 77 49.4
QL93p0160_0004 Quercus lobata HOM05D002907 ORTHO05D000065 1.6e-10 70.5 84 42.9
QL04p076347 Quercus lobata HOM05D002907 ORTHO05D000065 3.6e-10 69.3 179 30.7
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 4.7e-10 68.9 107 39.3
QL93p0160_0016 Quercus lobata HOM05D002907 ORTHO05D000065 4.7e-10 68.9 84 41.7
Solyc12g038810.3 Solanum lycopersicum HOM05D000088 ORTHO05D017758 3.1e-09 66.2 53 60.4
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 4.0e-09 65.9 90 37.8
Sopen08g012630 Solanum pennellii HOM05D000096 ORTHO05D000045 5.2e-09 65.5 49 65.3
Hma1.2p1_0045F.1_g026410 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.2e-08 64.3 154 28.6
DCAR_011057 Daucus carota HOM05D002907 ORTHO05D000065 2.6e-08 63.2 83 34.9
DCAR_031592 Daucus carota HOM05D002907 ORTHO05D000065 5.8e-08 62.0 83 33.7
Lj1A275T36 Lonicera japonica HOM05D002907 ORTHO05D000065 7.5e-08 61.6 87 36.8
Lj7A628T41 Lonicera japonica HOM05D002907 ORTHO05D000065 7.5e-08 61.6 87 36.8
DCAR_031299 Daucus carota HOM05D000001 ORTHO05D000003 1.3e-07 60.8 83 33.7
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 1.3e-07 60.8 83 37.3
DCAR_031322 Daucus carota HOM05D002907 ORTHO05D000065 1.7e-07 60.5 83 33.7
DCAR_032054 Daucus carota HOM05D002907 ORTHO05D000065 1.7e-07 60.5 82 30.5
CARHR152820 Cardamine hirsuta HOM05D000305 ORTHO05D000065 3.7e-07 59.3 84 40.5
DCAR_001457 Daucus carota HOM05D002907 ORTHO05D000065 3.7e-07 59.3 82 30.5
DCAR_025606 Daucus carota HOM05D012849 ORTHO05D000065 3.7e-07 59.3 83 36.1
DCAR_001059 Daucus carota HOM05D002907 ORTHO05D000065 4.9e-07 58.9 89 30.3
DCAR_005332 Daucus carota HOM05D002907 ORTHO05D000065 8.3e-07 58.2 84 33.3
SGA_v2.0_scaffold21G09448 Striga asiatica HOM05D000353 ORTHO05D000174 1.1e-06 57.8 119 31.9
DCAR_031560 Daucus carota HOM05D002907 ORTHO05D014614 1.4e-06 57.4 107 32.7
TWI39G0069 Tripterygium wilfordii HOM05D002907 ORTHO05D005554 1.4e-06 57.4 129 29.5
Aa31LG7G11790 Aethionema arabicum HOM05D000353 ORTHO05D000174 1.9e-06 57.0 139 30.9
ECA233G0025 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.9e-06 57.0 84 32.1
Lj2A19T41 Lonicera japonica HOM05D002907 ORTHO05D000065 2.4e-06 56.6 80 37.5
SGA_v2.0_scaffold49G18365 Striga asiatica HOM05D024561 ORTHO05D002376 2.4e-06 56.6 83 34.9
DCAR_020214 Daucus carota HOM05D002907 ORTHO05D000065 3.2e-06 56.2 81 34.6
DCAR_002774 Daucus carota HOM05D002907 ORTHO05D000065 4.1e-06 55.8 81 34.6
DCAR_010742 Daucus carota HOM05D002907 ORTHO05D000065 4.1e-06 55.8 86 34.9
HanXRQChr09g0257401 Helianthus annuus HOM05D003964 ORTHO05D000174 4.1e-06 55.8 96 30.2
DCAR_007681 Daucus carota HOM05D002907 ORTHO05D000065 5.4e-06 55.5 86 33.7
Solyc06g034070.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 5.4e-06 55.5 34 73.5
Medtr4g043700 Medicago truncatula HOM05D002441 ORTHO05D002376 7.0e-06 55.1 82 35.4
Solyc02g014340.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 7.0e-06 55.1 122 36.9
ECA238G1979 Erigeron canadensis HOM05D003964 ORTHO05D000174 9.2e-06 54.7 97 34.0
ECA248G0798 Erigeron canadensis HOM05D003964 ORTHO05D000174 9.2e-06 54.7 97 34.0
HanXRQChr13g0403861 Helianthus annuus HOM05D003964 ORTHO05D000174 9.2e-06 54.7 100 35.0
HanXRQChr14g0436911 Helianthus annuus HOM05D003964 ORTHO05D000174 9.2e-06 54.7 100 35.0
Medtr4g070090 Medicago truncatula HOM05D002907 ORTHO05D000065 9.2e-06 54.7 96 34.4
Medtr5g027390 Medicago truncatula HOM05D002907 ORTHO05D000065 9.2e-06 54.7 96 34.4
Medtr5g057125 Medicago truncatula HOM05D000353 ORTHO05D002376 9.2e-06 54.7 147 27.9
Medtr7g051400 Medicago truncatula HOM05D008036 ORTHO05D000174 9.2e-06 54.7 81 30.9


User provided reference genes

Program Settings