Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G181.24 Capsicum annuum HOM05D000679 ORTHO05D000137 7.8e-91 337.0 162 100.0
CAN.G775.17 Capsicum annuum HOM05D000679 ORTHO05D000137 1.5e-25 120.2 76 77.6
CAN.G479.44 Capsicum annuum HOM05D000679 ORTHO05D000137 2.2e-21 106.3 60 85.0
CAN.G294.3 Capsicum annuum HOM05D000679 ORTHO05D000137 3.2e-20 102.4 65 73.8
Sopen10g028350 Solanum pennellii HOM05D000679 ORTHO05D000137 3.0e-10 69.3 74 43.2
Sopen05g022570 Solanum pennellii HOM05D000679 ORTHO05D000137 4.0e-10 68.9 74 43.2
Solyc10g076970.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.5e-09 67.0 141 32.6
Sopen01g026480 Solanum pennellii HOM05D000679 ORTHO05D000137 2.0e-09 66.6 74 41.9
Sopen09g029010 Solanum pennellii HOM05D000679 ORTHO05D000137 3.4e-09 65.9 74 40.5
CAN.G707.7 Capsicum annuum HOM05D000541 ORTHO05D000137 4.4e-09 65.5 109 35.8
PGSC0003DMG400043182 Solanum tuberosum HOM05D000679 ORTHO05D000137 4.4e-09 65.5 74 37.8
Sopen06g003810 Solanum pennellii HOM05D000679 ORTHO05D000137 5.7e-09 65.1 141 32.6
Sopen05g015890 Solanum pennellii HOM05D010988 ORTHO05D000137 9.8e-09 64.3 74 36.5
Solyc05g150115.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.3e-08 63.9 141 31.9
Solyc07g008677.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.3e-08 63.9 141 31.9
Solyc08g016583.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.3e-08 63.9 74 44.6
Sopen06g003040 Solanum pennellii HOM05D000679 ORTHO05D000137 1.3e-08 63.9 141 31.9
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 1.3e-08 63.9 141 31.9
Sopen12g007430 Solanum pennellii HOM05D000679 ORTHO05D000137 1.3e-08 63.9 141 31.9
Solyc08g074525.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.7e-08 63.5 141 32.6
Solyc08g044337.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 2.8e-08 62.8 141 31.2
Sopen06g011260 Solanum pennellii HOM05D000679 ORTHO05D000137 2.8e-08 62.8 74 45.9
CAN.G1239.12 Capsicum annuum HOM05D000679 ORTHO05D000137 3.7e-08 62.4 61 47.5
Sopen03g006990 Solanum pennellii HOM05D000679 ORTHO05D000137 3.7e-08 62.4 141 31.9
Sopen10g007210 Solanum pennellii HOM05D000679 ORTHO05D000137 3.7e-08 62.4 141 31.2
CAN.G1164.36 Capsicum annuum HOM05D000541 ORTHO05D000137 4.9e-08 62.0 53 54.7
Solyc01g094723.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 4.9e-08 62.0 141 30.5
Solyc08g014618.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 4.9e-08 62.0 141 31.2
Sopen12g022620 Solanum pennellii HOM05D010988 ORTHO05D000137 4.9e-08 62.0 74 35.1
CAN.G326.12 Capsicum annuum HOM05D000679 ORTHO05D000137 6.3e-08 61.6 74 41.9
Sopen08g017850 Solanum pennellii HOM05D000679 ORTHO05D000137 6.3e-08 61.6 63 39.7
CAN.G1070.5 Capsicum annuum HOM05D000541 ORTHO05D000137 8.3e-08 61.2 54 51.9
PGSC0003DMG400045185 Solanum tuberosum HOM05D000679 ORTHO05D000137 8.3e-08 61.2 74 39.2
Sopen09g020240 Solanum pennellii HOM05D010988 ORTHO05D000137 1.1e-07 60.8 74 33.8
CAN.G1079.4 Capsicum annuum HOM05D000679 ORTHO05D000137 1.4e-07 60.5 93 33.3
PGSC0003DMG400037369 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.4e-07 60.5 74 37.8
Sopen10g022330 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-07 59.7 74 33.8
Sopen07g017260 Solanum pennellii HOM05D000679 ORTHO05D000137 3.1e-07 59.3 63 39.7
CAN.G10.11 Capsicum annuum HOM05D000541 ORTHO05D000137 4.1e-07 58.9 54 50.0
CAN.G411.2 Capsicum annuum HOM05D000679 ORTHO05D000137 4.1e-07 58.9 67 47.8
CAN.G500.47 Capsicum annuum HOM05D000541 ORTHO05D000137 4.1e-07 58.9 72 41.7
CAN.G585.21 Capsicum annuum HOM05D000541 ORTHO05D000137 4.1e-07 58.9 54 50.0
CAN.G874.53 Capsicum annuum HOM05D000679 ORTHO05D000137 4.1e-07 58.9 61 44.3
PGSC0003DMG400045258 Solanum tuberosum HOM05D000679 ORTHO05D000137 4.1e-07 58.9 55 43.6
CAN.G1864.2 Capsicum annuum HOM05D000541 ORTHO05D000137 5.4e-07 58.5 72 40.3
CAN.G634.2 Capsicum annuum HOM05D000541 ORTHO05D000137 5.4e-07 58.5 67 44.8
CAN.G702.38 Capsicum annuum HOM05D000541 ORTHO05D000137 5.4e-07 58.5 85 41.2
Sopen00g004650 Solanum pennellii HOM05D000679 ORTHO05D000137 5.4e-07 58.5 63 39.7
Sopen12g024080 Solanum pennellii HOM05D000679 ORTHO05D000137 5.4e-07 58.5 63 39.7
PGSC0003DMG400038856 Solanum tuberosum HOM05D000541 ORTHO05D000137 5.4e-07 58.5 53 50.9
CAN.G1784.2 Capsicum annuum HOM05D000541 ORTHO05D000137 7.0e-07 58.2 74 43.2
CAN.G990.2 Capsicum annuum HOM05D000541 ORTHO05D000137 9.2e-07 57.8 72 43.1
CAN.G257.82 Capsicum annuum HOM05D000679 ORTHO05D000137 1.2e-06 57.4 61 45.9
CAN.G335.1 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-06 57.4 78 38.5
CAN.G354.30 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-06 57.4 75 42.7
CAN.G93.4 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-06 57.4 73 38.4
Solyc03g034203.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.2e-06 57.4 74 41.9
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 1.2e-06 57.4 69 37.7
CAN.G1228.4 Capsicum annuum HOM05D000541 ORTHO05D000137 1.6e-06 57.0 54 48.1
CAN.G632.7 Capsicum annuum HOM05D000541 ORTHO05D000137 1.6e-06 57.0 72 41.7
Solyc01g059760.3 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.6e-06 57.0 74 39.2
CAN.G433.2 Capsicum annuum HOM05D000541 ORTHO05D000137 2.0e-06 56.6 54 50.0
CAN.G977.4 Capsicum annuum HOM05D000541 ORTHO05D000137 2.0e-06 56.6 72 40.3
PGSC0003DMG400023258 Solanum tuberosum HOM05D000541 ORTHO05D000137 2.0e-06 56.6 122 28.7
CAN.G1129.51 Capsicum annuum HOM05D000541 ORTHO05D000137 2.7e-06 56.2 141 29.8
CAN.G1191.13 Capsicum annuum HOM05D000679 ORTHO05D000137 2.7e-06 56.2 55 50.9
CAN.G2506.1 Capsicum annuum HOM05D000541 ORTHO05D000137 2.7e-06 56.2 54 48.1
Solyc01g066915.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 2.7e-06 56.2 141 29.8
Solyc09g020160.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 2.7e-06 56.2 74 41.9
Sopen01g030890 Solanum pennellii HOM05D000679 ORTHO05D000137 2.7e-06 56.2 63 39.7
CAN.G823.9 Capsicum annuum HOM05D000541 ORTHO05D000137 3.5e-06 55.8 73 38.4
Sopen08g014670 Solanum pennellii HOM05D000679 ORTHO05D000482 3.5e-06 55.8 77 39.0
Sopen12g021510 Solanum pennellii HOM05D000679 ORTHO05D000137 3.5e-06 55.8 63 39.7
PGSC0003DMG400037565 Solanum tuberosum HOM05D000679 ORTHO05D000137 3.5e-06 55.8 75 38.7
CAN.G273.9 Capsicum annuum HOM05D000541 ORTHO05D000137 4.5e-06 55.5 59 45.8
CAN.G357.3 Capsicum annuum HOM05D000541 ORTHO05D000137 4.5e-06 55.5 72 40.3
CAN.G362.44 Capsicum annuum HOM05D000679 ORTHO05D000137 4.5e-06 55.5 62 46.8
Sopen01g016320 Solanum pennellii HOM05D000679 ORTHO05D000482 4.5e-06 55.5 74 36.5
Sopen08g014290 Solanum pennellii HOM05D000679 ORTHO05D014686 4.5e-06 55.5 74 40.5
CAN.G1463.5 Capsicum annuum HOM05D000679 ORTHO05D000137 5.9e-06 55.1 72 41.7
CAN.G975.9 Capsicum annuum HOM05D000340 ORTHO05D000821 5.9e-06 55.1 62 46.8
Nitab4.5_0003033g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.9e-06 55.1 74 37.8
CAN.G1009.2 Capsicum annuum HOM05D000541 ORTHO05D000137 7.7e-06 54.7 54 50.0
CAN.G1337.31 Capsicum annuum HOM05D000541 ORTHO05D000137 7.7e-06 54.7 72 40.3
Nitab4.5_0000695g0080 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.7e-06 54.7 74 35.1
Solyc12g044952.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 7.7e-06 54.7 63 36.5
Sopen00g010790 Solanum pennellii HOM05D000679 ORTHO05D000137 7.7e-06 54.7 121 31.4
Sopen09g012720 Solanum pennellii HOM05D000679 ORTHO05D014686 7.7e-06 54.7 74 37.8


User provided reference genes

Program Settings