Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 1.1e-193 679.9 364 100.0
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 3.9e-138 495.4 392 75.8
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 3.1e-135 485.7 379 75.2
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 7.5e-134 481.1 379 74.7
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 2.2e-133 479.6 391 72.1
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 2.4e-119 433.0 378 69.6
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 3.8e-117 425.6 378 68.8
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 4.8e-56 222.6 387 43.9
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 1.2e-49 201.4 382 43.2
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 3.4e-49 199.9 394 39.3
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 2.8e-48 196.8 390 41.5
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 8.3e-48 195.3 388 42.5
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 2.0e-46 190.7 371 41.2
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 2.9e-45 186.8 377 40.3
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 1.5e-44 184.5 384 40.6
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 2.1e-43 180.6 397 40.3
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 2.7e-43 180.3 398 37.4
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 4.0e-42 176.4 404 37.4
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 6.8e-42 175.6 315 44.8
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 2.6e-41 173.7 392 36.5
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 3.7e-40 169.9 399 36.8
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 1.4e-39 167.9 380 38.4
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 1.8e-39 167.5 383 39.7
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 1.8e-39 167.5 395 37.0
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 4.1e-39 166.4 390 37.2
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 5.4e-39 166.0 405 37.0
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 9.1e-39 165.2 436 32.8
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 9.1e-39 165.2 399 37.6
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 1.2e-38 164.9 389 37.3
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 1.2e-38 164.9 197 49.2
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 1.6e-38 164.5 370 38.1
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 4.5e-38 162.9 379 37.2
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 2.3e-37 160.6 388 36.6
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 2.3e-37 160.6 374 38.0
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 2.3e-37 160.6 380 38.2
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 2.9e-37 160.2 390 37.4
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 1.1e-36 158.3 408 35.3
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 3.3e-36 156.8 385 36.6
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 5.5e-36 156.0 370 35.9
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 2.1e-35 154.1 394 36.5
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 3.6e-35 153.3 410 33.9
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 3.6e-35 153.3 402 33.3
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 3.6e-35 153.3 433 33.5
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 6.1e-35 152.5 402 37.8
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 3.0e-34 150.2 379 37.2
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 1.5e-33 147.9 351 34.8
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 4.4e-33 146.4 379 34.0
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 5.7e-33 146.0 296 39.9
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 1.7e-32 144.4 397 36.5
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 2.9e-32 143.7 393 33.1
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 3.7e-32 143.3 404 34.4
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 4.9e-32 142.9 407 31.4
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 1.1e-31 141.7 405 33.3
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 1.1e-31 141.7 383 35.8
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 1.4e-31 141.4 365 34.5
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 1.4e-31 141.4 369 35.2
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 1.8e-31 141.0 329 39.2
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 2.4e-31 140.6 384 36.2
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 4.1e-31 139.8 380 35.8
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 5.4e-31 139.4 396 35.4
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 4.6e-30 136.3 380 36.3
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 5.9e-30 136.0 385 34.8
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 5.9e-30 136.0 414 35.5
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 1.0e-29 135.2 376 35.1
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 3.9e-29 133.3 380 35.8
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 1.5e-28 131.3 376 33.8
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 4.3e-28 129.8 373 32.4
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 5.6e-28 129.4 392 33.7
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 7.3e-28 129.0 338 32.8
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 2.1e-27 127.5 323 35.3
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 2.8e-27 127.1 389 33.2
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 2.8e-27 127.1 415 32.3
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 6.1e-27 125.9 316 35.1
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 1.4e-26 124.8 418 30.9
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 1.8e-26 124.4 407 31.4
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 2.3e-26 124.0 316 34.8
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 2.3e-26 124.0 381 32.5
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 3.1e-26 123.6 375 34.9
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 5.2e-26 122.9 380 31.1
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 5.2e-26 122.9 380 31.1
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 6.8e-26 122.5 391 32.0
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 5.8e-25 119.4 392 32.7
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 5.8e-25 119.4 392 32.7
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 7.5e-25 119.0 389 30.3
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 9.8e-25 118.6 386 31.6
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 1.3e-24 118.2 385 33.5
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 1.7e-24 117.9 206 39.8
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 1.7e-24 117.9 261 36.4
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 2.9e-24 117.1 369 31.7
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 6.4e-24 115.9 323 34.4
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 3.2e-23 113.6 222 43.2
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 5.4e-23 112.8 393 31.6
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 1.0e-21 108.6 162 45.1
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 3.9e-21 106.7 190 37.9
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 1.5e-20 104.8 397 31.5
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 5.2e-18 96.3 435 28.0
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 1.3e-16 91.7 180 38.9
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 1.7e-16 91.3 449 26.1
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 1.7e-16 91.3 411 30.4
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 2.4e-15 87.4 163 38.7
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 4.1e-15 86.7 337 30.9
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.6e-14 84.7 143 46.2
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.6e-14 84.7 128 48.4
ATR0602G285 Amborella trichopoda HOM05D006668 ORTHO05D008252 5.8e-09 66.2 143 37.8
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 2.2e-08 64.3 348 26.1


User provided reference genes

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