Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 1.7e-128 463.0 286 100.0
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 3.5e-118 428.7 289 93.1
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 1.3e-117 426.8 289 93.1
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.7e-117 426.4 289 83.4
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.7e-117 426.4 289 85.5
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 1.1e-111 407.1 325 82.5
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 1.2e-99 367.1 286 77.6
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 4.0e-98 362.1 212 89.6
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 2.0e-97 359.8 285 68.8
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 1.7e-96 356.7 287 68.6
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 2.2e-96 356.3 251 75.7
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 2.9e-96 355.9 286 68.2
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 3.7e-96 355.5 286 74.5
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 3.7e-96 355.5 286 68.2
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 1.4e-95 353.6 286 68.2
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 2.4e-95 352.8 288 67.7
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 4.1e-95 352.1 288 67.7
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 1.6e-94 350.1 287 67.6
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 7.8e-94 347.8 282 70.9
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.0e-93 347.4 296 66.9
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 3.9e-93 345.5 288 67.4
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 6.6e-93 344.7 290 66.9
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 1.5e-92 343.6 287 73.2
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 1.6e-91 340.1 291 66.7
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 1.6e-91 340.1 286 66.4
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 1.6e-91 340.1 254 72.8
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 2.8e-91 339.3 286 72.4
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 2.8e-91 339.3 286 66.4
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 2.8e-91 339.3 286 70.3
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 3.6e-91 339.0 286 68.9
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 6.2e-91 338.2 254 73.2
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 1.4e-90 337.0 254 72.8
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 1.4e-90 337.0 294 66.3
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 2.4e-90 336.3 289 66.8
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 3.1e-90 335.9 254 72.8
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 4.0e-90 335.5 284 64.4
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 5.2e-90 335.1 288 71.2
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 5.2e-90 335.1 318 61.0
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 6.8e-90 334.7 288 65.6
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 8.9e-90 334.3 247 79.4
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 1.2e-89 334.0 294 71.1
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 1.2e-89 334.0 285 66.0
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 2.6e-89 332.8 286 74.5
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 3.4e-89 332.4 292 72.3
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 5.8e-89 331.6 291 71.8
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 5.8e-89 331.6 285 67.4
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 7.6e-89 331.3 288 64.6
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 1.7e-88 330.1 291 67.4
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 1.7e-88 330.1 290 69.3
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 2.9e-88 329.3 289 71.3
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 6.4e-88 328.2 283 65.4
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 8.4e-88 327.8 288 69.1
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 8.4e-88 327.8 290 71.4
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 1.1e-87 327.4 298 60.7
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 1.1e-87 327.4 268 66.8
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 1.4e-87 327.0 287 70.4
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 1.9e-87 326.6 289 70.9
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 1.9e-87 326.6 289 70.9
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 1.9e-87 326.6 282 63.8
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 7.1e-87 324.7 289 70.6
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 1.2e-86 323.9 282 65.6
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 2.1e-86 323.2 282 65.2
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 2.7e-86 322.8 289 70.2
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 2.7e-86 322.8 301 66.4
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 3.5e-86 322.4 263 66.2
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 3.5e-86 322.4 309 64.7
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 4.6e-86 322.0 286 64.3
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 4.6e-86 322.0 304 67.4
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 3.0e-85 319.3 300 61.3
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 3.0e-85 319.3 287 63.1
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 1.1e-84 317.4 301 65.4
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 1.9e-84 316.6 254 67.7
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 2.5e-84 316.2 252 68.3
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 4.3e-84 315.5 290 66.2
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 7.3e-84 314.7 293 67.2
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 1.1e-82 310.8 303 59.4
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.4e-82 310.5 286 62.9
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 2.0e-81 306.6 282 61.0
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 4.4e-81 305.4 284 66.5
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 1.9e-79 300.1 283 60.4
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.9e-79 300.1 283 60.4
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 9.3e-79 297.7 283 60.1
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 4.6e-78 295.4 301 56.5
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 6.0e-78 295.0 282 60.3
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 7.9e-78 294.7 316 57.6
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.5e-76 290.4 287 58.9
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.5e-76 290.4 287 58.9
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.6e-75 287.0 253 65.6
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 2.1e-75 286.6 180 83.9
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 8.1e-75 284.6 312 54.8
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 1.1e-74 284.3 282 57.1
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 1.5e-73 280.4 267 61.8
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 2.6e-73 279.6 292 58.6
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 3.8e-72 275.8 173 82.7
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 2.7e-70 269.6 287 59.9
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 1.9e-68 263.5 173 79.8
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 1.9e-68 263.5 286 55.2
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 3.3e-68 262.7 260 60.0
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.3e-64 250.8 255 59.6
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 2.2e-64 250.0 289 56.1
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 1.0e-61 241.1 407 41.8
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 2.3e-61 240.0 257 56.4
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 4.3e-52 209.1 133 82.0
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 5.3e-50 202.2 199 56.8
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 7.2e-47 191.8 158 69.0
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 1.5e-44 184.1 182 62.1
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.2e-41 174.5 178 59.0
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 3.2e-39 166.4 132 67.4
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 3.5e-33 146.4 145 62.1
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 3.6e-30 136.3 167 49.7
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 8.0e-30 135.2 77 88.3
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 2.8e-27 126.7 150 50.0
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 1.9e-23 114.0 120 57.5
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 4.0e-21 106.3 113 55.8
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 2.9e-16 90.1 114 49.1
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 8.5e-16 88.6 112 49.1
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 1.1e-15 88.2 94 51.1
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 8.3e-11 72.0 42 83.3
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 3.3e-07 60.1 74 50.0
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 2.8e-06 57.0 72 50.0


User provided reference genes

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