Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G179.2 Capsicum annuum HOM05D000314 ORTHO05D000189 1.1e-76 290.0 161 100.0
CAN.G206.139 Capsicum annuum HOM05D000314 ORTHO05D000189 1.3e-45 186.8 103 88.3
PGSC0003DMG400001319 Solanum tuberosum HOM05D000314 ORTHO05D000189 4.3e-41 171.8 103 83.5
Solyc02g087850.1 Solanum lycopersicum HOM05D000314 ORTHO05D000189 2.1e-40 169.5 103 82.5
Sopen02g032570 Solanum pennellii HOM05D000314 ORTHO05D000189 6.2e-40 167.9 103 82.5
Nitab4.5_0000564g0160 Nicotiana tabacum HOM05D000314 ORTHO05D000189 1.4e-39 166.8 104 81.7
Peaxi162Scf00129g00313 Petunia axillaris HOM05D000314 ORTHO05D000189 6.0e-35 151.4 103 76.7
Nitab4.5_0006635g0010 Nicotiana tabacum HOM05D000314 ORTHO05D000189 9.7e-25 117.5 78 78.2
Nitab4.5_0000002g0340 Nicotiana tabacum HOM05D000314 ORTHO05D000189 1.3e-24 117.1 109 58.7
Nitab4.5_0003081g0030 Nicotiana tabacum HOM05D000314 ORTHO05D000189 2.2e-24 116.3 109 57.8
Migut.H00907 Erythranthe guttata HOM05D000314 ORTHO05D000189 8.2e-24 114.4 122 55.7
MSTRG.23950 Avicennia marina HOM05D000314 ORTHO05D000189 6.9e-23 111.3 123 52.0
Peaxi162Scf00777g00039 Petunia axillaris HOM05D000314 ORTHO05D000189 4.5e-22 108.6 104 55.8
Cc07_g03220 Coffea canephora HOM05D000314 ORTHO05D000189 5.9e-22 108.2 123 53.7
PGSC0003DMG400006934 Solanum tuberosum HOM05D000314 ORTHO05D000189 3.8e-21 105.5 111 55.0
PGSC0003DMG400022074 Solanum tuberosum HOM05D000314 ORTHO05D000189 1.9e-20 103.2 111 54.1
Hma1.2p1_1733F.1_g299840 Hydrangea macrophylla HOM05D000314 ORTHO05D000189 1.6e-19 100.1 118 50.0
MSTRG.3227 Avicennia marina HOM05D000314 ORTHO05D000189 2.7e-19 99.4 120 45.8
Dinv33742 Davidia involucrata HOM05D000314 ORTHO05D000189 2.7e-19 99.4 112 50.0
CANSAT64G0283 Cannabis sativa HOM05D000314 ORTHO05D000189 1.8e-18 96.7 110 49.1
CANSAT64G0890 Cannabis sativa HOM05D000314 ORTHO05D000189 1.8e-18 96.7 110 49.1
Haze_14557 Corylus avellana HOM05D000314 ORTHO05D000189 1.8e-18 96.7 116 47.4
CiPaw.03G028700 Carya illinoinensis HOM05D000314 ORTHO05D000189 3.0e-18 95.9 121 48.8
Ciclev10011708m.g Citrus clementina HOM05D000314 ORTHO05D000189 6.7e-18 94.7 128 46.9
Dinv06529 Davidia involucrata HOM05D000314 ORTHO05D000189 8.8e-18 94.4 111 50.5
Cfa007531 Carpinus fangiana HOM05D000314 ORTHO05D000189 1.1e-17 94.0 118 47.5
PGR142G1567 Punica granatum HOM05D000314 ORTHO05D000189 1.1e-17 94.0 121 47.1
CSS0049990 Camellia sinensis var. sinensis HOM05D000314 ORTHO05D000189 2.0e-17 93.2 124 46.8
Eucgr.J01217 Eucalyptus grandis HOM05D000314 ORTHO05D000189 2.0e-17 93.2 116 48.3
Oeu050218.1 Olea europaea HOM05D000314 ORTHO05D000189 2.0e-17 93.2 112 48.2
TWI32G0863 Tripterygium wilfordii HOM05D000314 ORTHO05D000189 2.0e-17 93.2 124 44.4
CSS0006151 Camellia sinensis var. sinensis HOM05D000314 ORTHO05D000189 2.6e-17 92.8 127 45.7
Nitab4.5_0000274g0100 Nicotiana tabacum HOM05D000314 ORTHO05D000189 2.6e-17 92.8 90 57.8
Actinidia23564 Actinidia chinensis HOM05D000314 ORTHO05D000189 5.7e-17 91.7 110 47.3
Glyma.09G239300 Glycine max HOM05D000314 ORTHO05D000189 5.7e-17 91.7 138 44.2
Prupe.3G269700 Prunus persica HOM05D000314 ORTHO05D000189 7.4e-17 91.3 128 44.5
Actinidia36022 Actinidia chinensis HOM05D000314 ORTHO05D000189 1.3e-16 90.5 110 46.4
DCAR_011143 Daucus carota HOM05D000314 ORTHO05D000189 1.3e-16 90.5 111 48.6
Atru.chr8.197 Acer truncatum HOM05D000314 ORTHO05D000189 1.7e-16 90.1 120 47.5
Glyma.18G258500 Glycine max HOM05D000314 ORTHO05D000189 1.7e-16 90.1 138 42.8
Rhsim10G0041100 Rhododendron simsii HOM05D000314 ORTHO05D000189 1.7e-16 90.1 116 47.4
TAR371G1000 Trochodendron aralioides HOM05D000314 ORTHO05D000189 2.2e-16 89.7 106 43.4
CSS0026367 Camellia sinensis var. sinensis HOM05D000314 ORTHO05D000189 3.7e-16 89.0 103 47.6
Potri.017G081600 Populus trichocarpa HOM05D000314 ORTHO05D000189 4.8e-16 88.6 122 44.3
vmacro05718 Vaccinium macrocarpon HOM05D000314 ORTHO05D000189 4.8e-16 88.6 116 49.1
Gohir.D04G049900 Gossypium hirsutum HOM05D000314 ORTHO05D000189 6.3e-16 88.2 114 47.4
Manes.15G174900 Manihot esculenta HOM05D000314 ORTHO05D000189 6.3e-16 88.2 122 46.7
QL02p081436 Quercus lobata HOM05D000314 ORTHO05D000189 6.3e-16 88.2 124 43.5
VMungo1383G0918 Vigna mungo HOM05D000314 ORTHO05D000189 6.3e-16 88.2 136 42.6
Gohir.A05G364900 Gossypium hirsutum HOM05D000314 ORTHO05D000189 1.1e-15 87.4 114 47.4
Gorai.012G055300 Gossypium raimondii HOM05D000314 ORTHO05D000189 1.1e-15 87.4 114 47.4
TWI34G0382 Tripterygium wilfordii HOM05D000314 ORTHO05D000189 1.4e-15 87.0 122 42.6
TAR622G0623 Trochodendron aralioides HOM05D000314 ORTHO05D000189 1.4e-15 87.0 115 45.2
EL10Ac2g02956 Beta vulgaris HOM05D000314 ORTHO05D000189 1.8e-15 86.7 121 45.5
Lsat_1_v5_gn_2_88900 Lactuca sativa HOM05D000314 ORTHO05D000189 2.4e-15 86.3 117 43.6
MD09G1049100 Malus domestica HOM05D000314 ORTHO05D000189 2.4e-15 86.3 119 43.7
TAR374G1658 Trochodendron aralioides HOM05D000314 ORTHO05D000189 2.4e-15 86.3 119 43.7
Medtr7g010090 Medicago truncatula HOM05D000314 ORTHO05D000189 5.3e-15 85.1 156 39.1
Phvul.008G042000 Phaseolus vulgaris HOM05D000314 ORTHO05D000189 5.3e-15 85.1 136 39.0
ECA238G4510 Erigeron canadensis HOM05D000314 ORTHO05D000189 1.2e-14 84.0 113 46.9
Ca_02741_v3 Cicer arietinum L. HOM05D000314 ORTHO05D000189 1.5e-14 83.6 148 37.8
RcHm_v2.0_Chr2g0168831 Rosa chinensis HOM05D000314 ORTHO05D000189 1.5e-14 83.6 128 42.2
Sc11g0007010 Simmondsia chinensis HOM05D000314 ORTHO05D000189 1.5e-14 83.6 114 46.5
CAN.G76.8 Capsicum annuum HOM05D000314 ORTHO05D000189 2.0e-14 83.2 109 48.6
Thecc.04G078500 Theobroma cacao HOM05D000314 ORTHO05D000189 2.0e-14 83.2 119 43.7
TPR.G23843 Trifolium pratense HOM05D000314 ORTHO05D000189 2.6e-14 82.8 151 39.7
Gohir.A09G019300 Gossypium hirsutum HOM05D000314 ORTHO05D000189 3.4e-14 82.4 114 43.9
MD17G1049100 Malus domestica HOM05D000314 ORTHO05D000189 3.4e-14 82.4 116 44.8
Ah.10g031410 Amaranthus hybridus HOM05D000314 ORTHO05D000189 4.5e-14 82.0 129 41.1
Gohir.D09G018700 Gossypium hirsutum HOM05D000314 ORTHO05D000189 4.5e-14 82.0 114 43.9
Gorai.006G022000 Gossypium raimondii HOM05D000314 ORTHO05D000189 4.5e-14 82.0 114 43.9
HanXRQChr15g0474081 Helianthus annuus HOM05D000314 ORTHO05D000189 4.5e-14 82.0 113 41.6
Cpa.g.sc14.17 Carica papaya HOM05D000314 ORTHO05D000189 5.9e-14 81.6 124 42.7
Sed0016083 Sechium edule HOM05D000314 ORTHO05D000189 5.9e-14 81.6 125 44.0
CsaV3_5G037930 Cucumis sativus L. HOM05D000314 ORTHO05D000189 7.7e-14 81.3 115 46.1
PGR083G2079 Punica granatum HOM05D000314 ORTHO05D000189 7.7e-14 81.3 119 42.9
HanXRQChr14g0449891 Helianthus annuus HOM05D000314 ORTHO05D000189 1.0e-13 80.9 116 46.6
Duzib147G1228 Durio zibethinus HOM05D000314 ORTHO05D000189 1.3e-13 80.5 118 43.2
ClCG10G014950 Citrullus lanatus HOM05D000314 ORTHO05D000189 1.7e-13 80.1 111 44.1
Duzib264G0035 Durio zibethinus HOM05D000314 ORTHO05D000189 2.2e-13 79.7 118 41.5
Oeu027779.1 Olea europaea HOM05D000314 ORTHO05D000189 2.2e-13 79.7 115 43.5
CsaV3_3G041570 Cucumis sativus L. HOM05D000314 ORTHO05D000189 2.9e-13 79.3 121 42.1
MELO3C021979.2 Cucumis melo HOM05D000314 ORTHO05D000189 3.8e-13 79.0 115 44.3
DCAR_006727 Daucus carota HOM05D000314 ORTHO05D000189 3.8e-13 79.0 112 47.3
FvH4_6g48990 Fragaria vesca HOM05D000314 ORTHO05D000189 3.8e-13 79.0 124 43.5
Psat3g196440 Pisum sativum HOM05D000314 ORTHO05D000189 3.8e-13 79.0 141 39.0
FAN05G1502 Fragaria x ananassa HOM05D000314 ORTHO05D000189 5.0e-13 78.6 132 41.7
FAN14G1432 Fragaria x ananassa HOM05D000314 ORTHO05D000189 5.0e-13 78.6 124 43.5
MELO3C009882.2 Cucumis melo HOM05D000314 ORTHO05D000189 8.5e-13 77.8 120 41.7
unitig_899.g15511 Utricularia gibba HOM05D000314 ORTHO05D000189 1.1e-12 77.4 116 42.2
ClCG09G018350 Citrullus lanatus HOM05D000314 ORTHO05D000189 1.4e-12 77.0 127 39.4
FAN09G0630 Fragaria x ananassa HOM05D000314 ORTHO05D000189 3.2e-12 75.9 126 41.3
Lj1g0008622 Lotus japonicus HOM05D000314 ORTHO05D000189 3.2e-12 75.9 148 35.8
Lsat_1_v5_gn_3_100480 Lactuca sativa HOM05D000314 ORTHO05D000189 4.2e-12 75.5 112 41.1
Peaxi162Scf00451g00083 Petunia axillaris HOM05D000314 ORTHO05D000189 1.2e-11 73.9 88 50.0
Aqoxy3G03330 Aquilegia oxysepala HOM05D000314 ORTHO05D000189 1.6e-11 73.6 111 38.7
Manes.17G025635 Manihot esculenta HOM05D000314 ORTHO05D000189 2.7e-11 72.8 131 41.2
DCAR_025370 Daucus carota HOM05D000314 ORTHO05D000189 4.7e-11 72.0 71 50.7
Oeu062120.1 Olea europaea HOM05D000314 ORTHO05D000189 4.7e-11 72.0 65 61.5
Oeu062122.1 Olea europaea HOM05D000314 ORTHO05D000189 4.7e-11 72.0 65 61.5
AUR62034387 Chenopodium quinoa HOM05D000314 ORTHO05D000189 8.0e-11 71.2 99 46.5
Nn3g17173 Nelumbo nucifera HOM05D000314 ORTHO05D000189 8.0e-11 71.2 143 37.8
Sopen02g016540 Solanum pennellii HOM05D000314 ORTHO05D000189 1.0e-10 70.9 87 48.3
Lalb_Chr10g0093301 Lupinus albus HOM05D000314 ORTHO05D000189 1.4e-10 70.5 113 44.2
Phvul.008G042100 Phaseolus vulgaris HOM05D000314 ORTHO05D000189 1.4e-10 70.5 136 37.5
VMungo1383G0922 Vigna mungo HOM05D000314 ORTHO05D000189 1.4e-10 70.5 136 36.8
Thhalv10004235m.g Eutrema salsugineum HOM05D000314 ORTHO05D000189 2.3e-10 69.7 131 39.7
Carub.0007s3586 Capsella rubella HOM05D000314 ORTHO05D000189 3.0e-10 69.3 115 42.6
Eucgr.I01935 Eucalyptus grandis HOM05D000314 ORTHO05D000189 3.0e-10 69.3 118 39.8
Lju41C23T7 Lonicera japonica HOM05D000314 ORTHO05D000189 3.0e-10 69.3 113 42.5
Rhsim08G0068300 Rhododendron simsii HOM05D000314 ORTHO05D000189 3.0e-10 69.3 118 39.0
BcaC06g33644 Brassica carinata HOM05D000314 ORTHO05D000189 3.9e-10 68.9 122 38.5
C07p37730 Brassica napus HOM05D000314 ORTHO05D000189 3.9e-10 68.9 122 38.5
BolC7t44291H Brassica oleracea HOM05D000314 ORTHO05D000189 3.9e-10 68.9 122 38.5
COL.COLO4_05130 Corchorus olitorius HOM05D000314 ORTHO05D000189 3.9e-10 68.9 120 37.5
AT3G28850 Arabidopsis thaliana HOM05D000314 ORTHO05D000189 5.2e-10 68.6 129 41.1
AUR62031608 Chenopodium quinoa HOM05D000314 ORTHO05D000189 5.2e-10 68.6 97 46.4
PSO832G3624 Papaver somniferum HOM05D000314 ORTHO05D000189 5.2e-10 68.6 118 36.4
PSO063G4172 Papaver somniferum HOM05D000314 ORTHO05D000189 6.7e-10 68.2 118 36.4
A06p40320 Brassica napus HOM05D000314 ORTHO05D000189 1.1e-09 67.4 118 40.7
BraA06t26949Z Brassica rapa HOM05D000314 ORTHO05D000189 1.1e-09 67.4 118 40.7
AL5G18600 Arabidopsis lyrata HOM05D000314 ORTHO05D000189 1.5e-09 67.0 129 40.3
HanXRQChr17g0547681 Helianthus annuus HOM05D000314 ORTHO05D000189 1.5e-09 67.0 110 39.1
Oeu060934.1 Olea europaea HOM05D000314 ORTHO05D000189 1.5e-09 67.0 91 47.3
Oeu060935.1 Olea europaea HOM05D000314 ORTHO05D000189 1.5e-09 67.0 91 47.3
CARHR151840 Cardamine hirsuta HOM05D000314 ORTHO05D000189 2.6e-09 66.2 136 36.0
FAN02G4352 Fragaria x ananassa HOM05D000314 ORTHO05D000189 2.6e-09 66.2 98 42.9
ECA246G4344 Erigeron canadensis HOM05D000314 ORTHO05D000189 4.4e-09 65.5 122 36.1
Sp7g02180 Schrenkiella parvula HOM05D000314 ORTHO05D000189 4.4e-09 65.5 127 40.9
C04p46340 Brassica napus HOM05D000314 ORTHO05D000189 5.7e-09 65.1 128 42.2
BolC4t26220H Brassica oleracea HOM05D000314 ORTHO05D000189 5.7e-09 65.1 128 42.2
Sp2g17470 Schrenkiella parvula HOM05D000314 ORTHO05D000189 5.7e-09 65.1 131 38.9
BraA09t36017Z Brassica rapa HOM05D000314 ORTHO05D000189 9.7e-09 64.3 126 39.7
AL7G50280 Arabidopsis lyrata HOM05D000314 ORTHO05D000189 1.3e-08 63.9 140 37.9
A09p03790 Brassica napus HOM05D000314 ORTHO05D000189 1.3e-08 63.9 126 38.9
Thhalv10028210m.g Eutrema salsugineum HOM05D000314 ORTHO05D000189 1.3e-08 63.9 126 38.9
Lalb_Chr06g0175421 Lupinus albus HOM05D000314 ORTHO05D000189 1.3e-08 63.9 115 34.8
Sed0001624 Sechium edule HOM05D000314 ORTHO05D000189 1.3e-08 63.9 109 40.4
Sabra17G0072800 Salix brachista HOM05D000314 ORTHO05D000189 1.7e-08 63.5 90 42.2
VMungo0464G0385 Vigna mungo HOM05D000314 ORTHO05D000189 1.7e-08 63.5 120 35.0
BcaC04g23862 Brassica carinata HOM05D000314 ORTHO05D000189 2.2e-08 63.2 115 38.3
CARHR262320 Cardamine hirsuta HOM05D000314 ORTHO05D000189 2.8e-08 62.8 129 36.4
Lj2g0002877 Lotus japonicus HOM05D000314 ORTHO05D000189 2.8e-08 62.8 117 40.2
THA.LOC104823941 Tarenaya hassleriana HOM05D000314 ORTHO05D000189 2.8e-08 62.8 135 38.5
Aa31LG2G4370 Aethionema arabicum HOM05D000314 ORTHO05D000189 3.7e-08 62.4 144 35.4
BcaB06g27385 Brassica carinata HOM05D000314 ORTHO05D000189 3.7e-08 62.4 131 42.7
BcaC03g17534 Brassica carinata HOM05D000314 ORTHO05D000189 3.7e-08 62.4 119 38.7
C02p55080 Brassica napus HOM05D000314 ORTHO05D000189 3.7e-08 62.4 119 38.7
BolC2t11560H Brassica oleracea HOM05D000314 ORTHO05D000189 3.7e-08 62.4 119 38.7
C09p03990 Brassica napus HOM05D000314 ORTHO05D000189 4.8e-08 62.0 126 38.9
BolC9t53331H Brassica oleracea HOM05D000314 ORTHO05D000189 4.8e-08 62.0 126 38.9
BraA02t08609Z Brassica rapa HOM05D000314 ORTHO05D000189 4.8e-08 62.0 119 37.8
Lalb_Chr02g0159631 Lupinus albus HOM05D000314 ORTHO05D000189 6.3e-08 61.6 114 36.0
A02p36100 Brassica napus HOM05D000314 ORTHO05D000189 8.2e-08 61.2 119 37.8
Carub.0005s0739 Capsella rubella HOM05D000314 ORTHO05D000189 8.2e-08 61.2 126 39.7
AT5G39865 Arabidopsis thaliana HOM05D000314 ORTHO05D000189 1.1e-07 60.8 131 38.9
TPR.G10373 Trifolium pratense HOM05D000314 ORTHO05D000189 1.4e-07 60.5 144 34.0
arahy.Tifrunner.gnm1.ann1.G540IJ Arachis hypogaea HOM05D000314 ORTHO05D000189 1.8e-07 60.1 140 35.0
BcaB04g19485 Brassica carinata HOM05D000314 ORTHO05D000189 1.8e-07 60.1 126 37.3
FAN14G3071 Fragaria x ananassa HOM05D000314 ORTHO05D000189 1.8e-07 60.1 108 42.6
A04p12620 Brassica napus HOM05D000314 ORTHO05D000189 4.1e-07 58.9 125 38.4
BraA04t16919Z Brassica rapa HOM05D000314 ORTHO05D000189 4.1e-07 58.9 125 38.4
Actinidia17539 Actinidia chinensis HOM05D000314 ORTHO05D000189 9.1e-07 57.8 155 32.9
BcaB07g30113 Brassica carinata HOM05D000314 ORTHO05D000189 1.2e-06 57.4 119 37.8
Actinidia02711 Actinidia chinensis HOM05D000314 ORTHO05D000189 1.6e-06 57.0 101 42.6
Aa31LG9G16310 Aethionema arabicum HOM05D000314 ORTHO05D000189 1.6e-06 57.0 114 39.5
THA.LOC104808024 Tarenaya hassleriana HOM05D000314 ORTHO05D000189 1.6e-06 57.0 139 36.0
BcaC06g30892 Brassica carinata HOM05D000314 ORTHO05D000189 2.0e-06 56.6 125 36.8
SGA_v2.0_scaffold196G40958 Striga asiatica HOM05D000314 ORTHO05D000189 2.0e-06 56.6 91 41.8
Sed0023486 Sechium edule HOM05D000314 ORTHO05D000189 3.5e-06 55.8 103 37.9
GSVIVG01011378001 Vitis vinifera HOM05D000314 ORTHO05D000189 4.5e-06 55.5 56 50.0


User provided reference genes

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