Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1784.8 Capsicum annuum HOM05D000141 ORTHO05D011930 5.7e-50 200.7 106 100.0
CAN.G2478.1 Capsicum annuum HOM05D000141 ORTHO05D011930 5.5e-45 184.1 106 94.3
CAN.G2301.2 Capsicum annuum HOM05D000141 ORTHO05D011930 2.8e-44 181.8 105 93.3
CAN.G1237.15 Capsicum annuum HOM05D000141 ORTHO05D000780 8.0e-44 180.3 104 94.2
CAN.G182.1 Capsicum annuum HOM05D000141 ORTHO05D000780 8.0e-44 180.3 104 94.2
CAN.G182.2 Capsicum annuum HOM05D000141 ORTHO05D000780 8.0e-44 180.3 104 94.2
CAN.G182.3 Capsicum annuum HOM05D000141 ORTHO05D011930 4.0e-43 177.9 106 92.5
CAN.G7886.1 Capsicum annuum HOM05D000141 ORTHO05D011930 4.4e-42 174.5 104 93.3
CAN.G1784.5 Capsicum annuum HOM05D000141 ORTHO05D011930 3.1e-40 168.3 104 89.4
CAN.G2052.3 Capsicum annuum HOM05D000141 ORTHO05D011930 3.1e-40 168.3 104 89.4
CAN.G12411.1 Capsicum annuum HOM05D000141 ORTHO05D011930 9.2e-40 166.8 98 93.9
CAN.G9568.1 Capsicum annuum HOM05D000141 ORTHO05D011930 1.2e-39 166.4 104 88.5
CAN.G2301.1 Capsicum annuum HOM05D000141 ORTHO05D011930 1.1e-37 159.8 104 85.6
CAN.G2032.1 Capsicum annuum HOM05D000141 ORTHO05D000780 5.2e-35 151.0 93 89.2
CAN.G4746.2 Capsicum annuum HOM05D000141 ORTHO05D011930 2.6e-34 148.7 98 82.7
Nitab4.5_0000636g0110 Nicotiana tabacum HOM05D000141 ORTHO05D011930 3.4e-34 148.3 105 81.9
Nitab4.5_0007721g0030 Nicotiana tabacum HOM05D000141 ORTHO05D000780 4.4e-34 147.9 105 81.0
CAN.G4150.1 Capsicum annuum HOM05D000141 ORTHO05D011930 5.7e-34 147.5 89 92.1
Peaxi162Scf00130g00518 Petunia axillaris HOM05D000141 ORTHO05D000780 3.2e-32 141.7 105 78.1
CAN.G2478.4 Capsicum annuum HOM05D000141 ORTHO05D011930 2.0e-31 139.0 86 89.5
Sopen04g008170 Solanum pennellii HOM05D000141 ORTHO05D000780 2.7e-31 138.7 105 76.2
Solyc04g016080.2 Solanum lycopersicum HOM05D000141 ORTHO05D000780 5.9e-31 137.5 105 76.2
PGSC0003DMG400027257 Solanum tuberosum HOM05D000141 ORTHO05D000780 1.2e-28 129.8 104 75.0
CAN.G676.23 Capsicum annuum HOM05D000141 ORTHO05D000780 5.8e-26 120.9 79 87.3
CAN.G7460.1 Capsicum annuum HOM05D000141 ORTHO05D011930 1.7e-17 92.8 57 91.2
MD14G1074400 Malus domestica HOM05D000141 ORTHO05D000780 2.2e-17 92.4 106 55.7
Cc06_g17730 Coffea canephora HOM05D000141 ORTHO05D000780 8.3e-17 90.5 107 56.1
MD12G1076000 Malus domestica HOM05D000141 ORTHO05D000780 1.4e-16 89.7 106 55.7
Oeu062943.1 Olea europaea HOM05D000141 ORTHO05D000780 5.4e-16 87.8 106 57.5
RcHm_v2.0_Chr3g0483041 Rosa chinensis HOM05D000141 ORTHO05D000780 5.4e-16 87.8 98 58.2
Prupe.7G055800 Prunus persica HOM05D000141 ORTHO05D000780 7.1e-16 87.4 102 55.9
SalBow6G3399 Salvia bowleyana HOM05D000141 ORTHO05D000780 1.6e-15 86.3 98 55.1
SalBow6G3691 Salvia bowleyana HOM05D000141 ORTHO05D000780 1.6e-15 86.3 98 55.1
FAN09G2894 Fragaria x ananassa HOM05D000141 ORTHO05D000780 2.1e-15 85.9 98 59.2
CAN.G778.7 Capsicum annuum HOM05D000141 ORTHO05D000780 4.6e-15 84.7 49 89.8
FvH4_6g24140 Fragaria vesca HOM05D000141 ORTHO05D000780 1.0e-14 83.6 98 56.1
QL07p001610 Quercus lobata HOM05D000141 ORTHO05D000780 1.3e-14 83.2 108 54.6
Haze_19824 Corylus avellana HOM05D000141 ORTHO05D000780 2.3e-14 82.4 111 51.4
Haze_19829 Corylus avellana HOM05D000141 ORTHO05D000780 2.3e-14 82.4 111 51.4
QL05p062269 Quercus lobata HOM05D000141 ORTHO05D000780 2.3e-14 82.4 108 54.6
QL07p001657 Quercus lobata HOM05D000141 ORTHO05D011930 3.0e-14 82.0 108 53.7
FAN14G3678 Fragaria x ananassa HOM05D000141 ORTHO05D000780 3.9e-14 81.6 98 56.1
Sabra06G0033900 Salix brachista HOM05D000141 ORTHO05D000780 3.9e-14 81.6 98 56.1
Dinv39627 Davidia involucrata HOM05D000141 ORTHO05D011930 6.6e-14 80.9 86 59.3
Potri.006G048600 Populus trichocarpa HOM05D000141 ORTHO05D000780 1.1e-13 80.1 98 55.1
Rhsim04G0102700 Rhododendron simsii HOM05D000141 ORTHO05D000780 1.5e-13 79.7 92 60.9
Hma1.2p1_0788F.1_g218060 Hydrangea macrophylla HOM05D000141 ORTHO05D000780 2.5e-13 79.0 99 52.5
Manes.08G053050 Manihot esculenta HOM05D000141 ORTHO05D000780 3.3e-13 78.6 107 49.5
CiPaw.09G039400 Carya illinoinensis HOM05D000141 ORTHO05D000780 4.3e-13 78.2 103 52.4
Medtr7g091290 Medicago truncatula HOM05D000141 ORTHO05D000780 5.6e-13 77.8 105 52.4
Oeu033013.1 Olea europaea HOM05D000141 ORTHO05D000780 7.3e-13 77.4 100 51.0
TAR369G0815 Trochodendron aralioides HOM05D000141 ORTHO05D011930 9.5e-13 77.0 101 50.5
Lj1g0025747 Lotus japonicus HOM05D000141 ORTHO05D000780 1.2e-12 76.6 87 57.5
SGA_v2.0_scaffold105G30398 Striga asiatica HOM05D000141 ORTHO05D000780 1.2e-12 76.6 93 57.0
Hund24692 Selenicereus undatus HOM05D000141 ORTHO05D000780 1.6e-12 76.3 98 52.0
Eucgr.A02334 Eucalyptus grandis HOM05D000141 ORTHO05D000780 2.1e-12 75.9 108 50.0
PGR004G2467 Punica granatum HOM05D000141 ORTHO05D000780 8.1e-12 73.9 107 48.6
TWI53G1155 Tripterygium wilfordii HOM05D000141 ORTHO05D000780 8.1e-12 73.9 97 54.6
Aa31LG3G2890 Aethionema arabicum HOM05D000141 ORTHO05D000780 1.8e-11 72.8 102 52.9
TPR.G18240 Trifolium pratense HOM05D000141 ORTHO05D000780 1.8e-11 72.8 101 49.5
C05p57860 Brassica napus HOM05D000141 ORTHO05D000780 2.3e-11 72.4 91 53.8
AUR62024474 Chenopodium quinoa HOM05D000141 ORTHO05D000780 2.3e-11 72.4 90 51.1
Psat3g073920 Pisum sativum HOM05D000141 ORTHO05D000780 2.3e-11 72.4 100 50.0
AL3G21640 Arabidopsis lyrata HOM05D000141 ORTHO05D000780 3.1e-11 72.0 91 53.8
BolC5t34441H Brassica oleracea HOM05D000141 ORTHO05D000780 3.1e-11 72.0 91 53.8
GSVIVG01033252001 Vitis vinifera HOM05D000141 ORTHO05D000780 4.0e-11 71.6 105 48.6
AT3G10310 Arabidopsis thaliana HOM05D000141 ORTHO05D000780 5.2e-11 71.2 91 52.7
arahy.Tifrunner.gnm1.ann1.JU456M Arachis hypogaea HOM05D000141 ORTHO05D000780 5.2e-11 71.2 85 54.1
arahy.Tifrunner.gnm1.ann1.SFU112 Arachis hypogaea HOM05D000141 ORTHO05D000780 5.2e-11 71.2 85 54.1
A05p38830 Brassica napus HOM05D000141 ORTHO05D000780 6.8e-11 70.9 91 51.6
BraA05t22674Z Brassica rapa HOM05D000141 ORTHO05D000780 6.8e-11 70.9 91 51.6
Sp3g08570 Schrenkiella parvula HOM05D000141 ORTHO05D000780 6.8e-11 70.9 91 52.7
BcaNung06563 Brassica carinata HOM05D000141 ORTHO05D000780 8.9e-11 70.5 91 53.8
Glyma.19G137500 Glycine max HOM05D000141 ORTHO05D000780 8.9e-11 70.5 85 51.8
THA.LOC104816416 Tarenaya hassleriana HOM05D000141 ORTHO05D000780 1.2e-10 70.1 92 52.2
Carub.0003s0949 Capsella rubella HOM05D000141 ORTHO05D000780 1.5e-10 69.7 98 48.0
Glyma.03G134900 Glycine max HOM05D000141 ORTHO05D000780 1.5e-10 69.7 86 55.8
CAN.G1784.4 Capsicum annuum HOM05D000141 ORTHO05D000780 2.0e-10 69.3 43 88.4
Aqoxy2G00217 Aquilegia oxysepala HOM05D000141 ORTHO05D000780 2.6e-10 68.9 88 54.5
AUR62026063 Chenopodium quinoa HOM05D000141 ORTHO05D000780 2.6e-10 68.9 90 51.1
CsaV3_4G022100 Cucumis sativus L. HOM05D000141 ORTHO05D000780 2.6e-10 68.9 103 47.6
MELO3C020742.2 Cucumis melo HOM05D000141 ORTHO05D000780 3.4e-10 68.6 102 49.0
TWI74G1537 Tripterygium wilfordii HOM05D000141 ORTHO05D000780 3.4e-10 68.6 95 52.6
Thhalv10019993m.g Eutrema salsugineum HOM05D000141 ORTHO05D000780 5.8e-10 67.8 91 51.6
Ca_08441_v3 Cicer arietinum L. HOM05D000141 ORTHO05D000780 9.9e-10 67.0 98 50.0
THA.LOC104804702 Tarenaya hassleriana HOM05D000141 ORTHO05D000780 9.9e-10 67.0 99 45.5
COL.COLO4_20030 Corchorus olitorius HOM05D000141 ORTHO05D000780 1.7e-09 66.2 80 55.0
Migut.J01742 Erythranthe guttata HOM05D000141 ORTHO05D000780 2.9e-09 65.5 90 53.3
Lj2C386T5 Lonicera japonica HOM05D000141 ORTHO05D000780 6.4e-09 64.3 96 49.0
CSS0002874 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 1.4e-08 63.2 105 47.6
CARHR084790 Cardamine hirsuta HOM05D000141 ORTHO05D000780 1.4e-08 63.2 91 50.5
BcaC05g29478 Brassica carinata HOM05D000141 ORTHO05D000780 1.9e-08 62.8 110 43.6
Sc19g0006580 Simmondsia chinensis HOM05D000141 ORTHO05D000780 2.4e-08 62.4 106 44.3
Lalb_Chr20g0110611 Lupinus albus HOM05D000141 ORTHO05D000780 4.1e-08 61.6 84 52.4
CSS0015830 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 5.4e-08 61.2 105 46.7
CSS0033447 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 5.4e-08 61.2 106 46.2
Ciclev10004492m.g Citrus clementina HOM05D000141 ORTHO05D000780 5.4e-08 61.2 98 49.0
DCAR_013606 Daucus carota HOM05D000141 ORTHO05D000780 5.4e-08 61.2 82 48.8
Lalb_Chr25g0287241 Lupinus albus HOM05D000141 ORTHO05D000780 5.4e-08 61.2 87 48.3
VMungo1383G0247 Vigna mungo HOM05D000141 ORTHO05D000780 7.1e-08 60.8 99 46.5
Zm00001eb122340 Zea mays HOM05D000141 ORTHO05D000780 7.1e-08 60.8 99 42.4
Duzib106G2056 Durio zibethinus HOM05D000141 ORTHO05D000780 1.6e-07 59.7 89 48.3
PSO384G5070 Papaver somniferum HOM05D000141 ORTHO05D000780 1.6e-07 59.7 93 44.1
CSS0021973 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 2.1e-07 59.3 105 45.7
Thecc.05G150300 Theobroma cacao HOM05D000141 ORTHO05D000780 2.1e-07 59.3 88 50.0
BolC3t16679H Brassica oleracea HOM05D000141 ORTHO05D000780 3.5e-07 58.5 90 48.9
PSO339G3992 Papaver somniferum HOM05D000141 ORTHO05D000780 3.5e-07 58.5 93 44.1
FAN05G1533 Fragaria x ananassa HOM05D000141 ORTHO05D000780 6.0e-07 57.8 86 48.8
Os01g0243100 Oryza sativa ssp. japonica HOM05D000141 ORTHO05D000780 6.0e-07 57.8 95 45.3
Sed0021099 Sechium edule HOM05D000141 ORTHO05D000780 7.8e-07 57.4 103 43.7
ECA236G0558 Erigeron canadensis HOM05D000141 ORTHO05D000780 1.3e-06 56.6 91 47.3
Phvul.001G130300 Phaseolus vulgaris HOM05D000141 ORTHO05D000780 2.3e-06 55.8 96 44.8


User provided reference genes

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