Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1776.1 Capsicum annuum HOM05D043546 ORTHO05D000074 6.6e-125 450.7 222 100.0
CAN.G2591.1 Capsicum annuum HOM05D043546 ORTHO05D000074 1.6e-115 419.5 205 100.0
CAN.G890.14 Capsicum annuum HOM05D000151 ORTHO05D000074 2.7e-73 279.3 202 69.8
Sopen02g027950 Solanum pennellii HOM05D000151 ORTHO05D000074 4.1e-58 228.8 199 59.8
Solyc02g083190.2 Solanum lycopersicum HOM05D000151 ORTHO05D000074 5.9e-57 224.9 199 58.8
PGSC0003DMG400001547 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.4e-52 209.1 142 72.5
CAN.G890.15 Capsicum annuum HOM05D000151 ORTHO05D000074 4.4e-52 208.8 218 53.7
Peaxi162Scf00300g10017 Petunia axillaris HOM05D000151 ORTHO05D000074 1.6e-41 173.7 138 62.3
Nitab4.5_0004259g0010 Nicotiana tabacum HOM05D000151 ORTHO05D000074 3.0e-40 169.5 137 62.8
QL06p052453 Quercus lobata HOM05D000151 ORTHO05D000074 9.9e-12 74.7 150 36.0
Nitab4.5_0003585g0020 Nicotiana tabacum HOM05D001876 ORTHO05D000074 3.2e-10 69.7 125 32.0
Aqoxy6G01889 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.2e-10 69.3 134 34.3
Aqoxy6G01888 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.4e-10 68.9 137 32.1
Potri.004G179685 Populus trichocarpa HOM05D000151 ORTHO05D000074 5.4e-10 68.9 125 35.2
Sabra04G0121100 Salix brachista HOM05D000151 ORTHO05D000074 7.1e-10 68.6 125 33.6
Manes.04G069000 Manihot esculenta HOM05D000151 ORTHO05D000074 1.6e-09 67.4 127 32.3
Sabra09G0108800 Salix brachista HOM05D000151 ORTHO05D000074 1.6e-09 67.4 129 33.3
Lalb_Chr25g0283041 Lupinus albus HOM05D000151 ORTHO05D000074 6.0e-09 65.5 151 29.1
PGR142G2333 Punica granatum HOM05D000151 ORTHO05D000074 6.0e-09 65.5 188 29.3
CANSAT25G1224 Cannabis sativa HOM05D000151 ORTHO05D000074 7.9e-09 65.1 146 30.1
Potri.009G140000 Populus trichocarpa HOM05D000151 ORTHO05D000074 1.3e-08 64.3 125 33.6
Nn6g31857 Nelumbo nucifera HOM05D000151 ORTHO05D000074 2.3e-08 63.5 128 32.8
Duzib147G0484 Durio zibethinus HOM05D000151 ORTHO05D000074 5.1e-08 62.4 127 35.4
TAR628G0991 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.1e-08 62.4 128 32.0
arahy.Tifrunner.gnm1.ann1.2FAG51 Arachis hypogaea HOM05D000151 ORTHO05D000074 6.7e-08 62.0 129 31.8
PSO675G1630 Papaver somniferum HOM05D000151 ORTHO05D000074 6.7e-08 62.0 130 31.5
PGR102G1707 Punica granatum HOM05D000151 ORTHO05D000074 6.7e-08 62.0 125 32.8
Dinv12042 Davidia involucrata HOM05D000151 ORTHO05D000074 8.7e-08 61.6 132 31.8
Sp6g21720 Schrenkiella parvula HOM05D000151 ORTHO05D000074 8.7e-08 61.6 134 32.1
Eucgr.I01474 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.1e-07 61.2 125 32.0
Thhalv10022716m.g Eutrema salsugineum HOM05D000151 ORTHO05D000074 1.1e-07 61.2 126 31.0
C03p13100 Brassica napus HOM05D000151 ORTHO05D000074 1.9e-07 60.5 127 32.3
CAN.G1235.35 Capsicum annuum HOM05D000151 ORTHO05D000074 1.9e-07 60.5 128 32.0
PSO541G6252 Papaver somniferum HOM05D000151 ORTHO05D000074 1.9e-07 60.5 130 30.8
QL11p053208 Quercus lobata HOM05D000151 ORTHO05D000074 1.9e-07 60.5 125 31.2
Sp3g30320 Schrenkiella parvula HOM05D000151 ORTHO05D000074 1.9e-07 60.5 126 31.7
Potri.005G105200 Populus trichocarpa HOM05D000151 ORTHO05D000074 2.5e-07 60.1 173 30.1
Rhsim10G0203700 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.5e-07 60.1 127 32.3
Cfa005316 Carpinus fangiana HOM05D000151 ORTHO05D000074 3.3e-07 59.7 125 32.8
Medtr3g037710 Medicago truncatula HOM05D000151 ORTHO05D000074 3.3e-07 59.7 141 31.2
Sopen01g053970 Solanum pennellii HOM05D000151 ORTHO05D000074 3.3e-07 59.7 131 29.8
Aa31LG8G14220 Aethionema arabicum HOM05D000151 ORTHO05D000074 4.3e-07 59.3 129 31.8
Cpa.g.sc20.134 Carica papaya HOM05D000151 ORTHO05D000074 4.3e-07 59.3 136 32.4
RcHm_v2.0_Chr6g0279451 Rosa chinensis HOM05D000151 ORTHO05D000074 4.3e-07 59.3 126 32.5
FvH4_2g15930 Fragaria vesca HOM05D000151 ORTHO05D000074 5.6e-07 58.9 125 32.0
Ca_14445_v3 Cicer arietinum L. HOM05D000151 ORTHO05D000074 7.4e-07 58.5 128 33.6
FvH4_1g10830 Fragaria vesca HOM05D000151 ORTHO05D000074 7.4e-07 58.5 153 30.7
FAN15G2361 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.4e-07 58.5 125 32.0
FAN24G3248 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.4e-07 58.5 125 32.0
Actinidia18026 Actinidia chinensis HOM05D000151 ORTHO05D000074 9.6e-07 58.2 124 30.6
CSS0014442 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 9.6e-07 58.2 125 28.8
Dinv08540 Davidia involucrata HOM05D000151 ORTHO05D000074 9.6e-07 58.2 135 31.9
Lsat_1_v5_gn_3_47300 Lactuca sativa HOM05D004423 ORTHO05D005464 9.6e-07 58.2 127 27.6
Peaxi162Scf00362g00315 Petunia axillaris HOM05D000151 ORTHO05D000074 9.6e-07 58.2 124 33.1
Rhsim05G0163200 Rhododendron simsii HOM05D001789 ORTHO05D001755 9.6e-07 58.2 142 34.5
Rhsim05G0163300 Rhododendron simsii HOM05D001789 ORTHO05D001755 9.6e-07 58.2 125 34.4
PGSC0003DMG400018632 Solanum tuberosum HOM05D000151 ORTHO05D000074 9.6e-07 58.2 121 29.8
FAN20G3023 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.3e-06 57.8 125 31.2
Hma1.2p1_0032F.1_g018990 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 1.3e-06 57.8 128 31.2
Solyc01g111920.3 Solanum lycopersicum HOM05D000151 ORTHO05D000074 1.3e-06 57.8 123 28.5
AL3G49820 Arabidopsis lyrata HOM05D000151 ORTHO05D000074 1.6e-06 57.4 126 30.2
AT2G17030 Arabidopsis thaliana HOM05D000151 ORTHO05D000074 1.6e-06 57.4 126 30.2
Potri.005G105400 Populus trichocarpa HOM05D000151 ORTHO05D000074 1.6e-06 57.4 154 31.2
CANSAT25G3017 Cannabis sativa HOM05D000151 ORTHO05D000074 2.1e-06 57.0 135 30.4
Aqoxy7G00901 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.8e-06 56.6 146 32.2
CARHR107350 Cardamine hirsuta HOM05D000151 ORTHO05D000074 2.8e-06 56.6 129 28.7
Haze_02069 Corylus avellana HOM05D000151 ORTHO05D000074 3.6e-06 56.2 134 29.9
Lj3g0027507 Lotus japonicus HOM05D000151 ORTHO05D000074 3.6e-06 56.2 131 29.0
Psat5g209280 Pisum sativum HOM05D000151 ORTHO05D000074 3.6e-06 56.2 135 29.6
Prupe.7G176700 Prunus persica HOM05D000151 ORTHO05D000074 3.6e-06 56.2 129 33.3
Prupe.8G172400 Prunus persica HOM05D000151 ORTHO05D000074 3.6e-06 56.2 125 30.4
Actinidia20542 Actinidia chinensis HOM05D000151 ORTHO05D000074 4.8e-06 55.8 127 29.1
Duzib052G1153 Durio zibethinus HOM05D000151 ORTHO05D000074 4.8e-06 55.8 124 30.6
MD05G1128300 Malus domestica HOM05D000151 ORTHO05D000074 6.2e-06 55.5 128 29.7
Prupe.7G177000 Prunus persica HOM05D000151 ORTHO05D000074 6.2e-06 55.5 132 31.1
vmacro17118 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 6.2e-06 55.5 127 33.1
Gohir.D04G169200 Gossypium hirsutum HOM05D000151 ORTHO05D000074 8.1e-06 55.1 129 28.7
Manes.01G152400 Manihot esculenta HOM05D000151 ORTHO05D000074 8.1e-06 55.1 125 30.4
Rhsim11G0195100 Rhododendron simsii HOM05D000151 ORTHO05D000074 8.1e-06 55.1 125 28.8
SHI05785 Sapria himalayana HOM05D000151 ORTHO05D000074 8.1e-06 55.1 125 28.0


User provided reference genes

Program Settings