Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 3.9e-251 870.9 421 100.0
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 2.1e-228 795.4 421 89.3
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 2.3e-227 792.0 421 88.6
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 7.4e-226 786.9 421 88.4
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 1.2e-215 753.1 430 82.6
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.2e-212 743.0 422 85.3
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 6.1e-212 740.7 430 83.3
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 1.7e-190 669.5 426 73.2
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 1.7e-190 669.5 426 73.2
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 2.6e-186 655.6 427 70.7
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 8.3e-185 650.6 424 71.5
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 1.4e-184 649.8 420 72.4
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 7.0e-184 647.5 421 72.7
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 9.2e-184 647.1 420 72.6
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 3.5e-183 645.2 422 71.1
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 4.6e-183 644.8 424 71.0
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 2.3e-182 642.5 421 72.2
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.9e-182 641.7 421 71.7
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 1.5e-181 639.8 421 71.5
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 1.9e-181 639.4 421 71.5
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 2.5e-181 639.0 427 68.9
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 2.5e-181 639.0 427 68.9
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 7.3e-181 637.5 422 71.3
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 1.6e-180 636.3 421 71.0
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 4.7e-180 634.8 421 69.6
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 8.0e-180 634.0 422 70.4
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 8.0e-180 634.0 424 69.8
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.8e-179 632.9 423 69.5
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 1.8e-179 632.9 426 69.7
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 4.0e-179 631.7 424 69.3
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 5.2e-179 631.3 423 69.3
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 5.2e-179 631.3 424 69.8
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 8.9e-179 630.6 425 67.3
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 8.9e-179 630.6 424 69.3
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 8.9e-179 630.6 424 68.9
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 1.2e-178 630.2 422 68.7
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 2.0e-178 629.4 423 69.0
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.0e-178 629.4 423 69.3
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 2.0e-178 629.4 421 69.6
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.6e-178 629.0 423 69.0
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 2.6e-178 629.0 425 68.2
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 3.4e-178 628.6 425 69.4
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 4.4e-178 628.2 429 68.1
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 4.4e-178 628.2 429 67.4
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 9.8e-178 627.1 427 69.3
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 9.8e-178 627.1 426 67.6
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 2.2e-177 625.9 426 69.7
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 2.2e-177 625.9 430 67.7
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 2.9e-177 625.5 426 69.2
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 4.9e-177 624.8 424 67.9
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 6.4e-177 624.4 424 69.6
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 8.3e-177 624.0 427 68.6
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 1.1e-176 623.6 430 68.1
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 1.1e-176 623.6 425 68.5
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 1.4e-176 623.2 424 68.6
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 4.1e-176 621.7 426 68.5
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 7.0e-176 620.9 419 69.9
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 2.0e-175 619.4 425 66.6
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 3.5e-175 618.6 419 68.7
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 1.0e-174 617.1 430 67.7
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 1.3e-174 616.7 429 69.7
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 3.0e-174 615.5 421 69.6
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 5.0e-174 614.8 408 70.6
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 6.6e-174 614.4 421 68.6
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 6.6e-174 614.4 424 67.0
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 1.5e-173 613.2 423 68.6
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 1.2e-172 610.1 426 66.7
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 1.6e-172 609.8 421 65.8
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 2.3e-171 605.9 419 68.7
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 4.0e-171 605.1 427 68.4
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 2.6e-170 602.4 418 67.7
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 9.9e-170 600.5 416 66.6
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 6.4e-169 597.8 426 66.0
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 6.4e-169 597.8 352 75.0
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 6.4e-169 597.8 417 66.9
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 5.4e-168 594.7 421 67.7
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 7.1e-168 594.3 415 68.0
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 9.2e-168 594.0 415 68.0
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 1.6e-167 593.2 355 74.1
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 1.6e-167 593.2 428 63.8
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 2.1e-167 592.8 415 67.5
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 2.1e-167 592.8 345 77.1
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.5e-167 592.0 421 68.2
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 7.8e-167 590.9 433 67.0
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 1.3e-166 590.1 415 67.2
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 6.6e-166 587.8 415 67.0
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 3.3e-165 585.5 417 66.7
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 3.3e-165 585.5 416 65.1
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 4.3e-165 585.1 415 66.3
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 4.3e-165 585.1 415 66.3
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 1.2e-164 583.6 416 66.3
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 1.6e-164 583.2 430 64.0
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 1.6e-164 583.2 334 77.2
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 2.1e-164 582.8 416 66.3
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 3.6e-164 582.0 428 64.0
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 8.1e-164 580.9 420 64.8
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 8.1e-164 580.9 426 64.6
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 6.8e-163 577.8 383 68.1
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 9.9e-162 573.9 426 63.4
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.7e-161 573.2 416 65.4
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 2.9e-161 572.4 427 62.5
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 2.9e-161 572.4 334 76.6
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 2.4e-160 569.3 349 72.5
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 2.7e-159 565.8 352 71.0
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 3.5e-159 565.5 358 69.8
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 9.6e-157 557.4 379 66.8
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 2.1e-156 556.2 398 67.3
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 6.9e-155 551.2 412 63.1
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 9.9e-154 547.4 417 62.1
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 2.2e-153 546.2 422 61.8
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 1.0e-150 537.3 360 67.5
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.1e-149 533.9 434 60.8
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 1.9e-141 506.5 357 64.1
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 6.9e-139 498.0 281 77.6
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 2.2e-137 493.0 420 56.0
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 2.9e-137 492.7 281 75.4
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 3.1e-131 472.6 409 55.3
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 2.6e-130 469.5 353 61.5
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 1.6e-119 433.7 322 65.5
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 4.8e-100 369.0 216 75.9
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 9.1e-99 364.8 412 47.1
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 4.5e-98 362.5 209 76.6
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 9.4e-96 354.8 209 73.7
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 2.7e-90 336.7 314 51.9
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 4.1e-59 233.0 266 49.6
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 1.3e-52 211.5 414 37.7
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 2.0e-29 134.4 93 58.1
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 1.8e-25 121.3 86 67.4
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 2.5e-24 117.5 80 67.5
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.6e-18 98.2 118 45.8


User provided reference genes

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