Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1753.2 Capsicum annuum HOM05D004570 ORTHO05D005494 3.3e-47 191.4 102 100.0
CAN.G1148.10 Capsicum annuum HOM05D004570 ORTHO05D005494 1.4e-40 169.5 102 89.2
CAN.G1314.4 Capsicum annuum HOM05D004570 ORTHO05D005494 1.4e-40 169.5 102 89.2
CAN.G2018.14 Capsicum annuum HOM05D004570 ORTHO05D005494 1.4e-40 169.5 102 89.2
CAN.G2018.6 Capsicum annuum HOM05D004570 ORTHO05D005494 1.4e-40 169.5 102 89.2
CAN.G3365.4 Capsicum annuum HOM05D004570 ORTHO05D005494 1.4e-40 169.5 102 89.2
CAN.G438.84 Capsicum annuum HOM05D004570 ORTHO05D005494 1.4e-40 169.5 102 89.2
Solyc00g500022.1 Solanum lycopersicum HOM05D004570 ORTHO05D005494 1.4e-40 169.5 102 89.2
Sopen07g012410 Solanum pennellii HOM05D004570 ORTHO05D005494 1.4e-40 169.5 102 89.2
PGSC0003DMG400044817 Solanum tuberosum HOM05D004570 ORTHO05D005494 1.4e-40 169.5 102 89.2
PGSC0003DMG400045454 Solanum tuberosum HOM05D004570 ORTHO05D005494 1.4e-40 169.5 102 89.2
PGSC0003DMG401022617 Solanum tuberosum HOM05D004570 ORTHO05D005494 1.4e-40 169.5 102 89.2
CAN.G561.9 Capsicum annuum HOM05D004570 ORTHO05D005494 1.2e-39 166.4 102 88.2
DCAR_032506 Daucus carota HOM05D004570 ORTHO05D005494 2.4e-37 158.7 102 83.3
Gohir.A11G230402 Gossypium hirsutum HOM05D004570 ORTHO05D005494 3.8e-35 151.4 102 80.4
Nn021s41531 Nelumbo nucifera HOM05D004570 ORTHO05D005494 5.0e-35 151.0 102 80.4
Nn3g19985 Nelumbo nucifera HOM05D004570 ORTHO05D005494 5.0e-35 151.0 102 80.4
MELO3C001309.2 Cucumis melo HOM05D004570 ORTHO05D005494 6.5e-35 150.6 102 80.4
MELO3C028029.2 Cucumis melo HOM05D004570 ORTHO05D005494 6.5e-35 150.6 102 80.4
MELO3C028120.2 Cucumis melo HOM05D004570 ORTHO05D005494 6.5e-35 150.6 102 80.4
Gohir.A12G229466 Gossypium hirsutum HOM05D004570 ORTHO05D005494 6.5e-35 150.6 102 80.4
Gorai.010G129700 Gossypium raimondii HOM05D004570 ORTHO05D005494 6.5e-35 150.6 102 80.4
PSO548G0082 Papaver somniferum HOM05D004570 ORTHO05D005494 6.5e-35 150.6 102 80.4
RcHm_v2.0_CPg0502011 Rosa chinensis HOM05D004570 ORTHO05D005494 8.5e-35 150.2 102 80.4
C06p22960 Brassica napus HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
BolSC29t60597H Brassica oleracea HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
BolSC35t60657H Brassica oleracea HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
BolSC46t61008H Brassica oleracea HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
BraA06t25415Z Brassica rapa HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
BraSC138t45566Z Brassica rapa HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
BraSC25t45856Z Brassica rapa HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
BraSC58t46431Z Brassica rapa HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
HanXRQChr01g0004801 Helianthus annuus HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
HanXRQChr01g0020301 Helianthus annuus HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
HanXRQChr02g0041611 Helianthus annuus HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
HanXRQChr02g0044851 Helianthus annuus HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
HanXRQChr10g0283601 Helianthus annuus HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
HanXRQChr10g0284291 Helianthus annuus HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
HanXRQChr10g0289311 Helianthus annuus HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
HanXRQChr10g0318151 Helianthus annuus HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
HanXRQChr11g0326881 Helianthus annuus HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
HanXRQCPg0580091 Helianthus annuus HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 78.4
PGR111G0035 Punica granatum HOM05D004570 ORTHO05D005494 1.1e-34 149.8 102 80.4
HanXRQChr04g0095121 Helianthus annuus HOM05D004570 ORTHO05D005494 1.5e-34 149.4 102 78.4
Sed0017454 Sechium edule HOM05D004570 ORTHO05D005494 2.5e-34 148.7 102 79.4
C02p28720 Brassica napus HOM05D004570 ORTHO05D005494 3.2e-34 148.3 102 78.4
C06p23030 Brassica napus HOM05D004570 ORTHO05D005494 3.2e-34 148.3 102 77.5
BolC2t08922H Brassica oleracea HOM05D004570 ORTHO05D005494 3.2e-34 148.3 102 78.4
HanXRQChr04g0094281 Helianthus annuus HOM05D004570 ORTHO05D005494 3.2e-34 148.3 102 77.5
RcHm_v2.0_Chr6g0260411 Rosa chinensis HOM05D004570 ORTHO05D005494 3.2e-34 148.3 102 80.4
BolSC47t61087H Brassica oleracea HOM05D004570 ORTHO05D005494 4.2e-34 147.9 99 78.8
TAR628G1502 Trochodendron aralioides HOM05D004570 ORTHO05D005494 4.2e-34 147.9 100 80.0
ATCG00650 Arabidopsis thaliana HOM05D004570 ORTHO05D005494 1.6e-33 146.0 102 77.5
CARHR282160 Cardamine hirsuta HOM05D004570 ORTHO05D005494 1.6e-33 146.0 102 77.5
Gohir.A04G059000 Gossypium hirsutum HOM05D004570 ORTHO05D005494 2.7e-33 145.2 102 78.4
Gohir.D12G107900 Gossypium hirsutum HOM05D004570 ORTHO05D005494 8.0e-33 143.7 102 77.5
AL2G21620 Arabidopsis lyrata HOM05D004570 ORTHO05D005494 2.3e-32 142.1 102 76.5
Gohir.A09G109900 Gossypium hirsutum HOM05D004570 ORTHO05D005494 6.8e-32 140.6 102 74.5
Lalb_Chr07g0192071 Lupinus albus HOM05D004570 ORTHO05D005494 1.2e-31 139.8 94 79.8
Ciclev10003202m.g Citrus clementina HOM05D004570 ORTHO05D005494 2.0e-31 139.0 102 74.5
BolC6t36198H Brassica oleracea HOM05D004570 ORTHO05D005494 2.6e-31 138.7 102 74.5
Gorai.001G196600 Gossypium raimondii HOM05D004570 ORTHO05D005494 2.6e-31 138.7 102 75.5
Phvul.002G090511 Phaseolus vulgaris HOM05D004570 ORTHO05D005494 1.3e-30 136.3 101 70.3
Lj1g0020553 Lotus japonicus HOM05D004570 ORTHO05D005494 2.2e-30 135.6 105 74.3
LjContig00318g0015790 Lotus japonicus HOM05D004570 ORTHO05D005494 2.2e-30 135.6 105 74.3
BolSC49t61173H Brassica oleracea HOM05D004570 ORTHO05D005494 1.4e-29 132.9 101 71.3
Glyma.15G238900 Glycine max HOM05D004570 ORTHO05D005494 1.4e-29 132.9 100 72.0
Glyma.12G232200 Glycine max HOM05D004570 ORTHO05D005494 4.1e-29 131.3 90 76.7
Gohir.D06G113675 Gossypium hirsutum HOM05D004570 ORTHO05D005494 2.0e-28 129.0 82 84.1
arahy.Tifrunner.gnm1.ann1.0J98KG Arachis hypogaea HOM05D004570 ORTHO05D005494 8.0e-25 117.1 88 73.9
arahy.Tifrunner.gnm1.ann1.JZHZ2W Arachis hypogaea HOM05D004570 ORTHO05D005494 8.0e-25 117.1 88 73.9
Lalb_Chr23g0274341 Lupinus albus HOM05D004570 ORTHO05D005494 2.3e-24 115.5 86 75.6
Gohir.A01G178208 Gossypium hirsutum HOM05D004570 ORTHO05D005494 5.7e-23 110.9 89 67.4
Gohir.A01G178244 Gossypium hirsutum HOM05D004570 ORTHO05D005494 6.3e-22 107.5 89 66.3
Hund04053 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund07983 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund08573 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund08807 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund20237 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund22775 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund27463 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund27482 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund27573 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund27596 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund27877 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund27896 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund27980 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund28050 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund28104 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund28263 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund28454 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund28470 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund28489 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund28514 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund28525 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund28627 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund28673 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund28719 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund28741 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund28753 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund28842 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund28891 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund29139 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund29177 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund29360 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund29465 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund29622 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund29704 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund29708 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund29718 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund29725 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund29808 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund29832 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund29833 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund29856 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund29864 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund29940 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund30026 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund30252 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund30318 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund30479 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund30523 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Hund30577 Selenicereus undatus HOM05D004570 ORTHO05D005494 3.1e-21 105.1 83 69.9
Solyc01g017085.1 Solanum lycopersicum HOM05D004570 ORTHO05D005494 3.1e-21 105.1 94 63.8
Medtr4g051350 Medicago truncatula HOM05D004570 ORTHO05D009532 7.0e-21 104.0 92 64.1
HanXRQChr00c0314g0573531 Helianthus annuus HOM05D004570 ORTHO05D005494 1.0e-19 100.1 70 77.1
HanXRQChr02g0052581 Helianthus annuus HOM05D004570 ORTHO05D005494 1.0e-19 100.1 70 77.1
Gohir.D01G101982 Gossypium hirsutum HOM05D004570 ORTHO05D005494 1.7e-19 99.4 70 77.1
Gohir.A04G042801 Gossypium hirsutum HOM05D004570 ORTHO05D005494 2.3e-19 99.0 68 76.5
BNapus_Darmor_BZH_scaffold_287p00190 Brassica napus HOM05D004570 ORTHO05D005494 2.9e-19 98.6 70 75.7
C02p43580 Brassica napus HOM05D004570 ORTHO05D005494 2.9e-19 98.6 70 75.7
BolSC29t60476H Brassica oleracea HOM05D004570 ORTHO05D005494 2.9e-19 98.6 70 75.7
Lj2P1239T137 Lonicera japonica HOM05D004570 ORTHO05D005494 5.0e-19 97.8 122 51.6
Hund15803 Selenicereus undatus HOM05D004570 ORTHO05D005494 5.0e-19 97.8 83 63.9
Gorai.001G063400 Gossypium raimondii HOM05D004570 ORTHO05D005494 1.1e-18 96.7 70 75.7
Lj2P1237T61 Lonicera japonica HOM05D004570 ORTHO05D005494 1.1e-18 96.7 120 51.7
Gorai.006G063400 Gossypium raimondii HOM05D004570 ORTHO05D005494 1.9e-18 95.9 68 75.0
Eucgr.E01044 Eucalyptus grandis HOM05D004570 ORTHO05D005494 4.3e-18 94.7 70 74.3
Eucgr.A00291 Eucalyptus grandis HOM05D004570 ORTHO05D005494 7.3e-18 94.0 62 79.0
EL10Ac7g17378 Beta vulgaris HOM05D004570 ORTHO05D005494 9.5e-18 93.6 60 80.0
HanXRQChr11g0345201 Helianthus annuus HOM05D004570 ORTHO05D005494 1.0e-16 90.1 59 78.0
Os01g0523401 Oryza sativa ssp. japonica HOM05D004570 ORTHO05D005494 5.2e-16 87.8 86 59.3
Zm00001eb435160 Zea mays HOM05D004570 ORTHO05D005494 6.8e-16 87.4 72 69.4
Zm00001eb437170 Zea mays HOM05D004570 ORTHO05D005494 6.8e-16 87.4 72 69.4
Gorai.013G170400 Gossypium raimondii HOM05D004570 ORTHO05D005494 2.6e-15 85.5 59 78.0
Lalb_Chr18g0049721 Lupinus albus HOM05D004570 ORTHO05D005494 1.3e-14 83.2 54 79.6
arahy.Tifrunner.gnm1.ann1.S91IH0 Arachis hypogaea HOM05D004570 ORTHO05D005494 3.7e-14 81.6 55 78.2
CSS0008162 Camellia sinensis var. sinensis HOM05D004570 ORTHO05D005494 1.8e-13 79.3 53 79.2
CsaV3_7G024620 Cucumis sativus L. HOM05D004570 ORTHO05D005494 3.2e-13 78.6 84 59.5
Lalb_Chr23g0274801 Lupinus albus HOM05D004570 ORTHO05D005494 4.1e-13 78.2 56 73.2
Lalb_Chr20g0115501 Lupinus albus HOM05D004570 ORTHO05D005494 2.7e-12 75.5 59 71.2
BraSC103t45456Z Brassica rapa HOM05D004570 ORTHO05D005494 4.6e-12 74.7 81 59.3
GSVIVG01023557001 Vitis vinifera HOM05D000092 ORTHO05D000042 4.6e-12 74.7 59 71.2
BolC9t53164H Brassica oleracea HOM05D004570 ORTHO05D005494 3.0e-11 72.0 48 77.1
BolC8t52433H Brassica oleracea HOM05D004570 ORTHO05D005494 3.9e-11 71.6 41 87.8
BraSC58t46492Z Brassica rapa HOM05D004570 ORTHO05D005494 5.0e-11 71.2 45 80.0
BolC4t25866H Brassica oleracea HOM05D004570 ORTHO05D005494 3.1e-08 62.0 37 83.8
arahy.Tifrunner.gnm1.ann1.RCVY9V Arachis hypogaea HOM05D000540 ORTHO05D000681 1.7e-06 56.2 40 72.5
arahy.Tifrunner.gnm1.ann1.IY5TEH Arachis hypogaea HOM05D011450 ORTHO05D011017 2.2e-06 55.8 46 65.2


User provided reference genes

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