Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 3.2e-173 611.7 314 100.0
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 1.2e-164 583.2 312 94.9
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 8.4e-150 533.9 277 98.6
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 2.5e-141 505.8 310 83.9
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 1.1e-138 496.9 308 82.1
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 1.1e-136 490.3 313 82.4
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 4.5e-135 485.0 313 81.2
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 1.8e-128 463.0 315 77.5
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 7.2e-125 451.1 241 95.4
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 2.6e-82 309.7 196 79.6
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 7.5e-82 308.1 216 75.5
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 8.3e-81 304.7 306 53.9
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 1.3e-78 297.4 308 53.2
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 1.3e-78 297.4 173 90.2
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 3.6e-76 289.3 314 49.0
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 2.0e-74 283.5 308 51.3
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 4.4e-74 282.3 307 50.2
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 4.4e-74 282.3 314 48.4
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 4.4e-74 282.3 165 88.5
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 1.6e-71 273.9 307 49.5
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 3.5e-71 272.7 310 47.4
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 4.6e-71 272.3 314 46.8
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 5.1e-70 268.9 322 48.1
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 5.1e-70 268.9 315 48.3
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 1.1e-69 267.7 312 49.0
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 4.3e-69 265.8 310 46.5
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 4.3e-69 265.8 346 44.2
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 5.6e-69 265.4 315 48.3
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 7.3e-69 265.0 310 46.8
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 2.1e-68 263.5 313 47.9
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 8.1e-68 261.5 317 48.9
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 1.8e-67 260.4 314 47.1
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 6.8e-67 258.5 312 45.2
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 8.9e-67 258.1 316 44.3
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 7.6e-66 255.0 318 45.9
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 1.7e-65 253.8 313 47.6
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 8.4e-65 251.5 312 43.9
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.4e-64 250.8 312 43.6
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 7.1e-64 248.4 312 44.2
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.2e-63 247.7 328 42.7
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 7.8e-63 245.0 317 45.1
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 7.8e-63 245.0 313 46.6
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 2.3e-62 243.4 313 47.0
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 7.3e-61 238.4 127 96.9
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 1.6e-60 237.3 315 44.4
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 2.1e-60 236.9 310 43.5
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 2.1e-60 236.9 308 43.8
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 1.1e-59 234.6 314 43.6
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 1.1e-59 234.6 311 43.7
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 1.8e-59 233.8 308 43.5
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 3.1e-59 233.0 319 43.9
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 4.0e-59 232.6 308 44.2
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 1.2e-58 231.1 417 37.2
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 2.6e-58 229.9 305 42.6
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 8.4e-57 224.9 291 46.7
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 1.1e-56 224.6 295 44.7
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 4.2e-56 222.6 329 43.8
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 5.4e-56 222.2 308 42.9
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 1.2e-55 221.1 311 42.4
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 3.5e-55 219.5 112 99.1
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 3.5e-55 219.5 311 42.4
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 3.9e-54 216.1 315 42.9
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 3.9e-54 216.1 311 40.5
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 2.5e-53 213.4 311 39.2
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 3.3e-53 213.0 318 40.9
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 3.3e-53 213.0 306 41.5
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 2.1e-52 210.3 294 42.5
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 2.8e-52 209.9 307 41.4
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 6.9e-51 205.3 306 40.8
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 9.0e-51 204.9 316 40.2
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 2.6e-50 203.4 351 38.5
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 1.3e-49 201.1 310 41.3
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 1.7e-49 200.7 316 39.9
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 3.8e-49 199.5 309 38.2
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 6.4e-49 198.7 288 38.5
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 1.1e-48 198.0 306 40.8
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 1.4e-48 197.6 308 38.3
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 5.5e-48 195.7 309 39.2
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 2.1e-47 193.7 311 39.5
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 7.9e-47 191.8 308 38.0
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 7.9e-47 191.8 306 35.9
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 7.9e-47 191.8 303 37.3
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 5.1e-46 189.1 186 50.5
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 5.1e-46 189.1 313 37.7
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 8.7e-46 188.3 314 39.5
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 3.3e-45 186.4 314 36.6
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 7.4e-45 185.3 311 37.3
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 7.4e-45 185.3 314 37.3
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 9.6e-45 184.9 314 36.3
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 1.3e-44 184.5 310 37.1
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 1.3e-44 184.5 306 37.3
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 1.6e-44 184.1 331 33.5
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 2.1e-44 183.7 310 36.8
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 3.7e-44 183.0 319 37.0
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 1.1e-43 181.4 311 37.0
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 1.8e-43 180.6 311 36.0
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 3.1e-43 179.9 306 35.6
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 5.3e-43 179.1 308 35.7
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 5.3e-43 179.1 201 49.8
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 9.0e-43 178.3 314 35.4
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 1.5e-42 177.6 310 39.4
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 2.0e-42 177.2 315 36.2
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 3.4e-42 176.4 314 36.6
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 1.0e-41 174.9 316 37.3
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 2.2e-41 173.7 308 36.4
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 3.8e-41 172.9 314 35.0
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 3.8e-41 172.9 259 40.5
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 2.5e-40 170.2 312 35.6
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 1.6e-39 167.5 335 33.7
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 2.1e-39 167.2 323 35.0
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 1.5e-37 161.0 294 36.1
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 4.3e-37 159.5 210 47.1
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 2.8e-36 156.8 272 36.4
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 4.8e-36 156.0 190 45.8
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 3.1e-35 153.3 221 38.0
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 1.2e-34 151.4 285 36.8
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 1.5e-34 151.0 163 50.3
Sopen12g008240 Solanum pennellii HOM05D005675 ORTHO05D006884 3.0e-30 136.7 94 72.3
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 2.5e-29 133.7 265 36.6
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 2.5e-29 133.7 265 36.6
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 2.5e-29 133.7 265 36.6
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 9.7e-29 131.7 216 37.5
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 8.2e-28 128.6 156 44.9
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 2.6e-26 123.6 246 37.0
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 1.3e-25 121.3 226 37.2
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 5.3e-19 99.4 217 30.9
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 1.5e-18 97.8 250 30.4
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 2.0e-18 97.4 235 28.9
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 3.2e-16 90.1 208 29.3
CARHR085100 Cardamine hirsuta HOM05D005675 ORTHO05D006884 5.5e-16 89.4 93 51.6
AagrBONN_evm.TU.Sc2ySwM_228.2452 Anthoceros agrestis HOM05D034800 ORTHO05D006884 2.3e-14 84.0 183 27.3
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 9.7e-13 78.6 236 27.1
BcaB04g18591 Brassica carinata HOM05D000144 ORTHO05D006884 2.1e-07 60.8 203 29.1
SEGI_30577 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 3.6e-07 60.1 104 35.6
AagrBONN_evm.TU.Sc2ySwM_344.4450 Anthoceros agrestis HOM05D034800 ORTHO05D006884 2.3e-06 57.4 211 24.2
CSS0044900 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 2.3e-06 57.4 66 48.5


User provided reference genes

Program Settings