Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G175.13 Capsicum annuum HOM05D006364 ORTHO05D007968 7.4e-46 186.8 92 100.0
CAN.G689.14 Capsicum annuum HOM05D006364 ORTHO05D007968 1.5e-43 179.1 92 94.6
Solyc04g071180.3 Solanum lycopersicum HOM05D006364 ORTHO05D007968 3.4e-43 177.9 92 94.6
Sopen04g027130 Solanum pennellii HOM05D006364 ORTHO05D007968 3.4e-43 177.9 92 94.6
Nitab4.5_0000152g0370 Nicotiana tabacum HOM05D006364 ORTHO05D007968 2.2e-42 175.3 92 93.5
Nitab4.5_0003130g0060 Nicotiana tabacum HOM05D006364 ORTHO05D007968 2.2e-42 175.3 92 93.5
PGSC0003DMG400008613 Solanum tuberosum HOM05D006364 ORTHO05D007968 6.5e-42 173.7 92 91.3
Rhsim02G0000900 Rhododendron simsii HOM05D006364 ORTHO05D007968 1.1e-41 172.9 92 88.0
Duzib212G0576 Durio zibethinus HOM05D006364 ORTHO05D007968 5.5e-41 170.6 92 89.1
Cpa.g.sc146.52 Carica papaya HOM05D006364 ORTHO05D007968 1.6e-40 169.1 92 87.0
Gohir.A02G086100 Gossypium hirsutum HOM05D006364 ORTHO05D007968 2.1e-40 168.7 92 88.0
Gohir.D02G062300 Gossypium hirsutum HOM05D006364 ORTHO05D007968 2.1e-40 168.7 92 88.0
Gorai.005G070100 Gossypium raimondii HOM05D006364 ORTHO05D007968 2.1e-40 168.7 92 88.0
Thecc.04G308800 Theobroma cacao HOM05D006364 ORTHO05D007968 2.1e-40 168.7 92 88.0
Peaxi162Scf00126g01328 Petunia axillaris HOM05D006364 ORTHO05D007968 2.7e-40 168.3 92 90.2
COL.COLO4_34533 Corchorus olitorius HOM05D006364 ORTHO05D007968 7.9e-40 166.8 92 87.0
QL06p013601 Quercus lobata HOM05D006364 ORTHO05D007968 1.4e-39 166.0 91 85.7
Duzib151G1172 Durio zibethinus HOM05D006364 ORTHO05D007968 1.8e-39 165.6 87 89.7
Dinv15615 Davidia involucrata HOM05D006364 ORTHO05D007968 2.3e-39 165.2 92 85.9
TWI73G0896 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 3.0e-39 164.9 92 83.7
GSVIVG01017645001 Vitis vinifera HOM05D006364 ORTHO05D007968 3.0e-39 164.9 92 85.9
Cc03_g00390 Coffea canephora HOM05D006364 ORTHO05D007968 3.9e-39 164.5 89 87.6
CSS0027206 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 5.2e-39 164.1 92 84.8
Nn3g21850 Nelumbo nucifera HOM05D006364 ORTHO05D007968 5.2e-39 164.1 92 84.8
Actinidia02518 Actinidia chinensis HOM05D006364 ORTHO05D007968 8.8e-39 163.3 92 84.8
Hma1.2p1_0013F.1_g008050 Hydrangea macrophylla HOM05D006364 ORTHO05D007968 8.8e-39 163.3 92 85.9
Sed0012877 Sechium edule HOM05D006364 ORTHO05D007968 1.5e-38 162.5 92 84.8
THA.LOC104820323 Tarenaya hassleriana HOM05D006364 ORTHO05D007968 1.5e-38 162.5 92 83.7
Eucgr.H04093 Eucalyptus grandis HOM05D006364 ORTHO05D007968 2.0e-38 162.2 92 84.8
EL10Ac1g00595 Beta vulgaris HOM05D006364 ORTHO05D007968 2.6e-38 161.8 89 85.4
Haze_00814 Corylus avellana HOM05D006364 ORTHO05D007968 2.6e-38 161.8 92 85.9
Actinidia31587 Actinidia chinensis HOM05D006364 ORTHO05D007968 5.7e-38 160.6 92 83.7
MSTRG.26303 Avicennia marina HOM05D006364 ORTHO05D007968 5.7e-38 160.6 91 83.5
CsaV3_3G015430 Cucumis sativus L. HOM05D006364 ORTHO05D007968 5.7e-38 160.6 92 81.5
HPP92_017027 Vanilla planifolia HOM05D006364 ORTHO05D007968 5.7e-38 160.6 88 86.4
RcHm_v2.0_Chr4g0426541 Rosa chinensis HOM05D006364 ORTHO05D007968 7.4e-38 160.2 89 84.3
CSS0032087 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 1.7e-37 159.1 92 83.7
HanXRQChr09g0252081 Helianthus annuus HOM05D006364 ORTHO05D007968 2.2e-37 158.7 88 86.4
Glyma.15G136600 Glycine max HOM05D006364 ORTHO05D007968 2.8e-37 158.3 89 84.3
Phvul.006G121400 Phaseolus vulgaris HOM05D006364 ORTHO05D007968 2.8e-37 158.3 89 84.3
Psat1g163400 Pisum sativum HOM05D006364 ORTHO05D007968 2.8e-37 158.3 89 83.1
Hund19242 Selenicereus undatus HOM05D006364 ORTHO05D007968 2.8e-37 158.3 92 81.5
CANSAT78G0762 Cannabis sativa HOM05D006364 ORTHO05D007968 4.8e-37 157.5 92 82.6
Medtr2g032700 Medicago truncatula HOM05D006364 ORTHO05D007968 6.3e-37 157.1 89 80.9
MELO3C006742.2 Cucumis melo HOM05D006364 ORTHO05D007968 8.2e-37 156.8 92 79.3
Prupe.1G110000 Prunus persica HOM05D006364 ORTHO05D007968 8.2e-37 156.8 88 84.1
Aa31LG8G4220 Aethionema arabicum HOM05D006364 ORTHO05D007968 1.1e-36 156.4 92 80.4
ECA246G0645 Erigeron canadensis HOM05D006364 ORTHO05D007968 1.1e-36 156.4 88 84.1
Lj7E712T1 Lonicera japonica HOM05D006364 ORTHO05D007968 1.1e-36 156.4 87 83.9
CDE11G0289 Ceratophyllum demersum HOM05D006364 ORTHO05D007968 1.4e-36 156.0 88 81.8
PGR004G1259 Punica granatum HOM05D006364 ORTHO05D007968 1.4e-36 156.0 92 81.5
FvH4_4g21000 Fragaria vesca HOM05D006364 ORTHO05D007968 1.8e-36 155.6 89 82.0
FAN12G1354 Fragaria x ananassa HOM05D000037 ORTHO05D001684 1.8e-36 155.6 89 82.0
Glyma.09G031500 Glycine max HOM05D006364 ORTHO05D007968 1.8e-36 155.6 92 80.4
Migut.B01021 Erythranthe guttata HOM05D006364 ORTHO05D007968 2.4e-36 155.2 91 80.2
Migut.N00017 Erythranthe guttata HOM05D006364 ORTHO05D007968 2.4e-36 155.2 91 80.2
Lalb_Chr18g0058441 Lupinus albus HOM05D006364 ORTHO05D007968 2.4e-36 155.2 89 82.0
MD16G1140400 Malus domestica HOM05D006364 ORTHO05D007968 2.4e-36 155.2 92 80.4
Sp3g15490 Schrenkiella parvula HOM05D006364 ORTHO05D007968 2.4e-36 155.2 92 81.5
TPR.G30811 Trifolium pratense HOM05D006364 ORTHO05D007968 2.4e-36 155.2 89 82.0
arahy.Tifrunner.gnm1.ann1.28BCJ9 Arachis hypogaea HOM05D006364 ORTHO05D007968 4.1e-36 154.5 89 80.9
arahy.Tifrunner.gnm1.ann1.8W9CKH Arachis hypogaea HOM05D006364 ORTHO05D007968 4.1e-36 154.5 89 80.9
arahy.Tifrunner.gnm1.ann1.ZVI86Q Arachis hypogaea HOM05D006364 ORTHO05D007968 4.1e-36 154.5 89 80.9
CiPaw.01G113600 Carya illinoinensis HOM05D006364 ORTHO05D007968 4.1e-36 154.5 89 83.1
Potri.010G152100 Populus trichocarpa HOM05D006364 ORTHO05D007968 9.1e-36 153.3 92 79.3
Aqoxy2G02602 Aquilegia oxysepala HOM05D006364 ORTHO05D007968 1.2e-35 152.9 92 82.6
AL3G30350 Arabidopsis lyrata HOM05D006364 ORTHO05D007968 1.6e-35 152.5 92 80.4
AT3G17300 Arabidopsis thaliana HOM05D006364 ORTHO05D007968 1.6e-35 152.5 92 80.4
Carub.0003s1701 Capsella rubella HOM05D006364 ORTHO05D007968 1.6e-35 152.5 92 80.4
Zm00001eb028690 Zea mays HOM05D006364 ORTHO05D007968 1.6e-35 152.5 88 81.8
BcaB04g18937 Brassica carinata HOM05D006364 ORTHO05D007968 3.5e-35 151.4 92 79.3
BcaB04g20848 Brassica carinata HOM05D006364 ORTHO05D007968 3.5e-35 151.4 92 79.3
A03p40140 Brassica napus HOM05D006364 ORTHO05D007968 3.5e-35 151.4 92 79.3
BraA03t13164Z Brassica rapa HOM05D006364 ORTHO05D007968 3.5e-35 151.4 92 79.3
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 3.5e-35 151.4 84 84.5
DCAR_026961 Daucus carota HOM05D006364 ORTHO05D007968 3.5e-35 151.4 89 77.5
Lj6g0013185 Lotus japonicus HOM05D006364 ORTHO05D007968 4.5e-35 151.0 89 80.9
Os12g0566100 Oryza sativa ssp. japonica HOM05D006364 ORTHO05D007968 5.9e-35 150.6 88 78.4
BcaC01g03770 Brassica carinata HOM05D006364 ORTHO05D007968 7.7e-35 150.2 92 78.3
Rhsim04G0245400 Rhododendron simsii HOM05D006364 ORTHO05D007968 7.7e-35 150.2 135 60.7
Zm00001eb418900 Zea mays HOM05D006364 ORTHO05D007968 7.7e-35 150.2 88 80.7
AUR62014465 Chenopodium quinoa HOM05D000862 ORTHO05D000943 1.0e-34 149.8 84 83.3
unitig_22.g5765 Utricularia gibba HOM05D006364 ORTHO05D007968 1.0e-34 149.8 92 79.3
BcaC01g03776 Brassica carinata HOM05D006364 ORTHO05D007968 1.3e-34 149.4 92 78.3
C03p48710 Brassica napus HOM05D006364 ORTHO05D007968 1.3e-34 149.4 92 78.3
C03p48760 Brassica napus HOM05D006364 ORTHO05D007968 1.3e-34 149.4 92 78.3
BolC3t17152H Brassica oleracea HOM05D006364 ORTHO05D007968 1.3e-34 149.4 92 78.3
Thhalv10021841m.g Eutrema salsugineum HOM05D006364 ORTHO05D007968 1.3e-34 149.4 92 78.3
BcaC09g48691 Brassica carinata HOM05D006364 ORTHO05D007968 1.7e-34 149.1 92 78.3
C01p46890 Brassica napus HOM05D006364 ORTHO05D007968 1.7e-34 149.1 92 78.3
BolC1t04661H Brassica oleracea HOM05D006364 ORTHO05D007968 1.7e-34 149.1 92 78.3
Potri.008G100400 Populus trichocarpa HOM05D006364 ORTHO05D007968 1.7e-34 149.1 86 80.2
Lalb_Chr20g0120331 Lupinus albus HOM05D006364 ORTHO05D007968 6.5e-34 147.1 87 79.3
CARHR092600 Cardamine hirsuta HOM05D006364 ORTHO05D007968 8.5e-34 146.7 89 77.5
TWI09G0430 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 1.1e-33 146.4 90 78.9
A01p37010 Brassica napus HOM05D006364 ORTHO05D007968 5.5e-33 144.1 92 76.1
BraA01t03762Z Brassica rapa HOM05D006364 ORTHO05D007968 5.5e-33 144.1 92 76.1
PSO210G6302 Papaver somniferum HOM05D006364 ORTHO05D007968 4.4e-30 134.4 88 72.7
PSO761G0417 Papaver somniferum HOM05D006364 ORTHO05D007968 4.4e-30 134.4 88 72.7
SHI21779 Sapria himalayana HOM05D006364 ORTHO05D007968 5.7e-30 134.0 82 76.8
AUR62036805 Chenopodium quinoa HOM05D000862 ORTHO05D000943 9.7e-30 133.3 120 59.2
ClCG05G006780 Citrullus lanatus HOM05D006364 ORTHO05D007968 1.7e-29 132.5 144 54.9
Zm00001eb137950 Zea mays HOM05D006364 ORTHO05D007968 2.8e-29 131.7 119 58.0
Manes.03G210000 Manihot esculenta HOM05D006364 ORTHO05D007968 7.0e-28 127.1 92 69.6
Sc07g0002970 Simmondsia chinensis HOM05D006364 ORTHO05D007968 1.2e-27 126.3 66 89.4
Ah.05g176740 Amaranthus hybridus HOM05D006364 ORTHO05D007968 1.0e-26 123.2 66 87.9
Lsat_1_v5_gn_6_117381 Lactuca sativa HOM05D006364 ORTHO05D007968 1.0e-26 123.2 73 79.5
Sed0013937 Sechium edule HOM05D006364 ORTHO05D007968 8.5e-26 120.2 66 84.8
Dinv29542 Davidia involucrata HOM05D006364 ORTHO05D007968 1.5e-25 119.4 66 83.3
MBI18_g09661_MAGBIO Magnolia biondii HOM05D006364 ORTHO05D007968 2.5e-25 118.6 118 58.5
SalBow4G1453 Salvia bowleyana HOM05D006364 ORTHO05D007968 1.6e-24 115.9 91 63.7
Zm00001eb224320 Zea mays HOM05D006364 ORTHO05D007968 4.0e-23 111.3 65 80.0
SGA_v2.0_scaffold449G51796 Striga asiatica HOM05D006364 ORTHO05D007968 5.4e-20 100.9 94 61.7
Zm00001eb193610 Zea mays HOM05D006364 ORTHO05D007968 9.1e-20 100.1 60 76.7
Hund17201 Selenicereus undatus HOM05D000862 ORTHO05D000943 2.0e-19 99.0 89 60.7
SalBow6G4934 Salvia bowleyana HOM05D006364 ORTHO05D007968 1.3e-18 96.3 94 53.2
EL10Ac3g06351 Beta vulgaris HOM05D006364 ORTHO05D007968 2.5e-17 92.0 57 70.2
SMO196G0146 Selaginella moellendorffii HOM05D006364 ORTHO05D007968 8.8e-15 83.6 71 52.1
vmacro07987 Vaccinium macrocarpon HOM05D006364 ORTHO05D007968 8.8e-15 83.6 107 46.7
Pp3c26_11720 Physcomitrium patens HOM05D006364 ORTHO05D007968 1.2e-14 83.2 83 44.6
AagrBONN_evm.TU.Sc2ySwM_368.2196 Anthoceros agrestis HOM05D006364 ORTHO05D007968 2.6e-14 82.0 83 48.2
Cfa015704 Carpinus fangiana HOM05D006364 ORTHO05D007968 1.3e-13 79.7 66 65.2
BraA01t03642Z Brassica rapa HOM05D006364 ORTHO05D007968 1.7e-13 79.3 72 59.7
A01p35610 Brassica napus HOM05D006364 ORTHO05D007968 2.4e-12 75.5 72 56.9
MD13G1146500 Malus domestica HOM05D006364 ORTHO05D007968 5.4e-12 74.3 56 67.9
Cre14.g626250 Chlamydomonas reinhardtii HOM05D006364 ORTHO05D007968 2.1e-08 62.4 67 44.8
MCO05G593 Micromonas commoda HOM05D006364 ORTHO05D007968 1.8e-07 59.3 71 42.3
SalBow3G2548 Salvia bowleyana HOM05D006364 ORTHO05D007968 3.0e-07 58.5 52 48.1
Ciclev10027020m.g Citrus clementina HOM05D006364 ORTHO05D007968 2.6e-06 55.5 136 34.6
Actinidia07522 Actinidia chinensis HOM05D006364 ORTHO05D007968 7.5e-06 53.9 43 60.5


User provided reference genes

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