Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1738.18 Capsicum annuum HOM05D000729 ORTHO05D001063 3.5e-36 154.5 79 100.0
CAN.G1298.16 Capsicum annuum HOM05D000729 ORTHO05D001063 1.1e-34 149.4 79 94.9
Gohir.A03G043250 Gossypium hirsutum HOM05D000729 ORTHO05D001063 1.5e-34 149.1 78 94.9
Hma1.2p1_0052F.1_g030753 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 1.5e-34 149.1 78 94.9
Hma1.2p1_1244F.1_g270060 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 1.5e-34 149.1 78 94.9
RcHm_v2.0_CPg0501741 Rosa chinensis HOM05D000729 ORTHO05D001063 1.5e-34 149.1 78 94.9
RcHm_v2.0_CPg0502671 Rosa chinensis HOM05D000729 ORTHO05D001063 1.5e-34 149.1 78 94.9
CSS0034759 Camellia sinensis var. sinensis HOM05D000729 ORTHO05D001063 3.3e-34 147.9 78 93.6
Potri.013G139112 Populus trichocarpa HOM05D000729 ORTHO05D001063 3.3e-34 147.9 78 93.6
C06p23140 Brassica napus HOM05D000729 ORTHO05D001063 4.3e-34 147.5 78 93.6
BolC2t10586H Brassica oleracea HOM05D000729 ORTHO05D001063 4.3e-34 147.5 78 93.6
BolSC29t60627H Brassica oleracea HOM05D000729 ORTHO05D001063 4.3e-34 147.5 78 93.6
BolSC35t60718H Brassica oleracea HOM05D000729 ORTHO05D001063 4.3e-34 147.5 78 93.6
BolSC37t60784H Brassica oleracea HOM05D000729 ORTHO05D001063 4.3e-34 147.5 78 93.6
BolSC49t61156H Brassica oleracea HOM05D000729 ORTHO05D001063 4.3e-34 147.5 78 93.6
BolSC49t61215H Brassica oleracea HOM05D000729 ORTHO05D001063 4.3e-34 147.5 78 93.6
BraSC103t45493Z Brassica rapa HOM05D000729 ORTHO05D001063 4.3e-34 147.5 78 93.6
BraSC138t45543Z Brassica rapa HOM05D000729 ORTHO05D001063 4.3e-34 147.5 78 93.6
BraSC58t46449Z Brassica rapa HOM05D000729 ORTHO05D001063 4.3e-34 147.5 78 93.6
Gohir.A09G045500 Gossypium hirsutum HOM05D000729 ORTHO05D001063 5.6e-34 147.1 78 93.6
RcHm_v2.0_Chr5g0051091 Rosa chinensis HOM05D000729 ORTHO05D001063 5.6e-34 147.1 78 92.3
HanXRQChr00c0214g0572641 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQChr00c0264g0572891 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQChr00c0434g0574661 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQChr00c0747g0577151 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQChr01g0020151 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQChr02g0059631 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQChr05g0152351 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQChr05g0152491 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQChr07g0194901 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQChr10g0284481 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQChr11g0321181 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQChr11g0327111 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQChr11g0333791 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQChr12g0369921 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQChr15g0489701 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQChr17g0569661 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQCPg0580271 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
HanXRQCPg0580451 Helianthus annuus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
PGR111G0104 Punica granatum HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
PGR111G0125 Punica granatum HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
Sed0008128 Sechium edule HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
Sed0019191 Sechium edule HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
Hund27858 Selenicereus undatus HOM05D000729 ORTHO05D001063 7.3e-34 146.7 78 93.6
C06p21330 Brassica napus HOM05D000729 ORTHO05D001063 9.5e-34 146.4 78 92.3
PSO357G0279 Papaver somniferum HOM05D000729 ORTHO05D001063 1.2e-33 146.0 78 92.3
PSO548G0058 Papaver somniferum HOM05D000729 ORTHO05D001063 1.2e-33 146.0 78 92.3
PSO548G0065 Papaver somniferum HOM05D000729 ORTHO05D001063 1.2e-33 146.0 78 92.3
Hund07988 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.6e-33 145.6 78 92.3
Hund08790 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.6e-33 145.6 78 92.3
Hund22780 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.6e-33 145.6 78 92.3
Hund27635 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.6e-33 145.6 78 92.3
Hund27885 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.6e-33 145.6 78 92.3
Hund27951 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.6e-33 145.6 78 92.3
Hund28172 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.6e-33 145.6 78 92.3
Hund28540 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.6e-33 145.6 78 92.3
Hund28970 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.6e-33 145.6 78 92.3
Hund29048 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.6e-33 145.6 78 92.3
Hund29105 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.6e-33 145.6 78 92.3
Hund29118 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.6e-33 145.6 78 92.3
Hund29149 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.6e-33 145.6 78 92.3
Hund29155 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.6e-33 145.6 78 92.3
CAN.G612.3 Capsicum annuum HOM05D000729 ORTHO05D001063 2.1e-33 145.2 78 92.3
Eucgr.I01854 Eucalyptus grandis HOM05D000729 ORTHO05D001063 2.1e-33 145.2 78 92.3
HanXRQChr13g0413721 Helianthus annuus HOM05D000729 ORTHO05D001063 2.1e-33 145.2 78 92.3
HanXRQChr13g0413871 Helianthus annuus HOM05D000729 ORTHO05D001063 2.1e-33 145.2 78 92.3
Nn029s41588 Nelumbo nucifera HOM05D000729 ORTHO05D001063 2.8e-33 144.8 78 92.3
Nn031s41603 Nelumbo nucifera HOM05D000729 ORTHO05D001063 2.8e-33 144.8 78 92.3
Nn206s45069 Nelumbo nucifera HOM05D000729 ORTHO05D001063 2.8e-33 144.8 78 92.3
Nn219s45284 Nelumbo nucifera HOM05D000729 ORTHO05D001063 2.8e-33 144.8 78 92.3
Nn233s45561 Nelumbo nucifera HOM05D000729 ORTHO05D001063 2.8e-33 144.8 78 92.3
Nn269s46005 Nelumbo nucifera HOM05D000729 ORTHO05D001063 2.8e-33 144.8 78 92.3
Migut.F01470 Erythranthe guttata HOM05D000729 ORTHO05D001063 3.6e-33 144.4 78 92.3
DCAR_032530 Daucus carota HOM05D000729 ORTHO05D001063 4.7e-33 144.1 78 92.3
DCAR_032546 Daucus carota HOM05D000729 ORTHO05D001063 4.7e-33 144.1 78 92.3
Thhalv10011731m.g Eutrema salsugineum HOM05D000729 ORTHO05D001063 6.2e-33 143.7 78 91.0
HanXRQChr09g0249681 Helianthus annuus HOM05D000729 ORTHO05D001063 6.2e-33 143.7 78 92.3
Gohir.A10G100333 Gossypium hirsutum HOM05D000729 ORTHO05D001063 8.1e-33 143.3 78 92.3
Solyc09g061460.3 Solanum lycopersicum HOM05D000729 ORTHO05D001063 1.8e-32 142.1 78 91.0
Hund03965 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.4e-32 141.7 78 89.7
CAN.G30.9 Capsicum annuum HOM05D000729 ORTHO05D001063 6.8e-32 140.2 78 89.7
HanXRQChr13g0413651 Helianthus annuus HOM05D000729 ORTHO05D001063 8.9e-32 139.8 77 90.9
Gohir.D01G134200 Gossypium hirsutum HOM05D000729 ORTHO05D001063 1.2e-31 139.4 78 89.7
CAN.G1185.9 Capsicum annuum HOM05D000729 ORTHO05D001063 3.4e-31 137.9 78 87.2
CAN.G398.11 Capsicum annuum HOM05D000729 ORTHO05D001063 4.4e-31 137.5 78 87.2
Gohir.D01G101826 Gossypium hirsutum HOM05D000729 ORTHO05D001063 2.9e-30 134.8 72 94.4
CAN.G1167.12 Capsicum annuum HOM05D000729 ORTHO05D001063 8.4e-30 133.3 78 88.5
Peaxi162Scf00014g00287 Petunia axillaris HOM05D000729 ORTHO05D001063 8.4e-30 133.3 73 91.8
Nitab4.5_0004920g0010 Nicotiana tabacum HOM05D000729 ORTHO05D001063 7.1e-29 130.2 73 90.4
Solyc11g021120.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 7.1e-29 130.2 77 87.0
LjContig00319g0001918 Lotus japonicus HOM05D000729 ORTHO05D001063 2.1e-28 128.6 74 86.5
Hund01554 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.1e-28 128.6 72 90.3
arahy.Tifrunner.gnm1.ann1.B0WG4N Arachis hypogaea HOM05D000729 ORTHO05D001063 3.0e-27 124.8 72 87.5
BolSC56t61238H Brassica oleracea HOM05D000729 ORTHO05D001063 8.7e-27 123.2 63 96.8
arahy.Tifrunner.gnm1.ann1.6Q4XIG Arachis hypogaea HOM05D000729 ORTHO05D001063 1.1e-26 122.9 72 86.1
arahy.Tifrunner.gnm1.ann1.E8A372 Arachis hypogaea HOM05D000729 ORTHO05D001063 2.5e-26 121.7 72 86.1
arahy.Tifrunner.gnm1.ann1.984MHU Arachis hypogaea HOM05D000729 ORTHO05D001063 3.3e-26 121.3 72 84.7
Medtr3g035660 Medicago truncatula HOM05D000729 ORTHO05D001063 5.6e-26 120.6 72 84.7
Gohir.A05G306433 Gossypium hirsutum HOM05D000729 ORTHO05D001063 7.3e-26 120.2 60 98.3
Gohir.A11G180330 Gossypium hirsutum HOM05D000729 ORTHO05D001063 7.3e-26 120.2 61 95.1
CiPaw.03G002000 Carya illinoinensis HOM05D000729 ORTHO05D001063 3.6e-25 117.9 67 91.0
Gohir.A05G307266 Gossypium hirsutum HOM05D000729 ORTHO05D001063 3.6e-25 117.9 60 96.7
arahy.Tifrunner.gnm1.ann1.NY619X Arachis hypogaea HOM05D000729 ORTHO05D001063 9.0e-24 113.2 73 83.6
Nitab4.5_0004929g0040 Nicotiana tabacum HOM05D000729 ORTHO05D001063 1.2e-23 112.8 72 81.9
Sed0012918 Sechium edule HOM05D000729 ORTHO05D001063 1.5e-23 112.5 78 79.5
Gohir.A04G039450 Gossypium hirsutum HOM05D000729 ORTHO05D001063 2.0e-23 112.1 60 95.0
Hma1.2p1_0052F.1_g030756 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 2.0e-23 112.1 60 95.0
Hma1.2p1_1244F.1_g270050 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 2.0e-23 112.1 60 95.0
Hund27921 Selenicereus undatus HOM05D000729 ORTHO05D001063 5.8e-23 110.5 61 91.8
HanXRQChr00c0780g0577311 Helianthus annuus HOM05D000729 ORTHO05D001063 9.9e-23 109.8 60 93.3
HanXRQChr10g0317951 Helianthus annuus HOM05D000729 ORTHO05D001063 9.9e-23 109.8 60 93.3
HanXRQChr16g0530791 Helianthus annuus HOM05D000729 ORTHO05D001063 9.9e-23 109.8 60 93.3
SalBow1G3941 Salvia bowleyana HOM05D000729 ORTHO05D001063 9.9e-23 109.8 60 93.3
SalBow1G4562 Salvia bowleyana HOM05D000729 ORTHO05D001063 9.9e-23 109.8 60 93.3
SalBow1G6647 Salvia bowleyana HOM05D000729 ORTHO05D001063 9.9e-23 109.8 60 93.3
SalBow6G4786 Salvia bowleyana HOM05D000729 ORTHO05D001063 9.9e-23 109.8 60 93.3
CsaV3_UNG208970 Cucumis sativus L. HOM05D000729 ORTHO05D001063 2.2e-22 108.6 54 98.1
HanXRQChr00c0379g0574301 Helianthus annuus HOM05D000729 ORTHO05D001063 2.2e-22 108.6 63 88.9
Lalb_Chr07g0191631 Lupinus albus HOM05D000729 ORTHO05D001063 2.9e-22 108.2 60 91.7
BraSC143t45669Z Brassica rapa HOM05D000729 ORTHO05D001063 4.9e-22 107.5 60 90.0
HanXRQChr02g0059781 Helianthus annuus HOM05D000729 ORTHO05D001063 4.9e-22 107.5 63 87.3
Nitab4.5_0000729g0070 Nicotiana tabacum HOM05D000729 ORTHO05D001063 1.4e-21 105.9 78 74.4
Phvul.003G089802 Phaseolus vulgaris HOM05D000729 ORTHO05D001063 2.4e-21 105.1 60 90.0
Phvul.009G090272 Phaseolus vulgaris HOM05D000729 ORTHO05D001063 2.4e-21 105.1 60 90.0
Gohir.D08G147600 Gossypium hirsutum HOM05D000729 ORTHO05D001063 3.2e-21 104.8 60 85.0
CSS0018773 Camellia sinensis var. sinensis HOM05D000729 ORTHO05D001063 5.4e-21 104.0 63 82.5
Gohir.D02G152152 Gossypium hirsutum HOM05D000729 ORTHO05D001063 5.4e-21 104.0 60 90.0
Nitab4.5_0006542g0040 Nicotiana tabacum HOM05D000729 ORTHO05D001063 5.4e-21 104.0 57 93.0
Gohir.A09G093100 Gossypium hirsutum HOM05D000729 ORTHO05D001063 1.6e-20 102.4 60 86.7
Nitab4.5_0000684g0120 Nicotiana tabacum HOM05D000729 ORTHO05D001063 1.6e-20 102.4 71 74.6
Gohir.D02G117466 Gossypium hirsutum HOM05D000729 ORTHO05D001063 3.5e-20 101.3 52 98.1
Peaxi162Scf00005g04915 Petunia axillaris HOM05D000729 ORTHO05D001063 3.5e-20 101.3 60 88.3
Lalb_Chr07g0191591 Lupinus albus HOM05D000729 ORTHO05D001063 4.6e-20 100.9 60 86.7
Nitab4.5_0012558g0020 Nicotiana tabacum HOM05D000729 ORTHO05D002596 6.0e-20 100.5 57 89.5
Hund23965 Selenicereus undatus HOM05D000729 ORTHO05D001063 6.0e-20 100.5 63 82.5
Potri.011G075051 Populus trichocarpa HOM05D000729 ORTHO05D001063 1.7e-19 99.0 78 67.9
Gohir.A06G098106 Gossypium hirsutum HOM05D000729 ORTHO05D001063 3.9e-19 97.8 60 85.0
Lalb_Chr25g0281801 Lupinus albus HOM05D000729 ORTHO05D001063 1.1e-18 96.3 59 83.1
arahy.Tifrunner.gnm1.ann1.M13VEQ Arachis hypogaea HOM05D000729 ORTHO05D001063 1.5e-18 95.9 51 92.2
EL10As15g24113 Beta vulgaris HOM05D000729 ORTHO05D001063 2.5e-18 95.1 54 90.7
Solyc06g009580.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 3.3e-18 94.7 49 93.9
Psat5g286120 Pisum sativum HOM05D000729 ORTHO05D001063 4.3e-18 94.4 60 80.0
MD01G1004600 Malus domestica HOM05D000729 ORTHO05D001063 6.2e-17 90.5 60 78.3
Nitab4.5_0003957g0020 Nicotiana tabacum HOM05D000729 ORTHO05D002596 1.4e-16 89.4 53 83.0
Solyc09g050070.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 9.0e-16 86.7 47 93.6
Sc20g0001970 Simmondsia chinensis HOM05D000680 ORTHO05D000738 1.2e-15 86.3 47 89.4
Nitab4.5_0007979g0050 Nicotiana tabacum HOM05D000729 ORTHO05D001063 3.4e-15 84.7 47 89.4
Os04g0309100 Oryza sativa ssp. japonica HOM05D000729 ORTHO05D001063 5.8e-15 84.0 55 83.6
Solyc02g011890.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 1.3e-14 82.8 55 74.5
Nitab4.5_0004533g0060 Nicotiana tabacum HOM05D000729 ORTHO05D001063 1.7e-14 82.4 59 72.9
Medtr4g103280 Medicago truncatula HOM05D000729 ORTHO05D002596 1.1e-13 79.7 44 90.9
EL10Ac5g11886 Beta vulgaris HOM05D000729 ORTHO05D001063 1.4e-13 79.3 49 83.7
MBI05_g23317_MAGBIO Magnolia biondii HOM05D000729 ORTHO05D001063 1.4e-13 79.3 49 83.7
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 4.2e-13 77.8 70 64.3
Lsat_1_v5_gn_8_77240 Lactuca sativa HOM05D000729 ORTHO05D001063 3.5e-12 74.7 44 84.1
Nitab4.5_0012234g0040 Nicotiana tabacum HOM05D000729 ORTHO05D001063 6.0e-12 73.9 49 77.6
HanXRQChr00c0264g0572831 Helianthus annuus HOM05D000729 ORTHO05D001063 3.9e-11 71.2 39 92.3
HanXRQChr00c0386g0574421 Helianthus annuus HOM05D000729 ORTHO05D001063 3.9e-11 71.2 39 92.3
HanXRQChr13g0416581 Helianthus annuus HOM05D000729 ORTHO05D001063 3.9e-11 71.2 39 92.3
Hund03962 Selenicereus undatus HOM05D000729 ORTHO05D002596 5.1e-11 70.9 45 82.2
HanXRQChr13g0413801 Helianthus annuus HOM05D000729 ORTHO05D001063 1.1e-10 69.7 39 89.7
HanXRQChr00c0634g0576581 Helianthus annuus HOM05D000729 ORTHO05D001063 4.3e-10 67.8 33 93.9
HanXRQChr13g0399651 Helianthus annuus HOM05D000729 ORTHO05D001063 7.4e-10 67.0 39 87.2
Potri.008G207100 Populus trichocarpa HOM05D000729 ORTHO05D001063 1.8e-08 62.4 72 52.8
Lsat_1_v5_gn_6_40860 Lactuca sativa HOM05D000729 ORTHO05D001063 2.4e-08 62.0 52 61.5
Cc00_g23030 Coffea canephora HOM05D000729 ORTHO05D001063 3.1e-08 61.6 39 79.5
RcHm_v2.0_Chr2g0118391 Rosa chinensis HOM05D000729 ORTHO05D001063 5.3e-08 60.8 32 90.6
Gohir.A08G078001 Gossypium hirsutum HOM05D000729 ORTHO05D001063 1.5e-07 59.3 32 87.5
HanXRQChr08g0227771 Helianthus annuus HOM05D000729 ORTHO05D001063 2.0e-07 58.9 32 87.5
BolSC45t60896H Brassica oleracea HOM05D000729 ORTHO05D001063 5.8e-07 57.4 32 84.4
Lalb_Chr25g0281891 Lupinus albus HOM05D000729 ORTHO05D001063 5.8e-07 57.4 42 71.4


User provided reference genes

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