Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G173.10 Capsicum annuum HOM05D001402 ORTHO05D001302 5.5e-66 254.2 133 100.0
PGSC0003DMG402008726 Solanum tuberosum HOM05D001402 ORTHO05D001302 7.7e-44 180.6 127 81.1
Sopen09g021000 Solanum pennellii HOM05D001402 ORTHO05D001302 1.5e-39 166.4 128 75.8
Peaxi162Scf00487g00313 Petunia axillaris HOM05D001402 ORTHO05D001302 2.6e-39 165.6 124 75.8
Solyc09g057580.4 Solanum lycopersicum HOM05D001402 ORTHO05D001302 3.7e-38 161.8 128 73.4
Nitab4.5_0005269g0010 Nicotiana tabacum HOM05D001402 ORTHO05D001302 2.0e-36 156.0 129 72.1
Nitab4.5_0000403g0130 Nicotiana tabacum HOM05D001402 ORTHO05D001302 7.2e-34 147.5 127 70.1
Nitab4.5_0002167g0030 Nicotiana tabacum HOM05D001402 ORTHO05D001302 1.4e-24 116.7 126 54.8
Peaxi162Scf00761g00018 Petunia axillaris HOM05D001402 ORTHO05D001302 1.7e-19 99.8 124 50.8
Actinidia09457 Actinidia chinensis HOM05D001402 ORTHO05D001302 2.5e-18 95.9 133 46.6
Dinv28836 Davidia involucrata HOM05D001402 ORTHO05D001302 9.5e-18 94.0 148 45.3
CSS0000378 Camellia sinensis var. sinensis HOM05D001402 ORTHO05D001302 4.0e-16 88.6 123 47.2
CSS0023465 Camellia sinensis var. sinensis HOM05D001402 ORTHO05D001302 4.0e-16 88.6 123 47.2
Actinidia23769 Actinidia chinensis HOM05D001402 ORTHO05D001302 8.9e-16 87.4 127 42.5
SalBow6G3499 Salvia bowleyana HOM05D001402 ORTHO05D001302 2.6e-15 85.9 86 58.1
Oeu033332.1 Olea europaea HOM05D001402 ORTHO05D001302 4.9e-14 81.6 123 44.7
Cc01_g16470 Coffea canephora HOM05D001402 ORTHO05D001302 5.4e-13 78.2 78 53.8
FAN15G1183 Fragaria x ananassa HOM05D001402 ORTHO05D001302 1.2e-12 77.0 106 44.3
FAN15G1519 Fragaria x ananassa HOM05D001402 ORTHO05D001302 1.2e-12 77.0 106 44.3
FAN15G2328 Fragaria x ananassa HOM05D001402 ORTHO05D001302 1.2e-12 77.0 106 44.3
Lj2A1121G81 Lonicera japonica HOM05D001402 ORTHO05D001302 2.0e-12 76.3 133 41.4
FvH4_2g18230 Fragaria vesca HOM05D001402 ORTHO05D001302 2.7e-12 75.9 106 43.4
FAN24G2984 Fragaria x ananassa HOM05D001402 ORTHO05D001302 2.7e-12 75.9 106 43.4
FAN27G3269 Fragaria x ananassa HOM05D001402 ORTHO05D001302 3.5e-12 75.5 77 49.4
MSTRG.17983 Avicennia marina HOM05D001402 ORTHO05D001302 4.5e-12 75.1 77 53.2
DCAR_004747 Daucus carota HOM05D001402 ORTHO05D001302 7.8e-12 74.3 123 46.3
Nn1g08170 Nelumbo nucifera HOM05D001402 ORTHO05D001302 7.8e-12 74.3 84 47.6
Duzib133G1202 Durio zibethinus HOM05D001402 ORTHO05D001302 1.0e-11 73.9 136 39.7
ClCG09G008680 Citrullus lanatus HOM05D001402 ORTHO05D001302 1.3e-11 73.6 126 38.9
Sed0017663 Sechium edule HOM05D001402 ORTHO05D001302 2.3e-11 72.8 115 41.7
Prupe.8G195000 Prunus persica HOM05D001402 ORTHO05D001302 3.9e-11 72.0 81 49.4
CiPaw.14G040400 Carya illinoinensis HOM05D001402 ORTHO05D001302 5.0e-11 71.6 124 41.1
Migut.D02487 Erythranthe guttata HOM05D001402 ORTHO05D001302 5.0e-11 71.6 123 40.7
CsaV3_7G026300 Cucumis sativus L. HOM05D001402 ORTHO05D001302 6.6e-11 71.2 117 40.2
Dinv30668 Davidia involucrata HOM05D001402 ORTHO05D001302 6.6e-11 71.2 136 44.1
Dinv34328 Davidia involucrata HOM05D001402 ORTHO05D001302 6.6e-11 71.2 136 44.1
Medtr8g012420 Medicago truncatula HOM05D001402 ORTHO05D001302 6.6e-11 71.2 81 50.6
Psat4g204600 Pisum sativum HOM05D001402 ORTHO05D001302 6.6e-11 71.2 105 42.9
RcHm_v2.0_Chr6g0283591 Rosa chinensis HOM05D001402 ORTHO05D001302 8.6e-11 70.9 77 46.8
Ciclev10031774m.g Citrus clementina HOM05D001402 ORTHO05D001302 1.1e-10 70.5 118 44.1
Gohir.D11G147000 Gossypium hirsutum HOM05D001402 ORTHO05D001302 1.1e-10 70.5 72 50.0
Gorai.007G157400 Gossypium raimondii HOM05D001402 ORTHO05D001302 1.1e-10 70.5 72 50.0
COL.COLO4_16119 Corchorus olitorius HOM05D001402 ORTHO05D001302 1.5e-10 70.1 72 50.0
Lsat_1_v5_gn_5_177800 Lactuca sativa HOM05D001402 ORTHO05D001302 1.5e-10 70.1 68 57.4
Manes.12G050300 Manihot esculenta HOM05D001402 ORTHO05D001302 1.5e-10 70.1 136 42.6
MD10G1156700 Malus domestica HOM05D001402 ORTHO05D001302 1.9e-10 69.7 107 41.1
Gohir.A11G140500 Gossypium hirsutum HOM05D001402 ORTHO05D001302 2.5e-10 69.3 72 48.6
vmacro14717 Vaccinium macrocarpon HOM05D001402 ORTHO05D001302 2.5e-10 69.3 116 40.5
SGA_v2.0_scaffold156G37279 Striga asiatica HOM05D001402 ORTHO05D001302 3.3e-10 68.9 69 53.6
Thecc.01G215800 Theobroma cacao HOM05D001402 ORTHO05D001302 3.3e-10 68.9 138 39.9
MD05G1166700 Malus domestica HOM05D001402 ORTHO05D001302 4.3e-10 68.6 76 48.7
Ca_23212_v3 Cicer arietinum L. HOM05D001402 ORTHO05D001302 5.6e-10 68.2 104 40.4
Glyma.16G088400 Glycine max HOM05D001402 ORTHO05D001302 5.6e-10 68.2 72 51.4
arahy.Tifrunner.gnm1.ann1.WPBC77 Arachis hypogaea HOM05D000015 ORTHO05D000984 7.3e-10 67.8 77 48.1
Eucgr.H00754 Eucalyptus grandis HOM05D001402 ORTHO05D001302 7.3e-10 67.8 70 52.9
Glyma.08G346900 Glycine max HOM05D001402 ORTHO05D001302 1.2e-09 67.0 72 50.0
arahy.Tifrunner.gnm1.ann1.ZHJA83 Arachis hypogaea HOM05D000015 ORTHO05D000984 2.1e-09 66.2 76 47.4
Phvul.010G023700 Phaseolus vulgaris HOM05D001402 ORTHO05D001302 2.1e-09 66.2 93 47.3
Rhsim01G0250500 Rhododendron simsii HOM05D001402 ORTHO05D001302 2.1e-09 66.2 127 36.2
Glyma.18G158300 Glycine max HOM05D001402 ORTHO05D001302 2.8e-09 65.9 72 48.6
VMungo0331G0917 Vigna mungo HOM05D001402 ORTHO05D001302 2.8e-09 65.9 72 50.0
Solyc06g007560.3 Solanum lycopersicum HOM05D001402 ORTHO05D001302 3.6e-09 65.5 133 39.1
Duzib138G1118 Durio zibethinus HOM05D001402 ORTHO05D001302 4.7e-09 65.1 72 47.2
Hma1.2p1_1234F.1_g269010 Hydrangea macrophylla HOM05D001402 ORTHO05D001302 4.7e-09 65.1 82 51.2
PGSC0003DMG400034507 Solanum tuberosum HOM05D001402 ORTHO05D001302 4.7e-09 65.1 63 50.8
TPR.G16681 Trifolium pratense HOM05D001402 ORTHO05D001302 4.7e-09 65.1 104 38.5
MBI07_g25973_MAGBIO Magnolia biondii HOM05D001402 ORTHO05D001302 1.0e-08 63.9 77 45.5
Lj1g0017192 Lotus japonicus HOM05D001402 ORTHO05D001302 1.8e-08 63.2 88 44.3
Haze_03343 Corylus avellana HOM05D001402 ORTHO05D001302 2.3e-08 62.8 83 44.6
HanXRQChr01g0016301 Helianthus annuus HOM05D001402 ORTHO05D001302 2.3e-08 62.8 90 44.4
VMungo1383G0312 Vigna mungo HOM05D001402 ORTHO05D001302 2.3e-08 62.8 104 36.5
Manes.13G051700 Manihot esculenta HOM05D001402 ORTHO05D001302 4.0e-08 62.0 77 45.5
CAN.G181.30 Capsicum annuum HOM05D001402 ORTHO05D001302 5.2e-08 61.6 126 40.5
CARHR081960 Cardamine hirsuta HOM05D001402 ORTHO05D001302 5.2e-08 61.6 83 49.4
TWI18G1005 Tripterygium wilfordii HOM05D001402 ORTHO05D001302 1.2e-07 60.5 116 38.8
Sabra02G0188500 Salix brachista HOM05D001402 ORTHO05D001302 1.5e-07 60.1 137 36.5
QL09p049505 Quercus lobata HOM05D001402 ORTHO05D001302 2.0e-07 59.7 115 40.0
THA.LOC104818981 Tarenaya hassleriana HOM05D001402 ORTHO05D001302 2.6e-07 59.3 73 47.9
Thhalv10020977m.g Eutrema salsugineum HOM05D001402 ORTHO05D001302 3.4e-07 58.9 73 47.9
Sp3g06260 Schrenkiella parvula HOM05D001402 ORTHO05D001302 4.4e-07 58.5 82 45.1
Phvul.008G142100 Phaseolus vulgaris HOM05D001402 ORTHO05D001302 7.5e-07 57.8 72 41.7
Potri.002G247700 Populus trichocarpa HOM05D001402 ORTHO05D001302 7.5e-07 57.8 101 40.6
AL3G18610 Arabidopsis lyrata HOM05D001402 ORTHO05D001302 9.8e-07 57.4 73 46.6
ECA248G0789 Erigeron canadensis HOM05D001402 ORTHO05D001302 9.8e-07 57.4 102 40.2
Hund18458 Selenicereus undatus HOM05D001402 ORTHO05D001302 1.7e-06 56.6 62 48.4
A05p40890 Brassica napus HOM05D001402 ORTHO05D001302 2.9e-06 55.8 82 45.1
BraA05t22818Z Brassica rapa HOM05D001402 ORTHO05D001302 2.9e-06 55.8 82 45.1
BolC5t34654H Brassica oleracea HOM05D001402 ORTHO05D001302 3.7e-06 55.5 82 45.1
Lj3g0006669 Lotus japonicus HOM05D001402 ORTHO05D001302 3.7e-06 55.5 59 50.8
C05p59990 Brassica napus HOM05D001402 ORTHO05D001302 4.9e-06 55.1 82 45.1
Carub.0003s0685 Capsella rubella HOM05D001402 ORTHO05D001302 4.9e-06 55.1 73 45.2
Aa31LG5G17880 Aethionema arabicum HOM05D001402 ORTHO05D001302 6.4e-06 54.7 73 45.2
Lalb_Chr19g0125931 Lupinus albus HOM05D001402 ORTHO05D001302 6.4e-06 54.7 71 42.3
Atru.chr6.1450 Acer truncatum HOM05D001402 ORTHO05D001302 8.3e-06 54.3 114 36.8
CDE07G0576 Ceratophyllum demersum HOM05D001402 ORTHO05D001302 8.3e-06 54.3 123 34.1
THA.LOC104822482 Tarenaya hassleriana HOM05D001402 ORTHO05D001302 8.3e-06 54.3 73 45.2


User provided reference genes

Program Settings