Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1725.2 Capsicum annuum HOM05D005203 ORTHO05D006383 3.8e-128 461.5 225 100.0
Sopen01g054300 Solanum pennellii HOM05D005203 ORTHO05D006383 1.4e-122 443.0 225 93.8
PGSC0003DMG402014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 1.6e-121 439.5 225 93.8
Solyc01g112240.4 Solanum lycopersicum HOM05D005203 ORTHO05D006383 1.2e-116 423.3 214 93.9
Nitab4.5_0000783g0090 Nicotiana tabacum HOM05D005203 ORTHO05D006383 1.3e-115 419.9 219 91.8
Peaxi162Scf00362g00132 Petunia axillaris HOM05D005203 ORTHO05D006383 9.1e-114 413.7 219 89.0
Lj5A171G136 Lonicera japonica HOM05D005203 ORTHO05D006383 1.3e-107 393.3 216 85.2
Migut.B00006 Erythranthe guttata HOM05D005203 ORTHO05D006383 6.3e-107 391.0 213 85.9
Dinv41871 Davidia involucrata HOM05D005203 ORTHO05D006383 3.8e-104 381.7 213 85.4
MSTRG.19946 Avicennia marina HOM05D005203 ORTHO05D006383 1.9e-103 379.4 213 83.1
HanXRQChr10g0298431 Helianthus annuus HOM05D005203 ORTHO05D006383 4.2e-103 378.3 223 79.8
ECA246G3822 Erigeron canadensis HOM05D005203 ORTHO05D006383 7.2e-103 377.5 213 82.6
Lj1g0021981 Lotus japonicus HOM05D005203 ORTHO05D006383 7.2e-103 377.5 213 82.6
HanXRQChr15g0476431 Helianthus annuus HOM05D005203 ORTHO05D006383 9.5e-103 377.1 223 78.5
SalBow1G5214 Salvia bowleyana HOM05D005203 ORTHO05D006383 1.2e-102 376.7 214 82.2
CSS0012413 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 4.7e-102 374.8 212 82.1
Cc09_g10810 Coffea canephora HOM05D005203 ORTHO05D006383 1.0e-101 373.6 207 87.0
Glyma.06G000300 Glycine max HOM05D005203 ORTHO05D006383 1.8e-101 372.9 213 81.7
Thecc.02G146000 Theobroma cacao HOM05D005203 ORTHO05D006383 2.3e-101 372.5 213 81.7
Glyma.04G000400 Glycine max HOM05D005203 ORTHO05D006383 5.2e-101 371.3 213 80.8
VMungo1309G0298 Vigna mungo HOM05D005203 ORTHO05D006383 1.5e-100 369.8 214 79.4
CANSAT25G3783 Cannabis sativa HOM05D005203 ORTHO05D006383 2.6e-100 369.0 212 81.1
Atru.chr5.3533 Acer truncatum HOM05D005203 ORTHO05D006383 4.4e-100 368.2 222 78.8
Medtr3g118520 Medicago truncatula HOM05D005203 ORTHO05D006383 4.4e-100 368.2 213 80.3
Lsat_1_v5_gn_4_71380 Lactuca sativa HOM05D005203 ORTHO05D006383 7.5e-100 367.5 218 78.4
Nn6g31681 Nelumbo nucifera HOM05D005203 ORTHO05D006383 7.5e-100 367.5 213 81.2
ECA234G1180 Erigeron canadensis HOM05D005203 ORTHO05D006383 1.7e-99 366.3 214 80.4
Potri.009G168000 Populus trichocarpa HOM05D005203 ORTHO05D006383 2.9e-99 365.5 213 80.3
MD05G1138700 Malus domestica HOM05D005203 ORTHO05D006383 3.7e-99 365.2 214 79.9
CiPaw.06G115500 Carya illinoinensis HOM05D005203 ORTHO05D006383 4.9e-99 364.8 213 79.8
Ca_15273_v3 Cicer arietinum L. HOM05D005203 ORTHO05D006383 4.9e-99 364.8 213 79.8
MD10G1141600 Malus domestica HOM05D005203 ORTHO05D006383 4.9e-99 364.8 215 79.5
Manes.11G110000 Manihot esculenta HOM05D005203 ORTHO05D006383 6.4e-99 364.4 213 80.3
Cfa005369 Carpinus fangiana HOM05D005203 ORTHO05D006383 8.3e-99 364.0 214 77.6
Prupe.8G179800 Prunus persica HOM05D005203 ORTHO05D006383 8.3e-99 364.0 213 80.3
Lsat_1_v5_gn_3_48560 Lactuca sativa HOM05D005203 ORTHO05D006383 1.1e-98 363.6 216 79.2
Dinv14173 Davidia involucrata HOM05D005203 ORTHO05D006383 1.4e-98 363.2 246 73.2
FAN27G1508 Fragaria x ananassa HOM05D005203 ORTHO05D006383 1.8e-98 362.8 211 81.0
Ciclev10028418m.g Citrus clementina HOM05D005203 ORTHO05D006383 3.2e-98 362.1 213 77.9
Potri.004G206900 Populus trichocarpa HOM05D005203 ORTHO05D006383 3.2e-98 362.1 213 78.9
TWI75G1664 Tripterygium wilfordii HOM05D005203 ORTHO05D006383 3.2e-98 362.1 213 78.9
Gohir.D12G014000 Gossypium hirsutum HOM05D005203 ORTHO05D006383 9.2e-98 360.5 213 77.5
Oeu006117.1 Olea europaea HOM05D005203 ORTHO05D006383 9.2e-98 360.5 195 85.6
QL11p056319 Quercus lobata HOM05D005203 ORTHO05D006383 9.2e-98 360.5 224 75.4
Sed0018804 Sechium edule HOM05D005203 ORTHO05D006383 9.2e-98 360.5 213 79.3
GSVIVG01002028001 Vitis vinifera HOM05D005203 ORTHO05D006383 9.2e-98 360.5 217 79.3
Sp7g37480 Schrenkiella parvula HOM05D005203 ORTHO05D006383 1.2e-97 360.1 212 80.7
MBI05_g33297_MAGBIO Magnolia biondii HOM05D005203 ORTHO05D006383 1.6e-97 359.8 215 79.5
Gohir.A12G013200 Gossypium hirsutum HOM05D005203 ORTHO05D006383 2.7e-97 359.0 213 77.0
RcHm_v2.0_Chr6g0280891 Rosa chinensis HOM05D005203 ORTHO05D006383 3.5e-97 358.6 211 79.6
TPR.G38553 Trifolium pratense HOM05D005203 ORTHO05D006383 3.5e-97 358.6 213 79.8
CARHR294030 Cardamine hirsuta HOM05D005203 ORTHO05D006383 1.3e-96 356.7 213 80.3
CsaV3_7G001910 Cucumis sativus L. HOM05D005203 ORTHO05D006383 1.3e-96 356.7 213 79.3
Phvul.009G115600 Phaseolus vulgaris HOM05D005203 ORTHO05D006383 1.3e-96 356.7 213 78.4
Gorai.008G014000 Gossypium raimondii HOM05D005203 ORTHO05D006383 2.3e-96 355.9 211 77.3
PSO210G4213 Papaver somniferum HOM05D005203 ORTHO05D006383 2.9e-96 355.5 212 79.2
FvH4_2g16770 Fragaria vesca HOM05D005203 ORTHO05D006383 5.0e-96 354.8 210 80.0
AT4G38240 Arabidopsis thaliana HOM05D005203 ORTHO05D006383 1.1e-95 353.6 212 79.7
FAN15G3115 Fragaria x ananassa HOM05D005203 ORTHO05D006383 1.1e-95 353.6 210 80.0
PSO170G2598 Papaver somniferum HOM05D005203 ORTHO05D006383 1.1e-95 353.6 212 78.3
THA.LOC104824732 Tarenaya hassleriana HOM05D005203 ORTHO05D006383 1.1e-95 353.6 212 79.2
BolC7t46794H Brassica oleracea HOM05D005203 ORTHO05D006383 1.5e-95 353.2 223 76.2
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 2.5e-95 352.4 214 77.6
Carub.0007s0018 Capsella rubella HOM05D005203 ORTHO05D006383 2.5e-95 352.4 212 79.7
MELO3C013249.2 Cucumis melo HOM05D005203 ORTHO05D006383 4.3e-95 351.7 213 77.9
BraA06t27778Z Brassica rapa HOM05D005203 ORTHO05D006383 5.6e-95 351.3 223 76.2
Actinidia20576 Actinidia chinensis HOM05D005203 ORTHO05D006383 7.3e-95 350.9 218 78.0
PGR042G0992 Punica granatum HOM05D005203 ORTHO05D006383 9.5e-95 350.5 213 77.0
BNapus_Darmor_BZH_scaffold_146p00070 Brassica napus HOM05D005203 ORTHO05D006383 1.2e-94 350.1 224 75.4
ClCG02G003410 Citrullus lanatus HOM05D005203 ORTHO05D006383 1.2e-94 350.1 227 74.4
CDE07G0143 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 2.1e-94 349.4 219 77.2
Psat5g000480 Pisum sativum HOM05D005203 ORTHO05D006383 3.6e-94 348.6 204 79.9
arahy.Tifrunner.gnm1.ann1.H6WGQ1 Arachis hypogaea HOM05D005203 ORTHO05D006383 1.4e-93 346.7 204 79.9
Sc18g0005820 Simmondsia chinensis HOM05D005203 ORTHO05D006383 2.3e-93 345.9 213 76.1
Aqoxy5G00999 Aquilegia oxysepala HOM05D005203 ORTHO05D006383 6.8e-93 344.4 213 77.5
AL7G10160 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 6.8e-93 344.4 212 78.3
Eucgr.H04989 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.2e-92 343.6 212 76.4
Os02g0832800 Oryza sativa ssp. japonica HOM05D005203 ORTHO05D006383 1.2e-92 343.6 212 76.9
FAN24G3349 Fragaria x ananassa HOM05D005203 ORTHO05D006383 5.8e-92 341.3 205 79.5
BcaNung01996 Brassica carinata HOM05D005203 ORTHO05D006383 3.7e-91 338.6 228 73.7
Zm00001eb421090 Zea mays HOM05D005203 ORTHO05D006383 8.3e-91 337.4 212 75.0
ATR0807G194 Amborella trichopoda HOM05D005203 ORTHO05D006383 7.0e-90 334.3 221 72.4
Thhalv10025208m.g Eutrema salsugineum HOM05D005203 ORTHO05D006383 7.0e-90 334.3 207 76.3
CSS0022527 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 9.2e-90 334.0 210 75.2
CSS0021914 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 1.6e-89 333.2 210 75.2
CiPaw.05G093000 Carya illinoinensis HOM05D005203 ORTHO05D006383 2.3e-88 329.3 192 79.7
Lalb_Chr08g0246871 Lupinus albus HOM05D005203 ORTHO05D006383 3.9e-88 328.6 204 75.0
Eucgr.L00584 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.1e-85 320.5 185 80.5
vmacro02339 Vaccinium macrocarpon HOM05D005203 ORTHO05D006383 3.7e-83 312.0 370 47.0
Haze_02001 Corylus avellana HOM05D005203 ORTHO05D006383 8.3e-83 310.8 187 78.1
SMO201G0157 Selaginella moellendorffii HOM05D005203 ORTHO05D006383 1.4e-82 310.1 213 70.0
Rhsim11G0198000 Rhododendron simsii HOM05D005203 ORTHO05D006383 8.6e-80 300.8 181 78.5
Cfa005368 Carpinus fangiana HOM05D005203 ORTHO05D006383 2.0e-76 289.7 184 75.5
arahy.Tifrunner.gnm1.ann1.Z16TJ0 Arachis hypogaea HOM05D005203 ORTHO05D006383 1.9e-74 283.1 204 68.6
Pp3c12_4490 Physcomitrium patens HOM05D005203 ORTHO05D006383 3.2e-74 282.3 214 62.1
SGA_v2.0_scaffold399G50809 Striga asiatica HOM05D005203 ORTHO05D006383 2.1e-73 279.6 271 56.1
Mapoly0041s0049 Marchantia polymorpha HOM05D005203 ORTHO05D006383 3.3e-71 272.3 181 70.7
DCAR_026076 Daucus carota HOM05D005203 ORTHO05D006383 6.2e-70 268.1 219 61.2
CSS0033501 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 1.1e-69 267.3 170 74.7
CSS0046634 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 1.1e-69 267.3 170 74.7
Sabra09G0130500 Salix brachista HOM05D005203 ORTHO05D006383 2.4e-69 266.2 222 61.7
Pp3c22_17330 Physcomitrium patens HOM05D005203 ORTHO05D006383 8.9e-69 264.2 215 60.9
CSS0007702 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 5.8e-68 261.5 161 75.8
HPP92_022155 Vanilla planifolia HOM05D005203 ORTHO05D006383 9.9e-68 260.8 164 75.6
Eucgr.L00583 Eucalyptus grandis HOM05D005203 ORTHO05D006383 2.2e-67 259.6 152 79.6
Hund06364 Selenicereus undatus HOM05D005203 ORTHO05D006383 1.1e-66 257.3 216 60.6
AagrBONN_evm.TU.Sc2ySwM_362.2915 Anthoceros agrestis HOM05D005203 ORTHO05D006383 5.4e-66 255.0 201 64.2
Cpa.g.c28580 Carica papaya HOM05D005203 ORTHO05D006383 2.1e-65 253.1 171 73.1
TAR376G0977 Trochodendron aralioides HOM05D005203 ORTHO05D006383 3.5e-65 252.3 161 74.5
COL.COLO4_19776 Corchorus olitorius HOM05D005203 ORTHO05D006383 8.7e-64 247.7 189 65.6
Sabra04G0139200 Salix brachista HOM05D005203 ORTHO05D006383 8.7e-64 247.7 186 66.1
Aa31LG1G14200 Aethionema arabicum HOM05D005203 ORTHO05D006383 4.3e-63 245.4 163 74.2
CBR_g40811 Chara braunii HOM05D005203 ORTHO05D006383 1.1e-58 230.7 184 58.7
HPP92_004948 Vanilla planifolia HOM05D005203 ORTHO05D006383 2.1e-57 226.5 161 67.1
AUR62013174 Chenopodium quinoa HOM05D005203 ORTHO05D006383 5.6e-55 218.4 184 62.5
MCO10G329 Micromonas commoda HOM05D005203 ORTHO05D006383 4.6e-49 198.7 187 52.9
EL10Ac9g21529 Beta vulgaris HOM05D005203 ORTHO05D006383 1.3e-43 180.6 177 54.2
AUR62010173 Chenopodium quinoa HOM05D005203 ORTHO05D006383 1.9e-42 176.8 110 73.6
GSVIVG01002907001 Vitis vinifera HOM05D005203 ORTHO05D006383 6.7e-40 168.3 95 84.2
TAR628G1330 Trochodendron aralioides HOM05D005203 ORTHO05D006383 2.2e-35 153.3 98 74.5
AL7G13060 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 3.8e-35 152.5 112 68.8
CANSAT78G0806 Cannabis sativa HOM05D005203 ORTHO05D006383 9.7e-31 137.9 91 72.5
MCO01G683 Micromonas commoda HOM05D005203 ORTHO05D006383 1.6e-30 137.1 186 39.8
SEGI_16108 Sequoiadendron giganteum HOM05D005203 ORTHO05D006383 7.9e-17 91.7 77 59.7
AL6G14740 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 8.8e-16 88.2 45 88.9
CAN.G533.11 Capsicum annuum HOM05D005203 ORTHO05D006383 8.8e-16 88.2 61 67.2
Ah.01g009970 Amaranthus hybridus HOM05D005203 ORTHO05D006383 1.1e-10 71.2 32 90.6


User provided reference genes

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