Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1720.6 Capsicum annuum HOM05D001123 ORTHO05D000966 1.7e-38 162.2 81 100.0
CAN.G2187.1 Capsicum annuum HOM05D001123 ORTHO05D000966 9.2e-32 139.8 106 72.6
CAN.G5283.1 Capsicum annuum HOM05D001123 ORTHO05D000966 1.0e-27 126.3 106 66.0
CAN.G836.29 Capsicum annuum HOM05D001123 ORTHO05D000966 7.0e-24 113.6 91 68.1
PGSC0003DMG400010030 Solanum tuberosum HOM05D001123 ORTHO05D000966 9.2e-24 113.2 92 67.4
Sopen02g034880 Solanum pennellii HOM05D001123 ORTHO05D000966 2.7e-23 111.7 92 66.3
Solyc02g090190.1 Solanum lycopersicum HOM05D001123 ORTHO05D000966 7.8e-23 110.2 92 65.2
Nitab4.5_0000108g0250 Nicotiana tabacum HOM05D001123 ORTHO05D000966 6.6e-22 107.1 91 64.8
Nitab4.5_0001014g0100 Nicotiana tabacum HOM05D001123 ORTHO05D000966 1.9e-21 105.5 91 63.7
Peaxi162Scf00535g00076 Petunia axillaris HOM05D001123 ORTHO05D000966 8.0e-20 100.1 89 61.8
CAN.G21.15 Capsicum annuum HOM05D001123 ORTHO05D000966 1.9e-16 89.0 78 60.3
Oeu032932.1 Olea europaea HOM05D001123 ORTHO05D000966 4.3e-13 77.8 94 46.8
Glyma.02G062200 Glycine max HOM05D001123 ORTHO05D000966 1.2e-12 76.3 97 46.4
Glyma.02G062500 Glycine max HOM05D001123 ORTHO05D000966 1.2e-12 76.3 97 46.4
Glyma.16G144500 Glycine max HOM05D001123 ORTHO05D000966 2.8e-12 75.1 97 46.4
Glyma.16G144800 Glycine max HOM05D001123 ORTHO05D000966 2.8e-12 75.1 97 46.4
MSTRG.3406 Avicennia marina HOM05D001123 ORTHO05D000966 3.6e-12 74.7 102 46.1
VMungo0871G0001 Vigna mungo HOM05D001123 ORTHO05D000966 3.6e-12 74.7 98 43.9
MELO3C007525.2 Cucumis melo HOM05D001123 ORTHO05D000966 4.7e-12 74.3 78 55.1
Phvul.003G248700 Phaseolus vulgaris HOM05D001123 ORTHO05D000966 4.7e-12 74.3 98 43.9
Phvul.003G249000 Phaseolus vulgaris HOM05D001123 ORTHO05D000966 6.2e-12 73.9 98 43.9
Lj4g0012437 Lotus japonicus HOM05D001123 ORTHO05D000966 1.1e-11 73.2 104 43.3
Dinv39909 Davidia involucrata HOM05D001123 ORTHO05D000966 1.4e-11 72.8 106 42.5
Lalb_Chr09g0322891 Lupinus albus HOM05D001123 ORTHO05D000966 1.4e-11 72.8 105 43.8
Psat4g089720 Pisum sativum HOM05D001123 ORTHO05D000966 1.4e-11 72.8 104 44.2
SalBow1G5865 Salvia bowleyana HOM05D001123 ORTHO05D000966 1.4e-11 72.8 93 51.6
SalBow1G8715 Salvia bowleyana HOM05D001123 ORTHO05D000966 1.4e-11 72.8 93 51.6
TPR.G11251 Trifolium pratense HOM05D001123 ORTHO05D000966 1.8e-11 72.4 104 42.3
Oeu003946.1 Olea europaea HOM05D001123 ORTHO05D000966 2.3e-11 72.0 103 43.7
Oeu039053.1 Olea europaea HOM05D001123 ORTHO05D000966 2.3e-11 72.0 102 44.1
Atru.chr3.452 Acer truncatum HOM05D001123 ORTHO05D000966 4.0e-11 71.2 109 42.2
Oeu003953.1 Olea europaea HOM05D001123 ORTHO05D000966 5.2e-11 70.9 102 46.1
Lj4g0020631 Lotus japonicus HOM05D001123 ORTHO05D000966 6.8e-11 70.5 47 70.2
Peaxi162Scf02201g00002 Petunia axillaris HOM05D001123 ORTHO05D000966 1.2e-10 69.7 97 43.3
Rhsim10G0125300 Rhododendron simsii HOM05D001123 ORTHO05D000966 1.5e-10 69.3 81 54.3
Hma1.2p1_0546F.1_g176140 Hydrangea macrophylla HOM05D001123 ORTHO05D000966 2.0e-10 68.9 99 44.4
QL06p043882 Quercus lobata HOM05D001123 ORTHO05D000966 3.4e-10 68.2 109 40.4
Medtr8g079020 Medicago truncatula HOM05D001123 ORTHO05D000966 5.8e-10 67.4 47 70.2
CsaV3_6G042860 Cucumis sativus L. HOM05D001123 ORTHO05D000966 7.5e-10 67.0 46 73.9
Actinidia12080 Actinidia chinensis HOM05D001123 ORTHO05D000966 1.3e-09 66.2 95 41.1
ClCG01G016550 Citrullus lanatus HOM05D001123 ORTHO05D000966 2.2e-09 65.5 46 71.7
FAN23G1160 Fragaria x ananassa HOM05D001123 ORTHO05D000966 2.2e-09 65.5 107 40.2
FAN26G2494 Fragaria x ananassa HOM05D001123 ORTHO05D000966 2.2e-09 65.5 107 40.2
arahy.Tifrunner.gnm1.ann1.Y5U0FM Arachis hypogaea HOM05D001123 ORTHO05D000966 2.9e-09 65.1 97 42.3
Ca_22218_v3 Cicer arietinum L. HOM05D001123 ORTHO05D000966 2.9e-09 65.1 104 40.4
Lalb_Chr05g0213111 Lupinus albus HOM05D001123 ORTHO05D000966 2.9e-09 65.1 105 40.0
arahy.Tifrunner.gnm1.ann1.9HQ4ZM Arachis hypogaea HOM05D001123 ORTHO05D000966 4.9e-09 64.3 97 41.2
SalBow1G2401 Salvia bowleyana HOM05D001123 ORTHO05D000966 4.9e-09 64.3 88 47.7
FvH4_1g14760 Fragaria vesca HOM05D001123 ORTHO05D000966 6.4e-09 63.9 107 39.3
FAN19G0422 Fragaria x ananassa HOM05D001123 ORTHO05D000966 6.4e-09 63.9 107 39.3
FAN28G2464 Fragaria x ananassa HOM05D001123 ORTHO05D000966 6.4e-09 63.9 107 39.3
Prupe.1G388400 Prunus persica HOM05D001123 ORTHO05D000966 6.4e-09 63.9 95 43.2
Sed0018940 Sechium edule HOM05D001123 ORTHO05D000966 6.4e-09 63.9 43 72.1
TAR381G1074 Trochodendron aralioides HOM05D001123 ORTHO05D000966 6.4e-09 63.9 110 39.1
CSS0030273 Camellia sinensis var. sinensis HOM05D001123 ORTHO05D000966 8.3e-09 63.5 89 44.9
Dinv26756 Davidia involucrata HOM05D001123 ORTHO05D000966 1.1e-08 63.2 101 40.6
SalBow1G7475 Salvia bowleyana HOM05D001123 ORTHO05D000966 1.1e-08 63.2 88 47.7
TAR625G0798 Trochodendron aralioides HOM05D001123 ORTHO05D000966 1.1e-08 63.2 82 47.6
HanXRQChr09g0264431 Helianthus annuus HOM05D001123 ORTHO05D000966 1.4e-08 62.8 76 50.0
Potri.007G036100 Populus trichocarpa HOM05D001123 ORTHO05D000966 1.4e-08 62.8 101 38.6
Sabra07G0031500 Salix brachista HOM05D001123 ORTHO05D000966 1.9e-08 62.4 101 42.6
MSTRG.23797 Avicennia marina HOM05D001123 ORTHO05D000966 2.4e-08 62.0 101 41.6
Ca_22216_v3 Cicer arietinum L. HOM05D001123 ORTHO05D000966 2.4e-08 62.0 104 40.4
ECA232G2671 Erigeron canadensis HOM05D001123 ORTHO05D000966 2.4e-08 62.0 75 48.0
MD02G1160800 Malus domestica HOM05D001123 ORTHO05D000966 2.4e-08 62.0 43 72.1
RcHm_v2.0_Chr2g0103701 Rosa chinensis HOM05D001123 ORTHO05D000966 2.4e-08 62.0 107 39.3
Sed0000471 Sechium edule HOM05D001123 ORTHO05D000966 2.4e-08 62.0 55 60.0
Cc07_g05510 Coffea canephora HOM05D001123 ORTHO05D000966 3.2e-08 61.6 47 66.0
Duzib187G1163 Durio zibethinus HOM05D001123 ORTHO05D000966 3.2e-08 61.6 108 39.8
Potri.005G131300 Populus trichocarpa HOM05D001123 ORTHO05D000966 3.2e-08 61.6 103 40.8
MELO3C020927.2 Cucumis melo HOM05D001123 ORTHO05D000966 4.1e-08 61.2 42 71.4
MSTRG.15408 Avicennia marina HOM05D001123 ORTHO05D000966 5.4e-08 60.8 102 40.2
Medtr8g079040 Medicago truncatula HOM05D001123 ORTHO05D000966 5.4e-08 60.8 104 40.4
CANSAT01G0896 Cannabis sativa HOM05D001123 ORTHO05D000966 7.1e-08 60.5 109 38.5
Ciclev10024810m.g Citrus clementina HOM05D001123 ORTHO05D000966 7.1e-08 60.5 109 40.4
Psat4g089640 Pisum sativum HOM05D001123 ORTHO05D000966 7.1e-08 60.5 104 39.4
CsaV3_2G017240 Cucumis sativus L. HOM05D001123 ORTHO05D000966 9.2e-08 60.1 42 69.0
Gohir.A02G160600 Gossypium hirsutum HOM05D001123 ORTHO05D000966 1.2e-07 59.7 101 43.6
Gohir.D03G019800 Gossypium hirsutum HOM05D001123 ORTHO05D000966 1.2e-07 59.7 101 43.6
Gorai.003G020900 Gossypium raimondii HOM05D001123 ORTHO05D000966 1.2e-07 59.7 101 43.6
Prupe.7G142900 Prunus persica HOM05D001123 ORTHO05D000966 1.2e-07 59.7 72 47.2
Nn5g29396 Nelumbo nucifera HOM05D001123 ORTHO05D000966 1.6e-07 59.3 71 47.9
MBI16_g19887_MAGBIO Magnolia biondii HOM05D001123 ORTHO05D000966 2.1e-07 58.9 110 40.0
RhsimUnG0104800 Rhododendron simsii HOM05D001123 ORTHO05D000966 2.1e-07 58.9 93 39.8
HanXRQChr15g0489681 Helianthus annuus HOM05D001123 ORTHO05D000966 2.7e-07 58.5 76 46.1
Prupe.7G142800 Prunus persica HOM05D001123 ORTHO05D000966 2.7e-07 58.5 70 47.1
CiPaw.01G026900 Carya illinoinensis HOM05D001123 ORTHO05D000966 3.5e-07 58.2 108 36.1
MSTRG.2915 Avicennia marina HOM05D001123 ORTHO05D000966 4.6e-07 57.8 64 56.2
COL.COLO4_11320 Corchorus olitorius HOM05D001123 ORTHO05D000966 4.6e-07 57.8 99 42.4
Sabra05G0106700 Salix brachista HOM05D001123 ORTHO05D000966 4.6e-07 57.8 102 39.2
Thecc.01G047600 Theobroma cacao HOM05D001123 ORTHO05D000966 4.6e-07 57.8 108 38.0
Manes.13G130600 Manihot esculenta HOM05D001123 ORTHO05D000966 6.0e-07 57.4 109 36.7
QL06p043869 Quercus lobata HOM05D001123 ORTHO05D000966 6.0e-07 57.4 42 69.0
Cpa.g.sc15.93 Carica papaya HOM05D001123 ORTHO05D000966 7.8e-07 57.0 43 69.8
CiPaw.02G012500 Carya illinoinensis HOM05D001123 ORTHO05D000966 7.8e-07 57.0 70 48.6
Haze_15181 Corylus avellana HOM05D001123 ORTHO05D000966 7.8e-07 57.0 109 35.8
MD15G1274900 Malus domestica HOM05D001123 ORTHO05D000966 7.8e-07 57.0 75 45.3
DCAR_010937 Daucus carota HOM05D001123 ORTHO05D000966 1.3e-06 56.2 67 49.3
PSO801G0208 Papaver somniferum HOM05D001123 ORTHO05D000966 1.3e-06 56.2 97 41.2
PGR031G3222 Punica granatum HOM05D001123 ORTHO05D000966 1.7e-06 55.8 99 39.4
THA.LOC104807577 Tarenaya hassleriana HOM05D001123 ORTHO05D000966 1.7e-06 55.8 66 53.0
TWI73G0026 Tripterygium wilfordii HOM05D001123 ORTHO05D000966 1.7e-06 55.8 79 46.8
Cfa004220 Carpinus fangiana HOM05D001123 ORTHO05D000966 2.3e-06 55.5 109 35.8
MD02G1160700 Malus domestica HOM05D001123 ORTHO05D000966 2.3e-06 55.5 72 45.8
SGA_v2.0_scaffold15G07226 Striga asiatica HOM05D001123 ORTHO05D000966 2.3e-06 55.5 68 52.9
SGA_v2.0_scaffold204G41616 Striga asiatica HOM05D001123 ORTHO05D000966 2.3e-06 55.5 81 49.4
Gohir.D11G195400 Gossypium hirsutum HOM05D001123 ORTHO05D000966 3.0e-06 55.1 108 38.0
Gorai.007G209300 Gossypium raimondii HOM05D001123 ORTHO05D000966 3.0e-06 55.1 108 38.0
CSS0028279 Camellia sinensis var. sinensis HOM05D001123 ORTHO05D000966 3.9e-06 54.7 71 46.5
ClCG02G013130 Citrullus lanatus HOM05D001123 ORTHO05D000966 3.9e-06 54.7 50 62.0
Gohir.A11G188900 Gossypium hirsutum HOM05D001123 ORTHO05D000966 5.1e-06 54.3 108 38.9
TWI09G1248 Tripterygium wilfordii HOM05D001123 ORTHO05D000966 5.1e-06 54.3 84 42.9
Migut.H00489 Erythranthe guttata HOM05D001123 ORTHO05D000966 6.6e-06 53.9 72 52.8
Eucgr.F00042 Eucalyptus grandis HOM05D001123 ORTHO05D000966 6.6e-06 53.9 106 36.8
MBI16_g31476_MAGBIO Magnolia biondii HOM05D001123 ORTHO05D000966 6.6e-06 53.9 67 50.7
PSO339G5770 Papaver somniferum HOM05D001123 ORTHO05D000966 6.6e-06 53.9 96 40.6
Cc10_g03690 Coffea canephora HOM05D001123 ORTHO05D000966 8.6e-06 53.5 37 70.3


User provided reference genes

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