Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1705.4 Capsicum annuum HOM05D000106 ORTHO05D009366 2.8e-94 348.6 172 100.0
CAN.G1061.29 Capsicum annuum HOM05D000106 ORTHO05D009366 5.6e-79 297.7 170 88.2
PGSC0003DMG400030658 Solanum tuberosum HOM05D000106 ORTHO05D009366 3.7e-75 285.0 170 81.2
Solyc02g091590.4 Solanum lycopersicum HOM05D000106 ORTHO05D009366 1.4e-74 283.1 170 81.2
Sopen02g036210 Solanum pennellii HOM05D000106 ORTHO05D009366 2.7e-73 278.9 170 79.4
Nitab4.5_0007512g0050 Nicotiana tabacum HOM05D000106 ORTHO05D009366 2.2e-67 259.2 170 74.7
Nitab4.5_0000291g0090 Nicotiana tabacum HOM05D000106 ORTHO05D009366 2.9e-67 258.8 170 74.7
Peaxi162Scf00703g00117 Petunia axillaris HOM05D000106 ORTHO05D009366 8.4e-67 257.3 170 77.1
DCAR_025861 Daucus carota HOM05D000106 ORTHO05D009366 2.7e-41 172.6 165 53.9
Migut.H00291 Erythranthe guttata HOM05D000106 ORTHO05D009366 5.3e-37 158.3 171 50.3
Actinidia11922 Actinidia chinensis HOM05D000106 ORTHO05D009366 1.0e-35 154.1 165 51.5
DCAR_010758 Daucus carota HOM05D000106 ORTHO05D009366 4.9e-35 151.8 159 50.9
Lj4C175G7 Lonicera japonica HOM05D000106 ORTHO05D009366 4.9e-35 151.8 163 52.1
SalBow3G0414 Salvia bowleyana HOM05D000106 ORTHO05D009366 4.2e-34 148.7 167 50.9
SalBow3G3457 Salvia bowleyana HOM05D000106 ORTHO05D009366 4.2e-34 148.7 167 50.9
GSVIVG01003848001 Vitis vinifera HOM05D000106 ORTHO05D009366 4.6e-33 145.2 167 48.5
CSS0035806 Camellia sinensis var. sinensis HOM05D000106 ORTHO05D009366 6.0e-33 144.8 162 50.0
Hma1.2p1_0080F.1_g042090 Hydrangea macrophylla HOM05D000106 ORTHO05D009366 2.3e-32 142.9 167 47.9
Atru.chr3.1172 Acer truncatum HOM05D000106 ORTHO05D009366 8.7e-32 141.0 168 50.0
Atru.chr3.1156 Acer truncatum HOM05D000106 ORTHO05D009366 1.1e-31 140.6 168 51.2
Cc07_g07900 Coffea canephora HOM05D000106 ORTHO05D009366 1.5e-31 140.2 165 44.8
Ciclev10024877m.g Citrus clementina HOM05D000106 ORTHO05D009366 1.3e-30 137.1 169 47.9
vmacro05521 Vaccinium macrocarpon HOM05D000106 ORTHO05D009366 1.6e-30 136.7 162 50.0
Gohir.D12G080401 Gossypium hirsutum HOM05D000106 ORTHO05D009366 4.8e-30 135.2 158 49.4
ECA232G0426 Erigeron canadensis HOM05D000106 ORTHO05D009366 6.3e-30 134.8 167 44.9
Gorai.008G088500 Gossypium raimondii HOM05D000106 ORTHO05D009366 6.3e-30 134.8 158 49.4
HanXRQChr09g0262871 Helianthus annuus HOM05D000106 ORTHO05D009366 6.3e-30 134.8 167 45.5
Gohir.A12G082300 Gossypium hirsutum HOM05D000106 ORTHO05D009366 1.8e-29 133.3 158 48.7
Potri.007G004700 Populus trichocarpa HOM05D000106 ORTHO05D009366 1.8e-29 133.3 161 47.8
Duzib147G0554 Durio zibethinus HOM05D000106 ORTHO05D009366 3.1e-29 132.5 163 49.1
Sabra07G0003400 Salix brachista HOM05D000106 ORTHO05D009366 3.1e-29 132.5 162 46.3
TWI53G2145 Tripterygium wilfordii HOM05D000106 ORTHO05D009366 5.3e-29 131.7 166 46.4
Manes.12G121400 Manihot esculenta HOM05D000106 ORTHO05D009366 1.5e-28 130.2 167 43.7
TWI74G0043 Tripterygium wilfordii HOM05D000106 ORTHO05D009366 2.0e-28 129.8 166 46.4
COL.COLO4_11682 Corchorus olitorius HOM05D000106 ORTHO05D009366 2.6e-28 129.4 155 50.3
Lalb_Chr09g0325781 Lupinus albus HOM05D000106 ORTHO05D009366 4.5e-28 128.6 171 44.4
CSS0008039 Camellia sinensis var. sinensis HOM05D000106 ORTHO05D009366 1.0e-27 127.5 124 53.2
CSS0039079 Camellia sinensis var. sinensis HOM05D000106 ORTHO05D009366 1.0e-27 127.5 124 53.2
Medtr5g030920 Medicago truncatula HOM05D000106 ORTHO05D009366 1.3e-27 127.1 166 42.2
ClCG06G001560 Citrullus lanatus HOM05D000106 ORTHO05D009366 2.9e-27 125.9 169 43.2
Lsat_1_v5_gn_4_156320 Lactuca sativa HOM05D000106 ORTHO05D009366 3.8e-27 125.6 160 43.8
Lj2g0015080 Lotus japonicus HOM05D000106 ORTHO05D009366 6.5e-27 124.8 158 45.6
TAR381G1628 Trochodendron aralioides HOM05D000106 ORTHO05D009366 6.5e-27 124.8 171 45.0
Thecc.01G084200 Theobroma cacao HOM05D000106 ORTHO05D009366 3.2e-26 122.5 159 47.2
Glyma.09G202300 Glycine max HOM05D000106 ORTHO05D009366 5.5e-26 121.7 168 41.7
Psat2g134120 Pisum sativum HOM05D000106 ORTHO05D009366 5.5e-26 121.7 163 44.2
CsaV3_6G007530 Cucumis sativus L. HOM05D000106 ORTHO05D009366 7.2e-26 121.3 171 42.1
TPR.G37114 Trifolium pratense HOM05D000106 ORTHO05D009366 7.2e-26 121.3 165 41.2
Cpa.g.sc129.17 Carica papaya HOM05D000106 ORTHO05D009366 9.3e-26 120.9 151 47.0
MELO3C022378.2 Cucumis melo HOM05D000106 ORTHO05D009366 9.3e-26 120.9 153 46.4
HanXRQChr11g0324421 Helianthus annuus HOM05D000106 ORTHO05D009366 2.7e-25 119.4 167 41.3
arahy.Tifrunner.gnm1.ann1.5KC586 Arachis hypogaea HOM05D000106 ORTHO05D009366 4.6e-25 118.6 159 44.0
arahy.Tifrunner.gnm1.ann1.5W9Q31 Arachis hypogaea HOM05D000106 ORTHO05D009366 4.6e-25 118.6 165 44.2
arahy.Tifrunner.gnm1.ann1.SZ7D6R Arachis hypogaea HOM05D000106 ORTHO05D009366 4.6e-25 118.6 159 44.0
arahy.Tifrunner.gnm1.ann1.TBZT1P Arachis hypogaea HOM05D000106 ORTHO05D009366 4.6e-25 118.6 165 44.2
Prupe.6G209400 Prunus persica HOM05D000106 ORTHO05D009366 1.0e-24 117.5 168 39.9
CiPaw.07G042800 Carya illinoinensis HOM05D000106 ORTHO05D009366 1.3e-24 117.1 146 47.9
Ca_13467_v3 Cicer arietinum L. HOM05D000106 ORTHO05D009366 1.8e-24 116.7 158 41.8
Glyma.01G020100 Glycine max HOM05D000106 ORTHO05D009366 5.1e-24 115.2 160 41.2
MBI16_g36495_MAGBIO Magnolia biondii HOM05D000106 ORTHO05D009366 8.7e-24 114.4 175 41.7
VMungo1215G1471 Vigna mungo HOM05D000106 ORTHO05D009366 8.7e-24 114.4 168 41.7
FAN26G2599 Fragaria x ananassa HOM05D000106 ORTHO05D009366 1.1e-23 114.0 166 39.2
Cfa006832 Carpinus fangiana HOM05D000106 ORTHO05D009366 2.5e-23 112.8 152 47.4
MD01G1044500 Malus domestica HOM05D000106 ORTHO05D009366 4.3e-23 112.1 170 41.2
PSO761G0473 Papaver somniferum HOM05D000106 ORTHO05D009366 4.3e-23 112.1 168 41.1
Phvul.002G143400 Phaseolus vulgaris HOM05D000106 ORTHO05D009366 5.7e-23 111.7 168 41.1
Eucgr.I00600 Eucalyptus grandis HOM05D000106 ORTHO05D009366 7.4e-23 111.3 160 43.8
Haze_03929 Corylus avellana HOM05D000106 ORTHO05D009366 4.8e-22 108.6 152 46.1
FvH4_1g19010 Fragaria vesca HOM05D000106 ORTHO05D009366 4.8e-22 108.6 166 38.6
FAN19G1132 Fragaria x ananassa HOM05D000106 ORTHO05D009366 6.3e-22 108.2 166 38.6
FAN23G0168 Fragaria x ananassa HOM05D000106 ORTHO05D009366 6.3e-22 108.2 166 38.0
Sed0024314 Sechium edule HOM05D000106 ORTHO05D009366 6.3e-22 108.2 151 44.4
FAN28G0086 Fragaria x ananassa HOM05D000106 ORTHO05D009366 8.2e-22 107.8 166 38.0
PGR031G1960 Punica granatum HOM05D000106 ORTHO05D009366 3.1e-21 105.9 167 38.9
MD15G1307000 Malus domestica HOM05D000106 ORTHO05D009366 9.1e-21 104.4 168 39.3
HPP92_018476 Vanilla planifolia HOM05D000106 ORTHO05D009366 1.4e-18 97.1 174 35.1
Aqoxy5G01873 Aquilegia oxysepala HOM05D000106 ORTHO05D009366 9.4e-18 94.4 166 36.7
HPP92_018486 Vanilla planifolia HOM05D000106 ORTHO05D009366 1.2e-17 94.0 180 35.0
ATR0800G034 Amborella trichopoda HOM05D000106 ORTHO05D009366 7.4e-15 84.7 174 32.2
SEGI_29487 Sequoiadendron giganteum HOM05D000106 ORTHO05D009366 8.5e-11 71.2 169 34.9
RcHm_v2.0_Chr2g0110021 Rosa chinensis HOM05D000106 ORTHO05D009366 8.2e-06 54.7 60 45.0


User provided reference genes

Program Settings