Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1703.15 Capsicum annuum HOM05D005513 ORTHO05D006848 8.1e-45 183.3 91 100.0
CAN.G2107.3 Capsicum annuum HOM05D005513 ORTHO05D006848 8.1e-45 183.3 91 100.0
CAN.G1579.15 Capsicum annuum HOM05D005513 ORTHO05D006848 9.0e-44 179.9 91 97.8
CAN.G2075.11 Capsicum annuum HOM05D005513 ORTHO05D006848 2.6e-43 178.3 90 96.7
CAN.G575.103 Capsicum annuum HOM05D005513 ORTHO05D006848 7.6e-43 176.8 90 96.7
CAN.G575.118 Capsicum annuum HOM05D005513 ORTHO05D006848 7.1e-41 170.2 91 93.4
CAN.G2177.12 Capsicum annuum HOM05D005513 ORTHO05D006848 2.1e-40 168.7 91 92.3
CAN.G575.78 Capsicum annuum HOM05D005513 ORTHO05D006848 1.8e-39 165.6 91 90.1
Peaxi162Scf00544g00118 Petunia axillaris HOM05D005513 ORTHO05D006848 2.3e-39 165.2 91 89.0
CAN.G1565.3 Capsicum annuum HOM05D005513 ORTHO05D006848 3.0e-39 164.9 91 89.0
Nitab4.5_0001936g0090 Nicotiana tabacum HOM05D005513 ORTHO05D006848 1.1e-38 162.9 91 87.9
PGSC0003DMG400004444 Solanum tuberosum HOM05D005513 ORTHO05D006848 7.4e-38 160.2 92 87.0
Nitab4.5_0008882g0020 Nicotiana tabacum HOM05D005513 ORTHO05D006848 9.6e-38 159.8 91 85.7
Sopen12g019010 Solanum pennellii HOM05D005513 ORTHO05D006848 1.6e-37 159.1 92 85.9
Solyc12g038820.1 Solanum lycopersicum HOM05D005513 ORTHO05D006848 8.1e-37 156.8 92 84.8
CAN.G181.20 Capsicum annuum HOM05D005513 ORTHO05D006848 1.1e-36 156.4 91 85.7
Peaxi162Scf00544g00117 Petunia axillaris HOM05D005513 ORTHO05D006848 1.2e-35 152.9 91 85.7
Oeu057533.3 Olea europaea HOM05D005513 ORTHO05D006848 1.3e-34 149.4 91 80.2
Nn7g37504 Nelumbo nucifera HOM05D005513 ORTHO05D006848 2.2e-34 148.7 91 81.3
Dinv33223 Davidia involucrata HOM05D005513 ORTHO05D006848 6.4e-34 147.1 91 81.3
SGA_v2.0_scaffold122G33215 Striga asiatica HOM05D005513 ORTHO05D006848 8.4e-34 146.7 91 76.9
CAN.G12630.1 Capsicum annuum HOM05D005513 ORTHO05D006848 1.1e-33 146.4 79 92.4
Cc09_g04220 Coffea canephora HOM05D005513 ORTHO05D006848 1.1e-33 146.4 91 76.9
Cc00_g04390 Coffea canephora HOM05D005513 ORTHO05D006848 3.2e-33 144.8 91 75.8
Manes.05G132000 Manihot esculenta HOM05D005513 ORTHO05D006848 3.2e-33 144.8 91 80.2
GSVIVG01038190001 Vitis vinifera HOM05D005513 ORTHO05D006848 4.2e-33 144.4 91 79.1
COL.COLO4_08197 Corchorus olitorius HOM05D005513 ORTHO05D006848 5.5e-33 144.1 91 81.3
Phvul.003G059600 Phaseolus vulgaris HOM05D005513 ORTHO05D006848 1.6e-32 142.5 91 78.0
TPR.G23516 Trifolium pratense HOM05D005513 ORTHO05D006848 1.6e-32 142.5 91 78.0
Ca_18624_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 2.7e-32 141.7 91 76.9
Ca_18630_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 2.7e-32 141.7 91 76.9
Lj4g0013603 Lotus japonicus HOM05D005513 ORTHO05D006848 3.5e-32 141.4 91 76.9
Medtr4g087590 Medicago truncatula HOM05D005513 ORTHO05D006848 3.5e-32 141.4 91 76.9
VMungo0251G3259 Vigna mungo HOM05D005513 ORTHO05D006848 4.6e-32 141.0 91 76.9
TAR362G0948 Trochodendron aralioides HOM05D005513 ORTHO05D006848 6.0e-32 140.6 91 75.8
CANSAT56G3287 Cannabis sativa HOM05D005513 ORTHO05D006848 7.9e-32 140.2 91 76.9
Sed0010820 Sechium edule HOM05D005513 ORTHO05D006848 7.9e-32 140.2 91 78.0
Duzib151G0764 Durio zibethinus HOM05D005513 ORTHO05D006848 1.0e-31 139.8 91 78.0
Lalb_Chr16g0384361 Lupinus albus HOM05D005513 ORTHO05D006848 1.0e-31 139.8 91 75.8
Cfa015273 Carpinus fangiana HOM05D005513 ORTHO05D006848 1.8e-31 139.0 91 76.9
Migut.F01838 Erythranthe guttata HOM05D005513 ORTHO05D006848 1.8e-31 139.0 91 75.8
TWI38G0850 Tripterygium wilfordii HOM05D005513 ORTHO05D006848 1.8e-31 139.0 91 75.8
MELO3C011447.2 Cucumis melo HOM05D005513 ORTHO05D006848 2.3e-31 138.7 91 78.0
Gohir.D10G121000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 2.3e-31 138.7 91 76.9
Gorai.011G132900 Gossypium raimondii HOM05D005513 ORTHO05D006848 2.3e-31 138.7 91 76.9
QL10p057731 Quercus lobata HOM05D005513 ORTHO05D006848 2.3e-31 138.7 90 77.8
Actinidia11441 Actinidia chinensis HOM05D005513 ORTHO05D006848 3.0e-31 138.3 91 75.8
Sabra19G0110200 Salix brachista HOM05D005513 ORTHO05D006848 3.0e-31 138.3 91 78.0
Thecc.04G162400 Theobroma cacao HOM05D005513 ORTHO05D006848 3.0e-31 138.3 91 78.0
Ciclev10021262m.g Citrus clementina HOM05D005513 ORTHO05D006848 3.9e-31 137.9 91 76.9
Glyma.07G206300 Glycine max HOM05D005513 ORTHO05D006848 3.9e-31 137.9 90 75.6
Lj6A58T48 Lonicera japonica HOM05D005513 ORTHO05D006848 3.9e-31 137.9 93 77.4
Potri.019G099100 Populus trichocarpa HOM05D005513 ORTHO05D006848 3.9e-31 137.9 91 78.0
Gohir.A10G146000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 5.1e-31 137.5 91 75.8
Prupe.7G267200 Prunus persica HOM05D005513 ORTHO05D006848 5.1e-31 137.5 91 74.7
QL10p057421 Quercus lobata HOM05D005513 ORTHO05D006848 5.1e-31 137.5 90 76.7
SalBow3G2273 Salvia bowleyana HOM05D005513 ORTHO05D006848 5.1e-31 137.5 91 75.8
Aqoxy2G04162 Aquilegia oxysepala HOM05D005513 ORTHO05D006848 6.7e-31 137.1 91 75.8
Cpa.g.sc343.3 Carica papaya HOM05D005513 ORTHO05D006848 6.7e-31 137.1 91 74.7
Glyma.02G138700 Glycine max HOM05D005513 ORTHO05D006848 8.7e-31 136.7 91 73.6
Atru.chr4.1482 Acer truncatum HOM05D005513 ORTHO05D006848 1.1e-30 136.3 91 73.6
Os08g0542600 Oryza sativa ssp. japonica HOM05D005513 ORTHO05D006848 1.1e-30 136.3 91 68.1
Atru.BG.100.p Acer truncatum HOM05D005513 ORTHO05D006848 1.5e-30 136.0 90 73.3
Lsat_1_v5_gn_2_40261 Lactuca sativa HOM05D005513 ORTHO05D006848 1.5e-30 136.0 91 76.9
CiPaw.01G170000 Carya illinoinensis HOM05D005513 ORTHO05D006848 1.9e-30 135.6 91 75.8
Haze_01354 Corylus avellana HOM05D005513 ORTHO05D006848 1.9e-30 135.6 91 74.7
arahy.Tifrunner.gnm1.ann1.GWB5D5 Arachis hypogaea HOM05D005513 ORTHO05D006848 2.5e-30 135.2 91 73.6
FvH4_1g00490 Fragaria vesca HOM05D005513 ORTHO05D006848 2.5e-30 135.2 91 72.5
Psat7g119320 Pisum sativum HOM05D005513 ORTHO05D006848 2.5e-30 135.2 91 73.6
arahy.Tifrunner.gnm1.ann1.GC3WT6 Arachis hypogaea HOM05D005513 ORTHO05D006848 3.3e-30 134.8 91 73.6
CsaV3_6G032350 Cucumis sativus L. HOM05D005513 ORTHO05D006848 3.3e-30 134.8 91 75.8
FAN23G0174 Fragaria x ananassa HOM05D005513 ORTHO05D006848 4.3e-30 134.4 91 73.6
Sed0015185 Sechium edule HOM05D005513 ORTHO05D006848 4.3e-30 134.4 91 75.8
MSTRG.8188 Avicennia marina HOM05D005513 ORTHO05D006848 5.6e-30 134.0 91 73.6
FAN28G1408 Fragaria x ananassa HOM05D005513 ORTHO05D006848 5.6e-30 134.0 91 72.5
RhsimUnG0015400 Rhododendron simsii HOM05D005513 ORTHO05D006848 7.4e-30 133.7 91 73.6
FAN26G1480 Fragaria x ananassa HOM05D005513 ORTHO05D006848 9.6e-30 133.3 91 72.5
RcHm_v2.0_Chr2g0085091 Rosa chinensis HOM05D005513 ORTHO05D006848 9.6e-30 133.3 91 74.7
HanXRQChr10g0285921 Helianthus annuus HOM05D005513 ORTHO05D006848 1.3e-29 132.9 91 75.8
MD15G1148400 Malus domestica HOM05D005513 ORTHO05D006848 1.3e-29 132.9 91 72.5
ATR0743G005 Amborella trichopoda HOM05D005513 ORTHO05D006848 1.6e-29 132.5 91 69.2
Rhsim02G0085900 Rhododendron simsii HOM05D005513 ORTHO05D006848 1.6e-29 132.5 91 73.6
CSS0028849 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 2.8e-29 131.7 91 71.4
Lj6A199G41 Lonicera japonica HOM05D005513 ORTHO05D006848 2.8e-29 131.7 93 76.3
vmacro15699 Vaccinium macrocarpon HOM05D005513 ORTHO05D006848 2.8e-29 131.7 91 71.4
CSS0036954 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 6.2e-29 130.6 91 70.3
Hund12358 Selenicereus undatus HOM05D005513 ORTHO05D006848 6.2e-29 130.6 91 69.2
Sc19g0006410 Simmondsia chinensis HOM05D005513 ORTHO05D006848 6.2e-29 130.6 91 73.6
Zm00001eb037350 Zea mays HOM05D005513 ORTHO05D006848 1.1e-28 129.8 88 68.2
HPP92_011686 Vanilla planifolia HOM05D005513 ORTHO05D006848 1.8e-28 129.0 91 69.2
HPP92_011691 Vanilla planifolia HOM05D005513 ORTHO05D006848 1.8e-28 129.0 91 69.2
CAN.G2075.13 Capsicum annuum HOM05D005513 ORTHO05D006848 2.4e-28 128.6 76 88.2
AUR62021707 Chenopodium quinoa HOM05D005513 ORTHO05D006848 3.1e-28 128.3 91 70.3
Eucgr.G01603 Eucalyptus grandis HOM05D005513 ORTHO05D006848 5.3e-28 127.5 91 72.5
AUR62002417 Chenopodium quinoa HOM05D005513 ORTHO05D006848 9.0e-28 126.7 91 69.2
PSO675G7310 Papaver somniferum HOM05D005513 ORTHO05D006848 9.0e-28 126.7 92 69.6
EL10Ac3g06111 Beta vulgaris HOM05D005513 ORTHO05D006848 1.2e-27 126.3 91 68.1
PSO541G5416 Papaver somniferum HOM05D005513 ORTHO05D006848 2.0e-27 125.6 92 69.6
Eucgr.L00024 Eucalyptus grandis HOM05D005513 ORTHO05D006848 2.6e-27 125.2 91 71.4
THA.LOC104801693 Tarenaya hassleriana HOM05D005513 ORTHO05D006848 2.6e-27 125.2 91 68.1
PGR042G2305 Punica granatum HOM05D005513 ORTHO05D006848 3.4e-27 124.8 91 69.2
Nitab4.5_0002604g0050 Nicotiana tabacum HOM05D005513 ORTHO05D006848 1.7e-26 122.5 85 77.6
AUR62023772 Chenopodium quinoa HOM05D005513 ORTHO05D006848 2.2e-26 122.1 91 68.1
Aa31LG3G16700 Aethionema arabicum HOM05D005513 ORTHO05D006848 3.8e-26 121.3 91 64.8
Nitab4.5_0000241g0250 Nicotiana tabacum HOM05D005513 ORTHO05D006848 4.9e-26 120.9 87 77.0
Atru.chr4.1511 Acer truncatum HOM05D005587 ORTHO05D007287 2.5e-25 118.6 82 72.0
Thhalv10014198m.g Eutrema salsugineum HOM05D005513 ORTHO05D006848 2.5e-25 118.6 91 65.9
Medtr4g087600 Medicago truncatula HOM05D005513 ORTHO05D006848 4.2e-25 117.9 84 70.2
AL6G20970 Arabidopsis lyrata HOM05D005513 ORTHO05D006848 7.1e-25 117.1 91 63.7
Sp6g32980 Schrenkiella parvula HOM05D005513 ORTHO05D006848 9.3e-25 116.7 91 62.6
AT5G10460 Arabidopsis thaliana HOM05D005513 ORTHO05D006848 1.6e-24 115.9 91 62.6
BcaB05g21485 Brassica carinata HOM05D005513 ORTHO05D006848 3.5e-24 114.8 92 63.0
A02p00500 Brassica napus HOM05D005513 ORTHO05D006848 3.5e-24 114.8 92 64.1
C02p04480 Brassica napus HOM05D005513 ORTHO05D006848 3.5e-24 114.8 92 63.0
BraA02t05034Z Brassica rapa HOM05D005513 ORTHO05D006848 4.6e-24 114.4 92 63.0
BolC2t06408H Brassica oleracea HOM05D005513 ORTHO05D006848 1.0e-23 113.2 92 62.0
Carub.0006s0894 Capsella rubella HOM05D005513 ORTHO05D006848 1.0e-23 113.2 92 63.0
SEGI_26385 Sequoiadendron giganteum HOM05D005513 ORTHO05D006848 1.8e-23 112.5 91 56.0
ECA238G0802 Erigeron canadensis HOM05D005513 ORTHO05D006848 5.1e-23 110.9 76 76.3
CARHR202830 Cardamine hirsuta HOM05D005513 ORTHO05D006848 1.1e-22 109.8 92 62.0
Lj6C203G2 Lonicera japonica HOM05D005513 ORTHO05D006848 3.7e-21 104.8 77 72.7
RcHm_v2.0_Chr2g0085051 Rosa chinensis HOM05D005513 ORTHO05D343180 2.6e-19 98.6 85 63.5
BcaC03g13313 Brassica carinata HOM05D005513 ORTHO05D006848 1.0e-18 96.7 92 56.5
SMO119G0305 Selaginella moellendorffii HOM05D005513 ORTHO05D006848 7.2e-17 90.5 91 48.4
MCO04G248 Micromonas commoda HOM05D005513 ORTHO05D006848 4.3e-14 81.3 104 42.3
ClCG08G010170 Citrullus lanatus HOM05D005513 ORTHO05D006848 6.9e-12 73.9 57 66.7
SHI25989 Sapria himalayana HOM05D000105 ORTHO05D000023 1.9e-09 65.9 85 47.1
Cre14.g609300 Chlamydomonas reinhardtii HOM05D005513 ORTHO05D006848 4.4e-06 54.7 56 44.6
PRCOL_00005454 Prasinoderma coloniale HOM05D005513 ORTHO05D006848 4.4e-06 54.7 93 40.9


User provided reference genes

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