Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 1.9e-133 479.2 242 100.0
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 7.6e-90 334.3 244 73.0
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 5.4e-88 328.2 243 74.5
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 1.8e-83 313.2 238 69.7
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 6.9e-83 311.2 244 69.3
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 1.1e-69 267.3 236 64.0
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 2.1e-31 140.2 240 42.1
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 2.0e-29 133.7 236 39.0
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 5.2e-22 109.0 210 36.7
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 5.2e-22 109.0 246 37.4
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 7.5e-21 105.1 210 39.0
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 3.1e-19 99.8 253 35.6
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 5.4e-19 99.0 241 35.3
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 9.1e-19 98.2 240 35.0
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 3.5e-18 96.3 248 35.1
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 4.5e-18 95.9 254 34.6
Cc02_g16960 Coffea canephora HOM05D000120 ORTHO05D009410 5.9e-18 95.5 229 37.1
TAR376G0786 Trochodendron aralioides HOM05D000120 ORTHO05D009410 1.0e-17 94.7 246 34.6
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 1.7e-17 94.0 252 32.1
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 1.7e-17 94.0 240 34.6
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 2.2e-17 93.6 250 34.4
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 3.8e-17 92.8 239 36.8
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 5.0e-17 92.4 231 32.9
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 1.5e-16 90.9 253 30.8
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 3.2e-16 89.7 235 32.3
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 7.2e-16 88.6 245 34.3
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 9.4e-16 88.2 254 32.3
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 1.6e-15 87.4 260 30.4
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 1.6e-15 87.4 240 35.8
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 2.1e-15 87.0 242 31.8
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 4.7e-15 85.9 250 32.8
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 4.7e-15 85.9 259 29.3
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 8.0e-15 85.1 241 28.2
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 1.0e-14 84.7 245 31.4
CANSAT11G1664 Cannabis sativa HOM05D000120 ORTHO05D009410 2.3e-14 83.6 252 33.3
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 2.3e-14 83.6 242 31.8
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 3.0e-14 83.2 242 30.2
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 3.0e-14 83.2 242 31.8
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 4.0e-14 82.8 241 31.5
PGR042G1442 Punica granatum HOM05D000120 ORTHO05D009410 5.2e-14 82.4 214 32.2
TAR628G1238 Trochodendron aralioides HOM05D000120 ORTHO05D009410 5.2e-14 82.4 249 32.1
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 6.8e-14 82.0 248 31.5
Migut.B00178 Erythranthe guttata HOM05D000120 ORTHO05D009410 1.2e-13 81.3 208 36.5
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 1.2e-13 81.3 242 31.4
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 1.5e-13 80.9 246 30.5
Sc08g0000840 Simmondsia chinensis HOM05D000120 ORTHO05D009410 7.5e-13 78.6 240 31.2
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 9.8e-13 78.2 262 27.9
PSO210G7327 Papaver somniferum HOM05D000120 ORTHO05D009410 1.3e-12 77.8 221 30.8
Cpa.g.sc150.20 Carica papaya HOM05D000120 ORTHO05D009410 4.9e-12 75.9 243 32.1
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 4.9e-12 75.9 184 32.1
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 4.9e-12 75.9 251 31.5
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 4.9e-12 75.9 240 29.6
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 1.4e-11 74.3 248 29.8
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 1.8e-11 73.9 240 32.9
unitig_747.g21207 Utricularia gibba HOM05D000120 ORTHO05D009410 1.8e-11 73.9 223 30.0
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 2.4e-11 73.6 213 31.9
ClCG02G004590 Citrullus lanatus HOM05D000120 ORTHO05D009410 3.1e-11 73.2 235 32.8
CsaV3_7G000360 Cucumis sativus L. HOM05D000120 ORTHO05D009410 4.1e-11 72.8 231 30.7
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 7.0e-11 72.0 237 29.5
MELO3C002789.2 Cucumis melo HOM05D000120 ORTHO05D009410 9.2e-11 71.6 231 31.6
FAN27G2529 Fragaria x ananassa HOM05D000120 ORTHO05D009410 9.2e-11 71.6 202 31.7
Duzib052G0028 Durio zibethinus HOM05D000120 ORTHO05D009410 1.6e-10 70.9 248 31.0
SGA_v2.0_scaffold32G13221 Striga asiatica HOM05D000120 ORTHO05D009410 2.0e-10 70.5 232 30.6
SalBow6G2916 Salvia bowleyana HOM05D000120 ORTHO05D009410 2.7e-10 70.1 289 27.0
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 3.5e-10 69.7 214 30.4
Sed0016080 Sechium edule HOM05D000120 ORTHO05D009410 3.5e-10 69.7 264 29.2
Aqoxy5G01485 Aquilegia oxysepala HOM05D000120 ORTHO05D009410 5.9e-10 68.9 244 27.5
Glyma.06G246300 Glycine max HOM05D000120 ORTHO05D009410 7.7e-10 68.6 275 28.7
Nn7g36692 Nelumbo nucifera HOM05D000120 ORTHO05D009410 1.0e-09 68.2 220 30.5
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 3.8e-09 66.2 235 28.1
Os02g0469000 Oryza sativa ssp. japonica HOM05D000120 ORTHO05D009410 5.6e-08 62.4 235 26.4
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 5.6e-08 62.4 180 32.8
Gorai.008G031900 Gossypium raimondii HOM05D000120 ORTHO05D009410 1.2e-07 61.2 329 24.9
Gohir.A12G041200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 1.6e-07 60.8 329 25.8
Sabra04G0109000 Salix brachista HOM05D000120 ORTHO05D009410 6.1e-07 58.9 232 27.6
Sp7g36860 Schrenkiella parvula HOM05D011065 ORTHO05D009410 8.0e-07 58.5 268 27.6
Sed0018675 Sechium edule HOM05D000120 ORTHO05D009410 1.4e-06 57.8 269 26.8
Gohir.D12G031200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 3.0e-06 56.6 197 28.4
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 3.0e-06 56.6 264 28.4
arahy.Tifrunner.gnm1.ann1.T5BQ73 Arachis hypogaea HOM05D000120 ORTHO05D009410 4.0e-06 56.2 81 39.5
CiPaw.06G128400 Carya illinoinensis HOM05D000120 ORTHO05D009410 5.2e-06 55.8 245 27.3
Zm00001eb180650 Zea mays HOM05D000120 ORTHO05D009410 6.8e-06 55.5 251 27.5
A08p23900 Brassica napus HOM05D011065 ORTHO05D009410 8.9e-06 55.1 259 27.0


User provided reference genes

Program Settings