Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G170.57 Capsicum annuum HOM05D006557 ORTHO05D008177 5.5e-81 304.3 158 100.0
Sopen01g037630 Solanum pennellii HOM05D006557 ORTHO05D008177 2.8e-53 212.2 135 82.2
Solyc01g091860.4 Solanum lycopersicum HOM05D006557 ORTHO05D008177 4.8e-53 211.5 135 80.7
PGSC0003DMG400000131 Solanum tuberosum HOM05D006557 ORTHO05D008177 9.1e-52 207.2 137 81.0
Nitab4.5_0006706g0040 Nicotiana tabacum HOM05D006557 ORTHO05D008177 3.6e-48 195.3 162 69.1
Peaxi162Scf00021g00314 Petunia axillaris HOM05D006557 ORTHO05D008177 6.1e-48 194.5 151 70.2
Nitab4.5_0009025g0010 Nicotiana tabacum HOM05D006557 ORTHO05D008177 2.3e-47 192.6 162 67.9
Oeu058605.1 Olea europaea HOM05D006557 ORTHO05D008177 9.5e-41 170.6 134 64.9
Actinidia33449 Actinidia chinensis HOM05D006557 ORTHO05D008177 6.1e-40 167.9 129 69.8
Nn6g34278 Nelumbo nucifera HOM05D006557 ORTHO05D008177 6.8e-39 164.5 134 64.2
Cc02_g37160 Coffea canephora HOM05D006557 ORTHO05D008177 4.4e-38 161.8 134 66.4
ECA236G4623 Erigeron canadensis HOM05D006557 ORTHO05D008177 2.2e-37 159.5 132 65.9
DCAR_008582 Daucus carota HOM05D006557 ORTHO05D008177 4.9e-37 158.3 128 70.3
QL08p050821 Quercus lobata HOM05D006557 ORTHO05D008177 4.9e-37 158.3 135 65.2
GSVIVG01026363001 Vitis vinifera HOM05D006557 ORTHO05D008177 1.1e-36 157.1 126 66.7
CSS0001854 Camellia sinensis var. sinensis HOM05D006557 ORTHO05D008177 2.4e-36 156.0 127 66.1
Manes.01G262900 Manihot esculenta HOM05D006557 ORTHO05D008177 4.1e-36 155.2 126 65.9
Haze_15235 Corylus avellana HOM05D006557 ORTHO05D008177 5.4e-36 154.8 150 58.7
Rhsim01G0154800 Rhododendron simsii HOM05D006557 ORTHO05D008177 5.4e-36 154.8 136 62.5
MBI04_g40842_MAGBIO Magnolia biondii HOM05D006557 ORTHO05D008177 7.0e-36 154.5 135 60.0
Cfa004174 Carpinus fangiana HOM05D006557 ORTHO05D008177 9.2e-36 154.1 150 58.7
TAR375G0852 Trochodendron aralioides HOM05D006557 ORTHO05D008177 1.6e-35 153.3 134 62.7
Gohir.D07G150201 Gossypium hirsutum HOM05D006557 ORTHO05D008177 2.7e-35 152.5 119 65.5
TPR.G37774 Trifolium pratense HOM05D006557 ORTHO05D008177 3.5e-35 152.1 120 64.2
MSTRG.17229 Avicennia marina HOM05D006557 ORTHO05D008177 4.5e-35 151.8 137 62.0
Gorai.001G172000 Gossypium raimondii HOM05D006557 ORTHO05D008177 5.9e-35 151.4 119 64.7
RcHm_v2.0_Chr1g0352061 Rosa chinensis HOM05D006557 ORTHO05D008177 5.9e-35 151.4 140 59.3
Sc02g0002240 Simmondsia chinensis HOM05D006557 ORTHO05D008177 7.7e-35 151.0 119 63.9
Aqoxy7G00469 Aquilegia oxysepala HOM05D006557 ORTHO05D008177 1.3e-34 150.2 127 63.0
Gohir.A07G144300 Gossypium hirsutum HOM05D006557 ORTHO05D008177 1.3e-34 150.2 119 64.7
Thecc.01G369600 Theobroma cacao HOM05D006557 ORTHO05D008177 3.8e-34 148.7 119 67.2
HanXRQChr04g0121771 Helianthus annuus HOM05D006557 ORTHO05D008177 5.0e-34 148.3 121 66.1
Medtr7g076590 Medicago truncatula HOM05D006557 ORTHO05D008177 5.0e-34 148.3 120 63.3
vmacro04846 Vaccinium macrocarpon HOM05D006557 ORTHO05D008177 5.0e-34 148.3 152 58.6
CiPaw.01G052200 Carya illinoinensis HOM05D006557 ORTHO05D008177 6.6e-34 147.9 125 67.2
Duzib133G0555 Durio zibethinus HOM05D006557 ORTHO05D008177 6.6e-34 147.9 128 61.7
Lsat_1_v5_gn_7_8181 Lactuca sativa HOM05D006557 ORTHO05D008177 1.1e-33 147.1 126 61.1
FAN10G2465 Fragaria x ananassa HOM05D006557 ORTHO05D008177 1.9e-33 146.4 137 59.9
Sabra14G0054700 Salix brachista HOM05D006557 ORTHO05D008177 1.9e-33 146.4 122 63.1
Psat3g112120 Pisum sativum HOM05D006557 ORTHO05D008177 2.5e-33 146.0 120 60.8
Prupe.2G153600 Prunus persica HOM05D006557 ORTHO05D008177 2.5e-33 146.0 142 56.3
FAN06G2259 Fragaria x ananassa HOM05D006557 ORTHO05D008177 3.3e-33 145.6 137 59.9
FvH4_7g12930 Fragaria vesca HOM05D006557 ORTHO05D008177 4.3e-33 145.2 136 59.6
FAN06G3640 Fragaria x ananassa HOM05D006557 ORTHO05D008177 5.6e-33 144.8 126 64.3
PSO478G0993 Papaver somniferum HOM05D006557 ORTHO05D008177 1.2e-32 143.7 130 60.8
Atru.chr5.390 Acer truncatum HOM05D006557 ORTHO05D008177 1.6e-32 143.3 137 56.2
Atru.chr5.396 Acer truncatum HOM05D006557 ORTHO05D008177 1.6e-32 143.3 137 56.2
Glyma.18G228300 Glycine max HOM05D006557 ORTHO05D008177 1.6e-32 143.3 126 59.5
CANSAT56G3931 Cannabis sativa HOM05D006557 ORTHO05D008177 2.1e-32 142.9 126 60.3
arahy.Tifrunner.gnm1.ann1.P0RXA9 Arachis hypogaea HOM05D006557 ORTHO05D008177 2.8e-32 142.5 124 61.3
Phvul.008G069900 Phaseolus vulgaris HOM05D006557 ORTHO05D008177 2.8e-32 142.5 126 58.7
Sed0001202 Sechium edule HOM05D006557 ORTHO05D008177 2.8e-32 142.5 157 52.9
FAN03G1058 Fragaria x ananassa HOM05D006557 ORTHO05D008177 3.6e-32 142.1 137 58.4
FAN01G0615 Fragaria x ananassa HOM05D006557 ORTHO05D008177 4.7e-32 141.7 137 57.7
EL10Ac1g00969 Beta vulgaris HOM05D006557 ORTHO05D008177 6.1e-32 141.4 135 55.6
AUR62033372 Chenopodium quinoa HOM05D006557 ORTHO05D008177 8.0e-32 141.0 121 60.3
Lalb_Chr01g0021061 Lupinus albus HOM05D006557 ORTHO05D008177 1.0e-31 140.6 122 60.7
SalBow3G2355 Salvia bowleyana HOM05D006557 ORTHO05D008177 1.0e-31 140.6 126 61.9
CsaV3_6G041250 Cucumis sativus L. HOM05D006557 ORTHO05D008177 1.4e-31 140.2 156 51.9
Potri.014G077700 Populus trichocarpa HOM05D006557 ORTHO05D008177 1.4e-31 140.2 122 59.8
PGR042G0062 Punica granatum HOM05D006557 ORTHO05D008177 1.8e-31 139.8 133 56.4
MELO3C024600.2 Cucumis melo HOM05D006557 ORTHO05D008177 2.3e-31 139.4 156 50.6
Hund27329 Selenicereus undatus HOM05D006557 ORTHO05D008177 3.0e-31 139.0 119 59.7
ClCG01G015140 Citrullus lanatus HOM05D006557 ORTHO05D008177 4.0e-31 138.7 157 51.6
Ciclev10019481m.g Citrus clementina HOM05D006557 ORTHO05D008177 6.8e-31 137.9 134 58.2
Aa31LG1G11240 Aethionema arabicum HOM05D006557 ORTHO05D008177 8.9e-31 137.5 123 60.2
C08p53930 Brassica napus HOM05D006557 ORTHO05D008177 1.2e-30 137.1 118 60.2
BolC8t52906H Brassica oleracea HOM05D006557 ORTHO05D008177 1.2e-30 137.1 118 60.2
AL1G10410 Arabidopsis lyrata HOM05D006557 ORTHO05D008177 1.5e-30 136.7 118 61.0
AUR62004285 Chenopodium quinoa HOM05D006557 ORTHO05D008177 2.0e-30 136.3 118 61.9
Lj1g0000530 Lotus japonicus HOM05D006557 ORTHO05D008177 2.0e-30 136.3 128 53.9
Eucgr.E00220 Eucalyptus grandis HOM05D006557 ORTHO05D008177 2.6e-30 136.0 123 58.5
Migut.B01677 Erythranthe guttata HOM05D006557 ORTHO05D008177 7.5e-30 134.4 135 55.6
Glyma.09G263800 Glycine max HOM05D006557 ORTHO05D008177 7.5e-30 134.4 126 55.6
BraA09t42268Z Brassica rapa HOM05D006557 ORTHO05D008177 9.8e-30 134.0 118 59.3
Carub.0001s0032 Capsella rubella HOM05D006557 ORTHO05D008177 9.8e-30 134.0 116 62.1
CARHR000440 Cardamine hirsuta HOM05D006557 ORTHO05D008177 1.1e-28 130.6 119 58.0
Sp1g00380 Schrenkiella parvula HOM05D006557 ORTHO05D008177 1.1e-28 130.6 118 58.5
TWI23G0976 Tripterygium wilfordii HOM05D006557 ORTHO05D008177 7.0e-28 127.9 113 61.1
Thhalv10007294m.g Eutrema salsugineum HOM05D006557 ORTHO05D008177 9.2e-28 127.5 119 59.7
FAN10G0459 Fragaria x ananassa HOM05D006557 ORTHO05D008177 1.3e-26 123.6 134 51.5
HPP92_025494 Vanilla planifolia HOM05D006557 ORTHO05D008177 1.7e-26 123.2 126 54.0
CDE11G0468 Ceratophyllum demersum HOM05D006557 ORTHO05D008177 1.6e-24 116.7 141 46.8
SEGI_15167 Sequoiadendron giganteum HOM05D006557 ORTHO05D008177 3.6e-24 115.5 132 50.0
Zm00001eb269430 Zea mays HOM05D006557 ORTHO05D008177 2.0e-22 109.8 116 51.7
Os06g0127200 Oryza sativa ssp. japonica HOM05D006557 ORTHO05D008177 5.8e-22 108.2 128 46.9
ATR0757G115 Amborella trichopoda HOM05D006557 ORTHO05D008177 7.5e-22 107.8 134 49.3
Pp3c20_15200 Physcomitrium patens HOM05D006557 ORTHO05D008177 2.9e-21 105.9 115 53.0
AagrBONN_evm.TU.Sc2ySwM_228.962 Anthoceros agrestis HOM05D006557 ORTHO05D008177 1.4e-20 103.6 128 46.1
COL.COLO4_12633 Corchorus olitorius HOM05D006557 ORTHO05D008177 7.8e-19 97.8 77 62.3
Mapoly0052s0068 Marchantia polymorpha HOM05D006557 ORTHO05D008177 1.5e-17 93.6 118 43.2
unitig_8.g3814 Utricularia gibba HOM05D006557 ORTHO05D008177 1.5e-17 93.6 130 43.8
HPP92_025368 Vanilla planifolia HOM05D006557 ORTHO05D008177 2.5e-17 92.8 108 48.1
SMO165G0089 Selaginella moellendorffii HOM05D006557 ORTHO05D008177 1.8e-15 86.7 105 43.8
Ca_26123_v3 Cicer arietinum L. HOM05D006557 ORTHO05D008177 8.9e-15 84.3 71 57.7
Lj9A576G31 Lonicera japonica HOM05D006557 ORTHO05D008177 1.2e-14 84.0 77 62.3
Dinv32417 Davidia involucrata HOM05D006557 ORTHO05D008177 2.4e-12 76.3 52 75.0
Hma1.2p1_0033F.1_g020720 Hydrangea macrophylla HOM05D006557 ORTHO05D008177 2.4e-12 76.3 55 63.6
Lj9A576T36 Lonicera japonica HOM05D006557 ORTHO05D008177 5.4e-12 75.1 55 65.5
MD02G1195000 Malus domestica HOM05D006557 ORTHO05D008177 1.6e-11 73.6 106 44.3
CSS0034846 Camellia sinensis var. sinensis HOM05D006557 ORTHO05D008177 7.3e-09 64.7 43 69.8
unitig_31.g34034 Utricularia gibba HOM05D006557 ORTHO05D008177 1.2e-08 63.9 55 58.2
HPP92_025543 Vanilla planifolia HOM05D006557 ORTHO05D008177 6.8e-07 58.2 72 45.8


User provided reference genes

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