Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G170.107 Capsicum annuum HOM05D000623 ORTHO05D007511 1.7e-99 365.9 172 100.0
Solyc11g013840.3 Solanum lycopersicum HOM05D000623 ORTHO05D007511 1.7e-64 249.6 294 50.0
Sopen11g008760 Solanum pennellii HOM05D000623 ORTHO05D007511 1.7e-64 249.6 294 50.0
PGSC0003DMG400030213 Solanum tuberosum HOM05D000623 ORTHO05D007511 8.6e-64 247.3 294 50.7
CAN.G680.13 Capsicum annuum HOM05D000623 ORTHO05D007511 6.2e-62 241.1 294 49.0
Nitab4.5_0000051g0040 Nicotiana tabacum HOM05D000623 ORTHO05D007511 5.2e-61 238.0 294 49.0
Nitab4.5_0004159g0040 Nicotiana tabacum HOM05D000623 ORTHO05D007511 7.1e-58 227.6 294 47.3
Peaxi162Scf00476g00634 Petunia axillaris HOM05D000623 ORTHO05D007511 3.5e-57 225.3 293 44.4
Dinv27401 Davidia involucrata HOM05D000623 ORTHO05D007511 9.6e-55 217.2 293 43.0
vmacro12517 Vaccinium macrocarpon HOM05D000623 ORTHO05D007511 2.1e-54 216.1 265 45.3
Nn5g27887 Nelumbo nucifera HOM05D000623 ORTHO05D007511 1.4e-53 213.4 293 42.3
Hma1.2p1_0138F.1_g062880 Hydrangea macrophylla HOM05D000623 ORTHO05D007511 6.9e-53 211.1 294 42.9
CSS0036602 Camellia sinensis var. sinensis HOM05D000623 ORTHO05D007511 1.2e-52 210.3 293 41.6
DCAR_014272 Daucus carota HOM05D000623 ORTHO05D007511 4.5e-52 208.4 293 40.6
Migut.C01205 Erythranthe guttata HOM05D000623 ORTHO05D007511 9.9e-52 207.2 295 41.0
TAR381G0247 Trochodendron aralioides HOM05D000623 ORTHO05D007511 2.2e-51 206.1 293 39.6
GSVIVG01036850001 Vitis vinifera HOM05D000623 ORTHO05D007511 3.8e-51 205.3 292 41.1
MD10G1044300 Malus domestica HOM05D000623 ORTHO05D007511 4.9e-51 204.9 293 40.6
Prupe.8G050800 Prunus persica HOM05D000623 ORTHO05D007511 8.4e-51 204.1 293 41.0
Actinidia23311 Actinidia chinensis HOM05D000623 ORTHO05D007511 1.1e-50 203.8 293 42.0
QL02p034778 Quercus lobata HOM05D000623 ORTHO05D007511 1.4e-50 203.4 292 38.7
MBI17_g15291_MAGBIO Magnolia biondii HOM05D000623 ORTHO05D007511 1.9e-50 203.0 293 40.3
MD05G1038500 Malus domestica HOM05D000623 ORTHO05D007511 2.4e-50 202.6 293 39.6
TWI39G1017 Tripterygium wilfordii HOM05D000623 ORTHO05D007511 2.4e-50 202.6 293 39.6
Hma1.2p1_0374F.1_g138470 Hydrangea macrophylla HOM05D000623 ORTHO05D007511 3.2e-50 202.2 294 40.5
Oeu030016.1 Olea europaea HOM05D000623 ORTHO05D007511 3.2e-50 202.2 294 40.1
CANSAT25G0882 Cannabis sativa HOM05D000623 ORTHO05D007511 7.1e-50 201.1 296 40.5
Eucgr.F02636 Eucalyptus grandis HOM05D000623 ORTHO05D007511 7.1e-50 201.1 292 39.4
SGA_v2.0_scaffold118G32451 Striga asiatica HOM05D000623 ORTHO05D007511 7.1e-50 201.1 293 40.3
Cc02_g28590 Coffea canephora HOM05D000623 ORTHO05D007511 9.3e-50 200.7 294 39.1
SalBow7G4524 Salvia bowleyana HOM05D000623 ORTHO05D007511 9.3e-50 200.7 293 40.6
TPR.G30579 Trifolium pratense HOM05D000623 ORTHO05D007511 9.3e-50 200.7 293 42.3
arahy.Tifrunner.gnm1.ann1.4051GE Arachis hypogaea HOM05D000623 ORTHO05D007511 1.2e-49 200.3 293 40.6
arahy.Tifrunner.gnm1.ann1.45WQWH Arachis hypogaea HOM05D000623 ORTHO05D007511 2.1e-49 199.5 293 40.3
Lj5g0022310 Lotus japonicus HOM05D000623 ORTHO05D007511 2.1e-49 199.5 293 41.3
Hund27068 Selenicereus undatus HOM05D000623 ORTHO05D007511 2.1e-49 199.5 293 38.6
VMungo0720G2864 Vigna mungo HOM05D000623 ORTHO05D007511 2.1e-49 199.5 293 40.3
Glyma.20G173400 Glycine max HOM05D000623 ORTHO05D007511 3.5e-49 198.7 294 40.8
Dinv09568 Davidia involucrata HOM05D000623 ORTHO05D007511 4.6e-49 198.4 293 39.9
MELO3C013184.2 Cucumis melo HOM05D000623 ORTHO05D007511 6.0e-49 198.0 294 40.8
Haze_17877 Corylus avellana HOM05D000623 ORTHO05D007511 7.9e-49 197.6 293 41.0
FAN20G3078 Fragaria x ananassa HOM05D000623 ORTHO05D007511 7.9e-49 197.6 293 38.6
vmacro05575 Vaccinium macrocarpon HOM05D000623 ORTHO05D007511 7.9e-49 197.6 277 39.7
Cfa018225 Carpinus fangiana HOM05D000623 ORTHO05D007511 1.0e-48 197.2 293 41.0
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 1.0e-48 197.2 267 39.7
FAN24G1150 Fragaria x ananassa HOM05D000623 ORTHO05D007511 1.0e-48 197.2 293 38.6
FAN24G1792 Fragaria x ananassa HOM05D000623 ORTHO05D007511 1.0e-48 197.2 293 38.6
Sed0020468 Sechium edule HOM05D000623 ORTHO05D007511 1.0e-48 197.2 294 39.1
Cpa.g.sc66.112 Carica papaya HOM05D000623 ORTHO05D007511 1.8e-48 196.4 293 39.2
Ciclev10000997m.g Citrus clementina HOM05D000623 ORTHO05D007511 1.8e-48 196.4 293 37.9
SGA_v2.0_scaffold24G10520 Striga asiatica HOM05D000623 ORTHO05D007511 1.8e-48 196.4 278 41.7
Aqoxy5G02492 Aquilegia oxysepala HOM05D000623 ORTHO05D007511 3.9e-48 195.3 293 38.9
Psat6g188400 Pisum sativum HOM05D000623 ORTHO05D007511 3.9e-48 195.3 293 40.6
Ca_10632_v3 Cicer arietinum L. HOM05D000623 ORTHO05D007511 5.1e-48 194.9 293 40.6
CsaV3_7G021650 Cucumis sativus L. HOM05D000623 ORTHO05D007511 5.1e-48 194.9 294 40.1
FvH4_2g12430 Fragaria vesca HOM05D000623 ORTHO05D007511 5.1e-48 194.9 293 38.2
unitig_899.g15222 Utricularia gibba HOM05D000623 ORTHO05D007511 5.1e-48 194.9 294 39.1
FAN27G3484 Fragaria x ananassa HOM05D000623 ORTHO05D007511 6.7e-48 194.5 293 38.2
Phvul.007G087100 Phaseolus vulgaris HOM05D000623 ORTHO05D007511 6.7e-48 194.5 293 39.6
CiPaw.16G005500 Carya illinoinensis HOM05D000623 ORTHO05D007511 8.7e-48 194.1 293 37.9
Manes.02G188600 Manihot esculenta HOM05D000623 ORTHO05D007511 8.7e-48 194.1 293 39.6
Manes.18G098000 Manihot esculenta HOM05D000623 ORTHO05D007511 1.5e-47 193.4 293 39.2
Potri.019G086800 Populus trichocarpa HOM05D000623 ORTHO05D007511 2.5e-47 192.6 293 39.2
CDE04G1785 Ceratophyllum demersum HOM05D000623 ORTHO05D007511 3.3e-47 192.2 293 38.2
PGR142G0062 Punica granatum HOM05D000623 ORTHO05D007511 9.6e-47 190.7 293 36.9
HanXRQChr09g0258371 Helianthus annuus HOM05D000623 ORTHO05D007511 1.3e-46 190.3 295 37.6
Thecc.08G199200 Theobroma cacao HOM05D000623 ORTHO05D007511 1.6e-46 189.9 294 38.4
PSO761G0057 Papaver somniferum HOM05D000623 ORTHO05D007511 2.8e-46 189.1 293 38.9
PSO210G4952 Papaver somniferum HOM05D000623 ORTHO05D007511 3.7e-46 188.7 293 39.2
ClCG09G010660 Citrullus lanatus HOM05D000623 ORTHO05D007511 4.8e-46 188.3 316 37.0
MSTRG.1493 Avicennia marina HOM05D000623 ORTHO05D007511 8.1e-46 187.6 295 38.0
Lalb_Chr02g0141711 Lupinus albus HOM05D000623 ORTHO05D007511 1.4e-45 186.8 293 39.9
Medtr1g097090 Medicago truncatula HOM05D000623 ORTHO05D007511 1.4e-45 186.8 289 40.5
ECA232G0768 Erigeron canadensis HOM05D000623 ORTHO05D007511 2.4e-45 186.0 293 37.9
Sc01g0001630 Simmondsia chinensis HOM05D000623 ORTHO05D007511 6.9e-45 184.5 293 36.2
Duzib177G0453 Durio zibethinus HOM05D000623 ORTHO05D007511 9.0e-45 184.1 293 36.2
EL10Ac1g00054 Beta vulgaris HOM05D000623 ORTHO05D007511 1.2e-44 183.7 293 36.9
SHI09184 Sapria himalayana HOM05D000623 ORTHO05D007511 2.6e-44 182.6 292 37.3
ATR0767G132 Amborella trichopoda HOM05D000623 ORTHO05D007511 3.4e-44 182.2 293 36.9
Gohir.A02G061400 Gossypium hirsutum HOM05D000623 ORTHO05D007511 3.4e-44 182.2 293 37.5
Lalb_Chr21g0305681 Lupinus albus HOM05D000623 ORTHO05D007511 3.4e-44 182.2 309 38.2
Rhsim06G0110400 Rhododendron simsii HOM05D000623 ORTHO05D007511 4.5e-44 181.8 293 38.2
Gohir.D02G067000 Gossypium hirsutum HOM05D000623 ORTHO05D007511 7.6e-44 181.0 293 37.2
Gorai.005G075900 Gossypium raimondii HOM05D000623 ORTHO05D007511 7.6e-44 181.0 293 37.2
Ah.05g172810 Amaranthus hybridus HOM05D000623 ORTHO05D007511 1.3e-43 180.3 293 36.9
Aqoxy6G02733 Aquilegia oxysepala HOM05D000623 ORTHO05D007511 4.9e-43 178.3 293 36.2
THA.LOC104816228 Tarenaya hassleriana HOM05D000623 ORTHO05D007511 6.4e-43 177.9 291 37.1
Lsat_1_v5_gn_8_117301 Lactuca sativa HOM05D000623 ORTHO05D007511 4.2e-42 175.3 294 35.7
Atru.chr13.1870 Acer truncatum HOM05D000623 ORTHO05D007511 2.7e-41 172.6 301 35.5
A09p32170 Brassica napus HOM05D000623 ORTHO05D007511 6.0e-41 171.4 289 36.3
AL1G48850 Arabidopsis lyrata HOM05D000623 ORTHO05D007511 1.8e-40 169.9 292 36.0
BraA09t38763Z Brassica rapa HOM05D000623 ORTHO05D007511 1.8e-40 169.9 301 33.6
BcaC08g43791 Brassica carinata HOM05D000623 ORTHO05D007511 3.9e-40 168.7 293 34.8
BolC6t36301H Brassica oleracea HOM05D000623 ORTHO05D007511 3.9e-40 168.7 293 34.8
C06p11760 Brassica napus HOM05D000623 ORTHO05D007511 6.7e-40 167.9 293 34.8
Carub.0001s3244 Capsella rubella HOM05D000623 ORTHO05D007511 1.9e-39 166.4 292 34.6
A08p08310 Brassica napus HOM05D000623 ORTHO05D007511 5.6e-39 164.9 292 34.6
BraA08t32848Z Brassica rapa HOM05D000623 ORTHO05D007511 5.6e-39 164.9 292 34.6
Thhalv10007515m.g Eutrema salsugineum HOM05D000623 ORTHO05D007511 9.6e-39 164.1 292 34.6
Sp1g29510 Schrenkiella parvula HOM05D000623 ORTHO05D007511 1.6e-38 163.3 292 34.6
Zm00001eb433370 Zea mays HOM05D000623 ORTHO05D007511 2.8e-38 162.5 293 34.1
Lj7A305T42 Lonicera japonica HOM05D000623 ORTHO05D007511 6.2e-38 161.4 271 35.8
BcaB07g33142 Brassica carinata HOM05D000623 ORTHO05D007511 8.2e-38 161.0 295 35.3
AT1G34270 Arabidopsis thaliana HOM05D000623 ORTHO05D007511 3.1e-37 159.1 292 33.9
BolC8t47869H Brassica oleracea HOM05D000623 ORTHO05D007511 1.2e-36 157.1 292 33.6
Aa31LG6G8380 Aethionema arabicum HOM05D000623 ORTHO05D007511 5.8e-36 154.8 292 33.6
AUR62023595 Chenopodium quinoa HOM05D000623 ORTHO05D007511 6.5e-35 151.4 274 33.2
Glyma.10G218200 Glycine max HOM05D000623 ORTHO05D007511 7.9e-33 144.4 86 74.4
COL.COLO4_36789 Corchorus olitorius HOM05D000623 ORTHO05D007511 1.3e-32 143.7 263 34.6
RcHm_v2.0_Chr6g0272591 Rosa chinensis HOM05D000623 ORTHO05D007511 6.7e-32 141.4 265 32.8
BcaB04g17890 Brassica carinata HOM05D000623 ORTHO05D007511 1.5e-31 140.2 254 33.5
SEGI_29993 Sequoiadendron giganteum HOM05D000623 ORTHO05D007511 1.3e-27 127.1 240 31.7
CARHR033760 Cardamine hirsuta HOM05D000623 ORTHO05D007511 2.1e-25 119.8 270 30.0
vmacro12516 Vaccinium macrocarpon HOM05D000623 ORTHO05D007511 2.1e-25 119.8 209 35.4
SMO347G0143 Selaginella moellendorffii HOM05D000623 ORTHO05D007511 4.6e-25 118.6 294 28.9
Potri.013G116200 Populus trichocarpa HOM05D000623 ORTHO05D007511 2.5e-23 112.8 84 65.5
Sabra19G0097300 Salix brachista HOM05D000623 ORTHO05D007511 2.8e-22 109.4 129 48.8
AagrBONN_evm.TU.Sc2ySwM_117.3640 Anthoceros agrestis HOM05D000623 ORTHO05D007511 4.8e-22 108.6 295 26.1
HPP92_002269 Vanilla planifolia HOM05D000623 ORTHO05D007511 1.8e-21 106.7 84 60.7
CAN.G571.7 Capsicum annuum HOM05D000623 ORTHO05D007511 1.7e-19 100.1 70 72.9
VMungo0251G2955 Vigna mungo HOM05D001439 ORTHO05D002726 5.5e-18 95.1 62 66.1
SMO145G0244 Selaginella moellendorffii HOM05D000623 ORTHO05D007511 3.6e-17 92.4 292 24.7
AL8G14590 Arabidopsis lyrata HOM05D000623 ORTHO05D005779 1.0e-08 64.3 239 24.7
Glyma.07G220600 Glycine max HOM05D000623 ORTHO05D005779 3.9e-08 62.4 277 23.5
GSVIVG01036826001 Vitis vinifera HOM05D000623 ORTHO05D007511 3.9e-08 62.4 45 64.4
AagrBONN_evm.TU.Sc2ySwM_117.2173 Anthoceros agrestis HOM05D000623 ORTHO05D005779 8.8e-08 61.2 85 35.3
arahy.Tifrunner.gnm1.ann1.VF7QK5 Arachis hypogaea HOM05D000623 ORTHO05D005109 7.4e-07 58.2 55 49.1
CsaV3_1G046190 Cucumis sativus L. HOM05D000623 ORTHO05D005779 1.7e-06 57.0 262 22.5
Eucgr.B03487 Eucalyptus grandis HOM05D000623 ORTHO05D005109 1.7e-06 57.0 55 45.5
Hma1.2p1_0275F.1_g110830 Hydrangea macrophylla HOM05D000623 ORTHO05D005109 1.7e-06 57.0 56 46.4
VMungo0251G1862 Vigna mungo HOM05D000623 ORTHO05D005109 2.2e-06 56.6 55 45.5
arahy.Tifrunner.gnm1.ann1.CZS8FP Arachis hypogaea HOM05D000623 ORTHO05D005109 2.8e-06 56.2 55 47.3
Lj4g0013771 Lotus japonicus HOM05D000623 ORTHO05D005779 3.7e-06 55.8 47 53.2
Sp2g09750 Schrenkiella parvula HOM05D000623 ORTHO05D005779 3.7e-06 55.8 276 22.5
arahy.Tifrunner.gnm1.ann1.2FBG5I Arachis hypogaea HOM05D000623 ORTHO05D005779 4.8e-06 55.5 47 53.2
arahy.Tifrunner.gnm1.ann1.3P2HKF Arachis hypogaea HOM05D000623 ORTHO05D005779 4.8e-06 55.5 47 53.2
Carub.0002s1374 Capsella rubella HOM05D000623 ORTHO05D005109 4.8e-06 55.5 51 47.1
Glyma.20G019000 Glycine max HOM05D000623 ORTHO05D005779 4.8e-06 55.5 47 53.2
Potri.012G124600 Populus trichocarpa HOM05D000623 ORTHO05D005779 4.8e-06 55.5 86 37.2
QL93p1842_0038 Quercus lobata HOM05D000623 ORTHO05D005779 4.8e-06 55.5 168 28.0
Sed0008010 Sechium edule HOM05D000623 ORTHO05D005779 4.8e-06 55.5 262 22.9
vmacro01065 Vaccinium macrocarpon HOM05D000623 ORTHO05D005109 4.8e-06 55.5 57 42.1
Atru.chr11.2310 Acer truncatum HOM05D000623 ORTHO05D005109 6.3e-06 55.1 55 43.6
Actinidia33679 Actinidia chinensis HOM05D000623 ORTHO05D005779 6.3e-06 55.1 70 41.4
VMungo0251G2928 Vigna mungo HOM05D000623 ORTHO05D005779 6.3e-06 55.1 47 51.1
CAN.G149.14 Capsicum annuum HOM05D000623 ORTHO05D005779 8.2e-06 54.7 58 43.1
MBI02_g35826_MAGBIO Magnolia biondii HOM05D000623 ORTHO05D005779 8.2e-06 54.7 83 37.3
Solyc03g044880.4 Solanum lycopersicum HOM05D000623 ORTHO05D005109 8.2e-06 54.7 47 51.1
Sopen03g009170 Solanum pennellii HOM05D000623 ORTHO05D005109 8.2e-06 54.7 47 51.1


User provided reference genes

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